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LR535913.1__VFR13618.1__SPFM15_00001__00001
Bact-VirLR535913.1__VFR13618.1__SPFM15_00001__00001
Identity
- Accession:
- LR535913 ↗
- Kingdom:
- phage
Quality
75.9
mean pLDDT
Taxonomy
TaxID: 2528685
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-34
Domain cluster:
representative
CATH (50)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4kqdB00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.73 | 55.0 | 3.80e-01 | 82.4% | 28.4% |
| 1whqA01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.70 | 51.0 | 4.19e-01 | 82.4% | 39.4% |
| 2v8qB00 | 6.20.250.60 | Special › Other non-globular › Double Stranded RNA Binding Domain › | 0.69 | 47.0 | 3.87e-01 | 76.5% | 35.6% |
| 4i1sB00 | 4.10.80.340 | Few Secondary Structures › Irregular › Rhinovirus 14, subunit 4 › | 0.69 | 52.0 | 4.65e-01 | 88.2% | 82.7% |
| 4pkcC00 | 6.20.90.20 | Special › Other non-globular › SH3 type barrels. › Benzylsuccinate synthase gamma subunit | 0.68 | 48.0 | 4.60e-01 | 79.4% | 63.4% |
| 3o2iA00 | 3.30.70.2710 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.68 | 46.0 | 3.46e-01 | 70.6% | 25.8% |
| 2qlvB02 | 2.20.25.290 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.68 | 46.0 | 4.57e-01 | 76.5% | 65.8% |
| 4c89C00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.67 | 46.0 | 2.64e-01 | 70.6% | 7.4% |
| 1ti2B01 | 3.30.70.20 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 49.0 | 3.36e-01 | 85.3% | 26.3% |
| 2ecfA01 | 2.140.10.30 | Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain | 0.65 | 51.0 | 2.89e-01 | 91.2% | 12.5% |
| 6kd0A01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.64 | 47.0 | 2.81e-01 | 88.2% | 9.3% |
| 3maeA00 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.63 | 43.0 | 2.68e-01 | 73.5% | 10.7% |
| 3tghA00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.63 | 51.0 | 2.98e-01 | 94.1% | 64.1% |
| 3d03A01 | 3.60.21.40 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › GpdQ, catalytic alpha/beta sandwich domain | 0.63 | 44.0 | 3.08e-01 | 79.4% | 84.0% |
| 3aonA00 | 1.10.287.3240 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.63 | 47.0 | 3.07e-01 | 88.2% | 16.5% |
| 2qrdB01 | 2.20.25.290 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.62 | 43.0 | 4.27e-01 | 79.4% | 70.3% |
| 5ip4E00 | 3.10.20.230 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Doublecortin domain | 0.61 | 43.0 | 3.43e-01 | 79.4% | 32.1% |
| 1gkkA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.60 | 43.0 | 2.59e-01 | 82.4% | 9.9% |
| 4ozjA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 41.0 | 3.05e-01 | 76.5% | 91.3% |
| 1r61A00 | 3.50.30.50 | Alpha Beta › 3-Layer(bba) Sandwich › Glucose Oxidase; domain 1 › Putative cyclase | 0.59 | 43.0 | 2.73e-01 | 76.5% | 13.7% |
| 1y4uB01 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.59 | 41.0 | 2.64e-01 | 76.5% | 87.1% |
| 2bhgA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.59 | 42.0 | 3.32e-01 | 88.2% | 34.8% |
| 2yxdA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.59 | 43.0 | 2.90e-01 | 97.1% | 18.4% |
| 3k0yA02 | 2.60.40.2370 | Mainly Beta › Sandwich › Immunoglobulin-like › NigD-like, C-terminal beta sandwich domain | 0.58 | 45.0 | 3.14e-01 | 85.3% | 21.8% |
| 2sliA03 | 2.40.220.10 | Mainly Beta › Beta Barrel › Intramolecular trans-sialidase; domain 3 › Intramolecular Trans-sialidase; Domain 3 | 0.58 | 43.0 | 3.17e-01 | 73.5% | 26.0% |
| 5b55A01 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.58 | 41.0 | 2.69e-01 | 79.4% | 15.8% |
| 1l3iA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.58 | 41.0 | 2.81e-01 | 97.1% | 17.3% |
| 3ks7A02 | 2.60.120.230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.58 | 40.0 | 2.73e-01 | 88.2% | 79.3% |
