←Back to structures
LN681536.1__CEK40375.1__PHICD146_20046__00046
Bact-VirLN681536.1__CEK40375.1__PHICD146_20046__00046
Identity
- Accession:
- LN681536 ↗
- Kingdom:
- phage
Quality
87.9
mean pLDDT
Taxonomy
TaxID: 1582151
Cluster
View cluster (10 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 25-80
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2hxiA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.63 | 50.0 | 4.83e-01 | 96.4% | 81.2% |
| 2doeA00 | 1.10.10.440 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain | 0.63 | 50.0 | 4.47e-01 | 98.2% | 61.4% |
| 2r18A02 | 1.10.8.880 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Birnavirus VP3 protein, domain 2 | 0.62 | 39.0 | 3.92e-01 | 75.0% | 61.0% |
| 1zq3P00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.60 | 45.0 | 4.31e-01 | 96.4% | 69.1% |
| 3hr0B01 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.58 | 39.0 | 3.53e-01 | 76.8% | 50.6% |
| 2yrnA01 | 1.10.418.10 | Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Calponin-like domain | 0.58 | 41.0 | 3.28e-01 | 78.6% | 74.4% |
| 4a0zA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 42.0 | 4.17e-01 | 100.0% | 81.4% |
| 4wz9A02 | 1.10.390.10 | Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2 | 0.54 | 43.0 | 2.95e-01 | 96.4% | 40.2% |
| 4zbwA02 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.54 | 40.0 | 3.49e-01 | 80.4% | 72.4% |
| 6azyA01 | 1.10.1780.10 | Mainly Alpha › Orthogonal Bundle › Double Clp-N motif › Clp, N-terminal domain | 0.54 | 37.0 | 2.97e-01 | 75.0% | 64.9% |
| 2i7uA00 | 6.10.250.1010 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.52 | 35.0 | 3.47e-01 | 75.0% | 64.5% |
| 3fajA00 | 1.20.120.950 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Uncharacterised protein DUF5062 | 0.51 | 42.0 | 3.57e-01 | 96.4% | 88.1% |
| 2psmA00 | 1.20.1250.70 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › Interleukin-15/Interleukin-21 | 0.51 | 39.0 | 3.29e-01 | 94.6% | 90.6% |
| 2ah5A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.50 | 39.0 | 3.82e-01 | 92.9% | 84.6% |
| 3ag7A00 | 1.10.287.110 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain | 0.50 | 38.0 | 3.25e-01 | 89.3% | 75.2% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4424455 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.66 | 53.0 | 5.22e-01 | 94.6% | 85.0% |
| 3960008 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.61 | 44.0 | 4.09e-01 | 91.1% | 61.4% |
| 2897 | 101.1.17.2 ↗ | alpha arrays › HTH › HTH › FF domain › FF | 0.57 | 45.0 | 4.35e-01 | 100.0% | 77.1% |
| 5009867 | 601.7.1.2 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HEPN | 0.57 | 41.0 | 3.48e-01 | 83.9% | 46.4% |
| 4026735 | 148.1.1.1 ↗ | alpha arrays › Histone-like › Histone-related › Histone › Histone | 0.56 | 42.0 | 3.36e-01 | 82.1% | 40.9% |
| 3574580 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.54 | 41.0 | 3.59e-01 | 87.5% | 78.9% |
| 3341577 | 101.1.17.2 ↗ | alpha arrays › HTH › HTH › FF domain › FF | 0.54 | 43.0 | 4.23e-01 | 96.4% | 83.1% |
| 3587302 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 43.0 | 3.96e-01 | 100.0% | 68.8% |
| 3796415 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.52 | 40.0 | 3.89e-01 | 87.5% | 76.9% |
D2
high
residues 84-214
Domain cluster:
rep: IMGVR_UViG_3300025859_001166-3300025859-Ga0209096_100026138__D12-148