←Back to structures
LR595863.1__VUD36661.1__X__00022
Bact-VirLR595863.1__VUD36661.1__X__00022
Identity
- Accession:
- LR595863 ↗
- Kingdom:
- phage
Quality
86.6
mean pLDDT
Taxonomy
TaxID: 2686056
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 18-126
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13006.13 best | Nterm_IS4 | 119.0 | 1.10e-34 | 85.3% | 99.0% |
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7ml0M01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.58 | 41.0 | 4.58e-01 | 80.7% | 100.0% |
| 3c5iA02 | 3.90.1200.10 | Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe | 0.55 | 47.0 | 3.64e-01 | 99.1% | 80.3% |
| 3s2wG00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 45.0 | 4.25e-01 | 91.7% | 78.2% |
| 1uujA00 | 1.20.960.30 | Mainly Alpha › Up-down Bundle › Mitochondrial Import Receptor Subunit Tom20; Chain A › | 0.53 | 30.0 | 3.45e-01 | 94.5% | 77.6% |
| 1k87A02 | 1.10.2060.10 | Mainly Alpha › Orthogonal Bundle › PutA proline dehydrogenase (PRODH), domain 2 › PutA proline dehydrogenase (PRODH), domain 2 | 0.52 | 42.0 | 4.25e-01 | 88.1% | 89.0% |
| 2qg7B02 | 3.90.1200.10 | Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe | 0.51 | 44.0 | 3.42e-01 | 100.0% | 84.4% |
| 2pbiA02 | 1.10.1240.60 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › | 0.50 | 30.0 | 3.14e-01 | 96.3% | 62.4% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3985422 | 101.1.10.49 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Nterm_IS4 | 0.98 | 83.0 | 8.92e-01 | 87.2% | 100.0% |
| 4008208 | 101.1.1.468 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Nterm_IS4 | 0.81 | 61.0 | 6.87e-01 | 80.7% | 100.0% |
| 4034131 | 101.1.1.248 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF772 | 0.65 | 54.0 | 5.53e-01 | 89.9% | 95.2% |
| 3639027 | 101.1.1.116 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Abp2 | 0.65 | 46.0 | 4.57e-01 | 74.3% | 96.5% |
| 4015391 | 101.1.1.116 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Abp2 | 0.65 | 46.0 | 4.56e-01 | 75.2% | 94.1% |
| 4125245 | 101.1.2.813 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF772 | 0.64 | 55.0 | 5.51e-01 | 93.6% | 98.2% |
| 3692702 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.61 | 54.0 | 4.39e-01 | 99.1% | 58.1% |
| 3167899 | 4156.1.1.0 ↗ | alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like | 0.59 | 41.0 | 4.08e-01 | 90.8% | 67.8% |
| 4940719 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 45.0 | 4.09e-01 | 82.6% | 68.0% |
| 5021943 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.51 | 39.0 | 3.15e-01 | 83.5% | 69.2% |
D2
medium
residues 127-237
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01609.28 best | DDE_Tnp_1 | 47.3 | 3.10e-12 | 96.4% | 47.0% |
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7oufB01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.80 | 59.0 | 5.25e-01 | 92.8% | 56.4% |
| 1bcoA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.67 | 63.0 | 4.93e-01 | 100.0% | 52.7% |
| 7zllA01 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.67 | 37.0 | 2.70e-01 | 93.7% | 21.9% |
| 7pikC01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.65 | 56.0 | 4.51e-01 | 91.9% | 54.6% |
| 6d92A01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.64 | 58.0 | 4.47e-01 | 100.0% | 48.4% |
| 3obyA02 | 3.30.420.60 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 | 0.62 | 43.0 | 4.42e-01 | 94.6% | 73.4% |
| 2f9wA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.62 | 42.0 | 4.02e-01 | 94.6% | 59.5% |
| 3dnfA02 | 3.40.50.11270 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.61 | 36.0 | 4.12e-01 | 99.1% | 79.5% |
| 3gocA00 | 3.30.2170.10 | Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily | 0.60 | 52.0 | 4.10e-01 | 98.2% | 45.6% |
| 4ibnA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.59 | 52.0 | 4.35e-01 | 95.5% | 69.1% |
| 3flhB00 | 3.40.250.10 | Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain | 0.57 | 38.0 | 3.71e-01 | 100.0% | 61.2% |
| 3ga2A00 | 3.30.2170.10 | Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily | 0.57 | 49.0 | 3.88e-01 | 97.3% | 44.9% |
| 2w35A00 | 3.30.2170.10 | Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily | 0.56 | 46.0 | 3.73e-01 | 97.3% | 45.7% |