| 3p9aF00 | 1.10.132.80 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › | 0.57 | 43.0 | 3.08e-01 | 94.1% | 52.2% |
| 2hj1A00 | 3.10.20.280 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › RnfH-like | 0.57 | 41.0 | 3.30e-01 | 70.6% | 31.2% |
| 3bxpB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.57 | 41.0 | 2.54e-01 | 88.2% | 11.1% |
| 1bqsA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 43.0 | 3.21e-01 | 97.1% | 27.7% |
| 2kvtA00 | 3.30.730.30 | Alpha Beta › 2-Layer Sandwich › GCC-box Binding Domain › YaiA protein | 0.56 | 40.0 | 3.31e-01 | 85.3% | 39.4% |
| 1b35B00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 43.0 | 2.69e-01 | 100.0% | 64.7% |
| 1xexB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 38.0 | 2.60e-01 | 82.4% | 16.1% |
| 2qzbA00 | 2.60.460.10 | Mainly Beta › Sandwich › protein yfey like fold › protein yfey like domain | 0.55 | 38.0 | 2.59e-01 | 73.5% | 16.6% |
| 6vq6H01 | 1.10.287.3240 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.55 | 39.0 | 2.60e-01 | 91.2% | 15.2% |
| 3wgtA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 42.0 | 2.77e-01 | 88.2% | 60.6% |
| 2nq2D00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 38.0 | 2.32e-01 | 70.6% | 9.7% |
| 3h6qA00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.54 | 38.0 | 2.59e-01 | 82.4% | 16.7% |
| 3jtzA00 | 3.30.160.390 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Integrase, DNA-binding domain | 0.54 | 41.0 | 3.29e-01 | 70.6% | 31.2% |
| 4lgvD02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.53 | 37.0 | 2.34e-01 | 79.4% | 78.9% |
| 2b9dA01 | 3.30.160.330 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.53 | 37.0 | 3.69e-01 | 79.4% | 64.1% |
| 4q1vA01 | 2.140.10.30 | Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain | 0.53 | 37.0 | 2.17e-01 | 91.2% | 17.9% |
| 3e0jB00 | 3.90.1030.20 | Alpha Beta › Alpha-Beta Complex › 50s Ribosomal Protein L17; Chain: A, › DNA polymerase delta, p66 (Cdc27) subunit, wHTH domain | 0.52 | 36.0 | 2.64e-01 | 88.2% | 65.0% |
| 3ksrA01 | 6.20.370.100 | Special › Other non-globular › Rhinovirus 14, subunit 4 › | 0.52 | 35.0 | 3.51e-01 | 79.4% | 100.0% |
| 3bzwF00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.52 | 38.0 | 2.38e-01 | 94.1% | 14.8% |
| 2fdoA00 | 3.30.1970.10 | Alpha Beta › 2-Layer Sandwich › AF2331-like fold › AF2331-like | 0.51 | 35.0 | 2.87e-01 | 100.0% | 31.2% |
| 3ue3A01 | 3.90.1310.10 | Alpha Beta › Alpha-Beta Complex › Penicillin-binding protein 2a (Domain 2) › Penicillin-binding protein 2a (Domain 2) | 0.51 | 38.0 | 2.98e-01 | 88.2% | 34.0% |
| 6xw5A01 | 2.40.510.10 | Mainly Beta › Beta Barrel › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Positive stranded ssRNA viruses | 0.50 | 36.0 | 2.49e-01 | 97.1% | 68.8% |
ECOD (62)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3370065 | 309.1.2.0 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › ThrRS/AlaRS editing domain | 0.91 | 70.0 | 4.72e-01 | 82.4% | 25.7% |
| 3857887 | 5094.1.1.11 ↗ | a+b duplicates or obligate multimers › OmpH-like › OmpH-like › OmpH-like › Fy-3 | 0.79 | 56.0 | 4.35e-01 | 76.5% | 34.7% |
| 3560901 | 601.19.1.20 ↗ | alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein › Fy-3 | 0.79 | 56.0 | 4.32e-01 | 76.5% | 34.7% |
| 3774738 | 7529.1.1.11 ↗ | a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › DUF2362 | 0.78 | 55.0 | 4.13e-01 | 76.5% | 30.6% |
| 5032176 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.78 | 63.0 | 5.23e-01 | 91.2% | 55.0% |
| 3905302 | 284.1.3.8 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › Fy-3 | 0.77 | 55.0 | 4.13e-01 | 76.5% | 30.6% |
| 4851691 | 10.1.1.39 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › bCoV_S1_N | 0.74 | 53.0 | 3.42e-01 | 79.4% | 15.4% |
