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LH2
Euk-VirBovine_adenovirus_6
LH2__YP_007346995__Bovine_adenovirus_6__111167
Identity
- Accession:
- YP_007346995 ↗
- Protein ID:
- LH2
- Kingdom:
- euk
Quality
89.6
mean pLDDT
Taxonomy
Bamfordvirae›
Preplasmiviricota›
Pharingeaviricetes›
Rowavirales›
Adenoviridae›
Barthadenovirus›
Bovine_adenovirus_6
TaxID: 111167
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-119
Domain cluster:
rep: protein_LH2__YP_009051651__Lizard_adenovirus_2__874272__D9-30_43-131
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6tqpA01 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.73 | 67.0 | 6.32e-01 | 100.0% | 87.5% |
| 2aboA00 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.72 | 65.0 | 6.23e-01 | 100.0% | 90.1% |
| 2kbwA01 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.71 | 64.0 | 5.80e-01 | 100.0% | 81.0% |
| 2imsA00 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.70 | 62.0 | 5.55e-01 | 100.0% | 86.5% |
| 4lqkA00 | 1.10.437.20 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › dsDNA poxvirus | 0.65 | 53.0 | 5.10e-01 | 100.0% | 77.3% |
| 2vvwA00 | 1.10.437.20 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › dsDNA poxvirus | 0.64 | 58.0 | 5.31e-01 | 100.0% | 75.3% |
| 4qunA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.53 | 44.0 | 3.37e-01 | 92.9% | 89.8% |
| 4cs9B02 | 1.20.120.1350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Pneumovirus matrix protein 2 (M2), zinc-binding domain | 0.51 | 30.0 | 3.12e-01 | 71.7% | 60.7% |
| 3hl6A02 | 1.20.58.700 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.50 | 34.0 | 3.42e-01 | 100.0% | 67.0% |
| 7qocA01 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.50 | 41.0 | 3.57e-01 | 91.2% | 75.9% |
| 8ex5A02 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.50 | 43.0 | 3.56e-01 | 98.2% | 82.0% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4143825 | 5046.1.1.123 ↗ | extended segments › F-type ATP synthase subunit b › F-type ATP synthase subunit b › F-type ATP synthase subunit b › OSCP | 0.55 | 38.0 | 2.74e-01 | 72.6% | 49.2% |
| 3167639 | 109.4.1.317 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Med5 | 0.54 | 39.0 | 3.26e-01 | 75.2% | 68.1% |
| 4028590 | 109.46.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Helical domain in TOPLESS related protein 2 (TPR2) › Helical domain in TOPLESS related protein 2 (TPR2) › CTLH | 0.51 | 33.0 | 3.27e-01 | 99.1% | 60.0% |
| 3542116 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.51 | 42.0 | 3.50e-01 | 94.7% | 81.4% |