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LEF-8

Euk-Vir

Spodoptera_littoralis_nucleopolyhedrovirus

LEF-8__YP_009505843__Spodoptera_littoralis_nucleopolyhedrovirus__10456

Identity

Accession:: YP_009505843 ↗
Protein ID:: LEF-8
Kingdom:: euk

Quality

72.3 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Spodoptera_littoralis_nucleopolyhedrovirus

TaxID: 10456

Cluster

View cluster (46 members)

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 125-230

PDB

Domain cluster: rep: LEF-8__YP_009345850__Mythimna_unipuncta_granulovirus_B__2169746__D102-211

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04941.18 best	LEF-8	164.0	7.30e-48	100.0%	14.2%

D2 high residues 396-535

PDB

Domain cluster: rep: Late_expression_facto_8__YP_009666455__Lonomia_obliqua_multiple_nucleopolyhedrovirus__134394__D385-515

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04941.18 best	LEF-8	131.4	5.20e-38	100.0%	17.4%

D3 high residues 639-752

PDB

Domain cluster: rep: late_expression_factor-8__YP_025188__Neodiprion_sertifer_nucleopolyhedrovirus__111874__D585-690

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04941.18 best	LEF-8	109.5	2.30e-31	100.0%	15.3%

D4 medium residues 1-79_98-121_244-271_289-320

PDB

Domain cluster: rep: lef-8__YP_009513164__Agrotis_segetum_granulovirus__10464__D3-99_217-314

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04941.18 best	LEF-8	111.2	6.70e-32	61.4%	13.3%
PF04941.18	LEF-8	38.7	5.60e-10	37.4%	8.9%

D5 medium residues 321-394

PDB

D6 medium residues 539-593

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04941.18 best	LEF-8	50.2	1.90e-13	94.5%	5.2%

D7 medium residues 594-638_758-851

PDB

Domain cluster: rep: KU935715.1__AND75470.1__ME3_309__00309__D264-326_420-534

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04941.18 best	LEF-8	50.8	1.30e-13	33.1%	6.2%
PF04941.18	LEF-8	38.9	4.90e-10	21.6%	3.7%

D8 medium residues 852-911

PDB