| 5051696 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.74 | 56.0 | 4.87e-01 | 85.3% | 81.8% |
| 3587666 | 330.1.1.11 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DUF1071 | 0.73 | 52.0 | 3.50e-01 | 79.4% | 24.4% |
| 4055336 | 2003.1.5.73 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_16 | 0.73 | 56.0 | 3.41e-01 | 91.2% | 13.5% |
| 3001810 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.72 | 50.0 | 4.74e-01 | 73.5% | 59.5% |
| 3674227 | 11.1.5.7 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Adap_comp_sub | 0.72 | 51.0 | 3.60e-01 | 79.4% | 23.5% |
| 3701882 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.70 | 49.0 | 3.65e-01 | 82.4% | 27.4% |
| 3925690 | 284.1.3.0 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain | 0.70 | 50.0 | 4.00e-01 | 76.5% | 34.7% |
| 5027694 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.69 | 49.0 | 4.29e-01 | 73.5% | 46.3% |
| 3727070 | 206.1.1.15 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Fructosamin_kin | 0.69 | 49.0 | 2.95e-01 | 82.4% | 10.4% |
| 4187457 | 4967.1.1.6 ↗ | alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › Intron_maturas2 | 0.69 | 55.0 | 3.72e-01 | 91.2% | 23.1% |
| 3890772 | 263.1.1.0 ↗ | a+b three layers › SRF-like › SRF-like › SRF-like | 0.69 | 49.0 | 3.81e-01 | 70.6% | 32.0% |
| 3580898 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.68 | 48.0 | 3.20e-01 | 94.1% | 16.9% |
| 4848452 | 135.1.1.1 ↗ | alpha arrays › Transducin (alpha subunit), insertion domain › Transducin (alpha subunit), insertion domain › Transducin (alpha subunit), insertion domain › G-alpha | 0.68 | 46.0 | 4.21e-01 | 70.6% | 49.0% |
| 3879162 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.68 | 53.0 | 4.08e-01 | 94.1% | 36.7% |
| 3408021 | 3246.1.1.1 ↗ | few secondary structure elements › Disulfide-rich domain in A Disintegrin And Metalloprotease (ADAM) domain-containing proteins › Disulfide-rich domain in A Disintegrin And Metalloprotease (ADAM) domain-containing proteins › Disulfide-rich domain in A Disintegrin And Metalloprotease (ADAM) domain-containing proteins › ADAM_CR | 0.68 | 48.0 | 3.31e-01 | 85.3% | 20.8% |
| 5037750 | 3926.1.1.1 ↗ | alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D | 0.67 | 54.0 | 3.41e-01 | 91.2% | 15.9% |
| 5035417 | 3010.1.1.0 ↗ | a/b three-layered sandwiches › C-terminal subdomain in Lon-related proteases catalytic domains › C-terminal subdomain in Lon-related proteases catalytic domains › C-terminal subdomain in Lon-related proteases catalytic domains | 0.67 | 57.0 | 4.29e-01 | 100.0% | 40.0% |
| 4268884 | 387.1.1.0 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › omega toxin-related | 0.67 | 50.0 | 3.89e-01 | 82.4% | 63.6% |
| 4001707 | 284.1.3.0 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain | 0.67 | 46.0 | 3.61e-01 | 76.5% | 30.6% |
| 3491344 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.66 | 52.0 | 4.06e-01 | 97.1% | 41.7% |
| 4000368 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.66 | 52.0 | 3.20e-01 | 91.2% | 13.5% |
| 3995477 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.65 | 56.0 | 4.86e-01 | 100.0% | 61.8% |
| 3589192 | 101.1.1.68 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_38 | 0.64 | 49.0 | 3.79e-01 | 76.5% | 32.5% |
| 3798829 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.64 | 52.0 | 3.21e-01 | 94.1% | 17.8% |
| 3266052 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.63 | 47.0 | 3.17e-01 | 82.4% | 19.3% |
| 3636832 | 222.1.1.4 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT | 0.63 | 47.0 | 3.22e-01 | 100.0% | 19.4% |
| 4179803 | 4964.1.1.2 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › RNA_pol | 0.62 | 49.0 | 3.10e-01 | 91.2% | 23.5% |