| 4dkwA00 | 3.30.420.280 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.55 | 43.0 | 3.61e-01 | 100.0% | 47.9% |
| 3eulB00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.55 | 38.0 | 3.72e-01 | 100.0% | 64.5% |
| 6oziB00 | 3.30.2170.10 | Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily | 0.54 | 48.0 | 3.75e-01 | 98.2% | 46.1% |
| 3i8bA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.53 | 48.0 | 3.58e-01 | 100.0% | 95.4% |
| 4nspA00 | 3.30.2170.10 | Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily | 0.53 | 46.0 | 3.62e-01 | 97.3% | 45.0% |
| 4kq9A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.52 | 40.0 | 4.23e-01 | 100.0% | 91.8% |
| 2yx6D01 | 3.30.420.130 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Dinitrogenase iron-molybdenum cofactor biosynthesis domain | 0.52 | 38.0 | 3.95e-01 | 93.7% | 82.4% |
| 5fmvA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 33.0 | 3.70e-01 | 87.4% | 83.3% |
| 3w1eA02 | 3.40.50.10610 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ABC-type transport auxiliary lipoprotein component | 0.52 | 37.0 | 3.21e-01 | 74.8% | 61.0% |
| 3ly7A01 | 3.40.50.11830 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 41.0 | 3.63e-01 | 85.6% | 83.2% |
ECOD (68)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4008205 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.97 | 94.0 | 8.98e-01 | 100.0% | 92.0% |
| 3958443 | 2484.1.1.108 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1_assoc | 0.86 | 71.0 | 5.70e-01 | 100.0% | 48.7% |
| 3959174 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.86 | 71.0 | 6.54e-01 | 100.0% | 70.4% |
| 3959120 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.86 | 64.0 | 7.26e-01 | 90.1% | 100.0% |
| 3962549 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.86 | 65.0 | 5.79e-01 | 91.9% | 58.0% |
| 3958652 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.86 | 70.0 | 5.78e-01 | 100.0% | 51.4% |
| 3960071 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.85 | 70.0 | 5.53e-01 | 100.0% | 45.5% |
| 4142588 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.85 | 67.0 | 5.54e-01 | 100.0% | 49.2% |
| None | — | 0.85 | 70.0 | 4.81e-01 | 100.0% | 28.4% | |
| 3958247 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.85 | 70.0 | 5.31e-01 | 100.0% | 40.6% |
| 3961876 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.85 | 70.0 | 4.73e-01 | 100.0% | 27.1% |
| None | — | 0.85 | 70.0 | 5.27e-01 | 100.0% | 40.4% | |
| 3957639 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.85 | 69.0 | 4.96e-01 | 100.0% | 32.8% |
| 4594347 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.83 | 73.0 | 4.81e-01 | 100.0% | 25.0% |
| 4992937 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.82 | 75.0 | 5.10e-01 | 100.0% | 30.7% |
| 4961488 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.82 | 73.0 | 4.88e-01 | 100.0% | 26.6% |
| 3957539 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.82 | 70.0 | 6.66e-01 | 100.0% | 78.4% |
| 4212008 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.82 | 69.0 | 4.82e-01 | 100.0% | 30.0% |
| 5060820 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.81 | 73.0 | 4.70e-01 | 100.0% | 23.3% |
| 4934684 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.80 | 64.0 | 6.21e-01 | 100.0% | 76.7% |
| 5017700 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.80 | 74.0 | 5.16e-01 | 100.0% | 34.3% |
| 4961867 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.80 | 71.0 | 4.75e-01 | 100.0% | 27.4% |
| 5040335 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.80 | 70.0 | 5.53e-01 | 100.0% | 49.3% |
| 4328684 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.80 | 72.0 | 4.73e-01 | 100.0% | 24.5% |
| 4958315 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.80 | 74.0 | 5.26e-01 | 100.0% | 36.3% |
| 4968579 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.80 | 59.0 | 4.35e-01 | 100.0% | 31.5% |
| 4269616 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.80 | 72.0 | 4.66e-01 | 100.0% | 23.5% |
| 3942981 | 2484.1.1.269 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1_4 | 0.79 | 74.0 | 4.99e-01 | 100.0% | 29.7% |
| 5027997 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.79 | 70.0 | 5.14e-01 | 100.0% | 39.8% |
