←Back to structures
LN681534.1__CEK40247.1__PHICD2401_20033__00036
Bact-VirLN681534.1__CEK40247.1__PHICD2401_20033__00036
Identity
- Accession:
- LN681534 ↗
- Kingdom:
- phage
Quality
87.6
mean pLDDT
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-54
Domain cluster:
rep: OR574845.1__WQZ00100.1__CS5676_0032__00031__D6-56
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1yfbA00 | 2.10.260.10 | Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › | 0.83 | 64.0 | 6.18e-01 | 100.0% | 75.0% |
| 1mvfD00 | 2.10.260.10 | Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › | 0.79 | 62.0 | 6.35e-01 | 100.0% | 93.2% |
| 1ub4C00 | 2.10.260.10 | Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › | 0.77 | 60.0 | 5.21e-01 | 100.0% | 54.7% |
| 3tndB01 | 2.10.260.10 | Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › | 0.75 | 56.0 | 5.89e-01 | 100.0% | 92.7% |
| 3o27B00 | 2.10.260.10 | Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › | 0.68 | 53.0 | 5.06e-01 | 100.0% | 73.7% |
| 2wpvE00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.57 | 34.0 | 2.10e-01 | 70.2% | 10.0% |
| 2xzsA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.56 | 40.0 | 3.40e-01 | 80.9% | 52.7% |
| 1z9hA01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.55 | 32.0 | 2.76e-01 | 72.3% | 30.0% |
| 2kyyA00 | 3.30.950.30 | Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Schlafen, AAA domain | 0.55 | 37.0 | 2.69e-01 | 70.2% | 56.2% |
| 2jkgA00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.54 | 40.0 | 2.90e-01 | 87.2% | 62.4% |
| 1k3sA00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.54 | 44.0 | 3.54e-01 | 100.0% | 75.9% |
| 5jzjA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.52 | 41.0 | 3.35e-01 | 91.5% | 48.9% |
| 3f9uA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.51 | 36.0 | 2.70e-01 | 80.9% | 81.4% |
| 2clqA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.51 | 36.0 | 3.15e-01 | 80.9% | 48.2% |
ECOD (50)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4990060 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.88 | 68.0 | 6.98e-01 | 100.0% | 88.6% |
| 4986319 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.85 | 57.0 | 5.60e-01 | 72.3% | 66.0% |
| 5027484 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.84 | 66.0 | 6.80e-01 | 100.0% | 91.1% |
| 5071519 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.83 | 62.0 | 5.57e-01 | 100.0% | 58.5% |
| 4993116 | 1.1.3.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MraZ | 0.83 | 60.0 | 5.97e-01 | 100.0% | 74.0% |
| 5072446 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.83 | 62.0 | 5.71e-01 | 100.0% | 63.3% |
| 4085449 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.83 | 66.0 | 5.60e-01 | 100.0% | 54.7% |
| 4930879 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.83 | 66.0 | 6.55e-01 | 100.0% | 84.0% |
| 5001623 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.83 | 66.0 | 6.55e-01 | 100.0% | 84.0% |
| 4933873 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.82 | 66.0 | 6.33e-01 | 100.0% | 76.4% |
| 5074248 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.82 | 60.0 | 5.78e-01 | 100.0% | 69.1% |
| 5059101 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.81 | 64.0 | 6.54e-01 | 100.0% | 91.1% |
| 5065458 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.81 | 60.0 | 5.57e-01 | 100.0% | 63.3% |
| 4966249 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.81 | 60.0 | 6.16e-01 | 100.0% | 84.4% |
| 4991794 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.81 | 65.0 | 6.41e-01 | 100.0% | 84.0% |
| 4639978 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.80 | 60.0 | 5.69e-01 | 100.0% | 69.1% |
| 4955687 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.80 | 58.0 | 5.60e-01 | 100.0% | 69.8% |
| 4993713 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.80 | 59.0 | 5.63e-01 | 100.0% | 69.1% |
| 5031362 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.80 | 59.0 | 5.47e-01 | 100.0% | 63.3% |
| 4993826 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.80 | 63.0 | 6.31e-01 | 100.0% | 85.4% |
| 5027722 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.80 | 64.0 | 6.51e-01 | 100.0% | 93.3% |
| 5031005 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.79 | 59.0 | 5.63e-01 | 100.0% | 69.1% |
| 4982519 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.78 | 57.0 | 5.69e-01 | 100.0% | 76.0% |
| 4966339 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.78 | 59.0 | 5.46e-01 | 100.0% | 65.0% |
| 3503896 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.78 | 60.0 | 6.17e-01 | 100.0% | 91.1% |
| 4993775 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.77 | 58.0 | 5.56e-01 | 100.0% | 70.9% |
| 5030593 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.77 | 58.0 | 5.54e-01 | 100.0% | 70.9% |
| 4936825 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.77 | 53.0 | 5.20e-01 | 74.5% | 68.0% |
| 5014382 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.76 | 57.0 | 4.93e-01 | 100.0% | 52.0% |
| 4967853 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.76 | 55.0 | 5.33e-01 | 100.0% | 69.1% |
| 4947224 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.76 | 61.0 | 6.02e-01 | 100.0% | 86.0% |
| 4937994 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.75 | 55.0 | 5.77e-01 | 100.0% | 95.0% |
| 4941025 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.74 | 55.0 | 5.54e-01 | 100.0% | 81.6% |
| 5031215 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.74 | 55.0 | 5.26e-01 | 100.0% | 69.1% |
| 4992541 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.74 | 56.0 | 5.16e-01 | 100.0% | 63.1% |
| 4969278 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.73 | 53.0 | 5.46e-01 | 100.0% | 84.4% |
| 4534384 | 1.1.3.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › SymE_toxin | 0.73 | 60.0 | 5.88e-01 | 100.0% | 87.0% |
| 5059110 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.73 | 56.0 | 5.70e-01 | 100.0% | 88.9% |
| 4967881 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.72 | 53.0 | 5.16e-01 | 100.0% | 72.2% |
| 5073758 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.68 | 49.0 | 5.05e-01 | 100.0% | 84.4% |
| 352168 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.68 | 50.0 | 4.82e-01 | 100.0% | 69.1% |
| 1954221 | 2.26.1.1 ↗ | beta barrels › OB-fold › Arcadin-1 › Arcadin-1 › Arcadin_1 | 0.65 | 46.0 | 3.98e-01 | 76.6% | 49.3% |
| 4967502 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.65 | 46.0 | 4.74e-01 | 100.0% | 84.4% |
| 4992628 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.63 | 47.0 | 4.59e-01 | 100.0% | 72.7% |
| 3451717 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.63 | 52.0 | 4.44e-01 | 100.0% | 55.3% |
| 3440138 | 1.1.11.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain | 0.62 | 50.0 | 4.40e-01 | 100.0% | 58.7% |
| 3505182 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.55 | 42.0 | 3.60e-01 | 100.0% | 50.0% |
| 3393445 | 217.1.1.1 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_5 | 0.53 | 40.0 | 2.80e-01 | 100.0% | 82.7% |
| 3272533 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.52 | 37.0 | 2.26e-01 | 76.6% | 44.3% |
| 3797433 | 60.1.2.0 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain | 0.51 | 40.0 | 2.55e-01 | 95.7% | 46.1% |