| 4933528 | 3926.1.1.1 ↗ | alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D | 0.62 | 51.0 | 3.22e-01 | 91.2% | 14.8% |
| 5050683 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.62 | 44.0 | 3.14e-01 | 79.4% | 21.6% |
| 3365774 | 109.4.1.1560 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_3, E_motif | 0.62 | 43.0 | 2.50e-01 | 76.5% | 14.9% |
| 3891450 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.62 | 45.0 | 3.01e-01 | 79.4% | 16.9% |
| 4954522 | 878.1.1.1 ↗ | a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 › DUF3194 | 0.62 | 49.0 | 3.69e-01 | 82.4% | 29.8% |
| 3999786 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 45.0 | 3.98e-01 | 88.2% | 50.0% |
| 4238490 | 812.2.1.1 ↗ | a+b duplicates or obligate multimers › MinE-like › Cyanase C-terminal domain › Cyanase C-terminal domain › Cyanate_lyase | 0.61 | 43.0 | 3.67e-01 | 76.5% | 40.0% |
| 2755266 | 3709.1.1.1 ↗ | a+b two layers › ESX-1 secretion system protein eccB1 linker domains › ESX-1 secretion system protein eccB1 linker domains › ESX-1 secretion system protein eccB1 linker domains › T7SS_ESX1_EccB | 0.61 | 42.0 | 4.20e-01 | 76.5% | 68.4% |
| 3513009 | 5.1.12.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › PERK and Ire1 luminal domains | 0.61 | 47.0 | 2.88e-01 | 100.0% | 26.3% |
| 4967969 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.60 | 45.0 | 3.07e-01 | 97.1% | 32.1% |
| 3993949 | 284.1.1.0 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like | 0.60 | 43.0 | 4.09e-01 | 79.4% | 60.0% |
| 3691245 | 2008.1.1.27 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAI1 | 0.59 | 43.0 | 2.67e-01 | 85.3% | 13.7% |
| 4004145 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.59 | 42.0 | 2.65e-01 | 79.4% | 13.0% |
| 4988497 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.58 | 41.0 | 2.78e-01 | 79.4% | 16.4% |
| 4945700 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 45.0 | 3.13e-01 | 94.1% | 32.0% |
| 3723461 | 4099.1.1.9 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Med27 | 0.57 | 40.0 | 2.76e-01 | 73.5% | 17.2% |
| 3789255 | 3082.1.1.0 ↗ | extended segments › C-terminal region of nonsense mediated decay factor UPF2 › C-terminal region of nonsense mediated decay factor UPF2 › C-terminal region of nonsense mediated decay factor UPF2 | 0.57 | 47.0 | 2.68e-01 | 70.6% | 7.1% |
| 3743930 | 109.4.1.32 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MIF4G | 0.57 | 44.0 | 2.62e-01 | 70.6% | 8.1% |
| 3507995 | 2004.1.1.156 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 | 0.56 | 39.0 | 2.50e-01 | 76.5% | 80.5% |
| 3055859 | 5084.5.3.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel | 0.56 | 42.0 | 2.31e-01 | 100.0% | 7.9% |
| 4997007 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.55 | 40.0 | 3.39e-01 | 82.4% | 80.0% |
| 5049862 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.55 | 39.0 | 2.64e-01 | 88.2% | 24.6% |
| 3169451 | 109.4.1.3193 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HAT, Suf, HAT_Syf1_CNRKL1_C, HAT_Syf1_CNRKL1_N, HAT_PRP39_N | 0.54 | 38.0 | 2.12e-01 | 82.4% | 4.5% |
| 3201979 | 3082.1.1.1 ↗ | extended segments › C-terminal region of nonsense mediated decay factor UPF2 › C-terminal region of nonsense mediated decay factor UPF2 › C-terminal region of nonsense mediated decay factor UPF2 › Upf2 | 0.53 | 41.0 | 3.47e-01 | 76.5% | 38.5% |
| 3825435 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.53 | 37.0 | 2.56e-01 | 88.2% | 18.2% |
| 4344712 | 284.1.3.1 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › SNF5 | 0.53 | 40.0 | 2.96e-01 | 70.6% | 24.0% |
| 3888254 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 37.0 | 3.61e-01 | 76.5% | 57.8% |
| 3251044 | 242.1.1.2 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_2 | 0.52 | 42.0 | 2.79e-01 | 70.6% | 15.6% |