| 3949341 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.77 | 68.0 | 4.93e-01 | 100.0% | 37.1% |
| 215919 | 2484.1.1.19 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1,Tnp_DNA_bind | 0.77 | 72.0 | 4.62e-01 | 100.0% | 26.3% |
| 4451157 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.76 | 70.0 | 5.39e-01 | 100.0% | 47.0% |
| 3960382 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.76 | 71.0 | 4.84e-01 | 100.0% | 31.8% |
| 4977119 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.76 | 71.0 | 5.51e-01 | 100.0% | 51.1% |
| 4958703 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.75 | 68.0 | 4.80e-01 | 100.0% | 33.8% |
| 5005291 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.75 | 69.0 | 5.32e-01 | 100.0% | 48.6% |
| 5078190 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.74 | 68.0 | 5.07e-01 | 100.0% | 41.5% |
| 4958777 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.74 | 67.0 | 4.74e-01 | 100.0% | 33.8% |
| 4010299 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.73 | 66.0 | 4.71e-01 | 100.0% | 34.5% |
| 3283899 | 2484.1.1.148 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_5 | 0.73 | 68.0 | 4.66e-01 | 100.0% | 37.4% |
| 5040708 | 2484.1.1.107 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_IS1595 | 0.72 | 56.0 | 4.86e-01 | 94.6% | 55.2% |
| 4961941 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.70 | 63.0 | 4.34e-01 | 100.0% | 29.0% |
| 5005232 | 2484.1.1.332 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF772 | 0.70 | 62.0 | 4.47e-01 | 100.0% | 36.0% |
| 4966168 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.70 | 63.0 | 4.44e-01 | 100.0% | 31.9% |
| 2887749 | 2484.1.1.219 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF29688 | 0.69 | 64.0 | 4.92e-01 | 99.1% | 48.9% |
| 3254993 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.69 | 64.0 | 4.72e-01 | 100.0% | 43.4% |
| 4927589 | 2484.1.1.101 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_IS240 | 0.69 | 64.0 | 5.27e-01 | 100.0% | 59.5% |
| 5002475 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.68 | 62.0 | 4.30e-01 | 100.0% | 32.1% |
| 3523358 | 2484.1.1.104 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_1 | 0.67 | 61.0 | 4.68e-01 | 98.2% | 56.2% |
| 3590896 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.67 | 59.0 | 4.11e-01 | 95.5% | 41.7% |
| 3957251 | 4325.1.1.0 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like | 0.67 | 57.0 | 5.69e-01 | 93.7% | 91.3% |
| 3563471 | 2484.1.1.104 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_1 | 0.67 | 60.0 | 4.59e-01 | 98.2% | 60.4% |
| 3932544 | 2484.1.1.66 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_3 | 0.66 | 61.0 | 4.77e-01 | 99.1% | 52.4% |
| 3933068 | 2484.1.1.17 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Transposase_1 | 0.66 | 61.0 | 4.69e-01 | 98.2% | 54.1% |
| 3203226 | 2484.1.1.66 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_3 | 0.66 | 60.0 | 4.76e-01 | 99.1% | 56.3% |
| 5008723 | 2484.1.1.66 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_3 | 0.64 | 59.0 | 4.95e-01 | 97.3% | 61.7% |
| 3753120 | 2484.1.1.104 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_1 | 0.64 | 58.0 | 4.50e-01 | 98.2% | 57.4% |
| 4315536 | 2484.1.1.37 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pan_kinase | 0.63 | 44.0 | 4.30e-01 | 100.0% | 66.7% |
| 3934870 | 2484.1.1.66 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_3 | 0.61 | 49.0 | 4.73e-01 | 84.7% | 80.8% |
| 3593432 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.61 | 51.0 | 4.14e-01 | 89.2% | 56.0% |
| 3589909 | 2484.1.1.144 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DEDD_Tnp_IS110 | 0.60 | 40.0 | 3.98e-01 | 99.1% | 64.2% |
| 3710327 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.57 | 44.0 | 4.43e-01 | 91.0% | 80.0% |
| 3518065 | 220.1.1.2 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › WH1 | 0.56 | 37.0 | 3.52e-01 | 80.2% | 56.3% |
| 4346434 | 2484.1.1.40 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvX | 0.54 | 41.0 | 3.88e-01 | 98.2% | 65.2% |
| 3600816 | 2484.3.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Creatinase/prolidase N-terminal domain › Creatinase/prolidase N-terminal domain | 0.54 | 47.0 | 4.04e-01 | 97.3% | 61.7% |
| 3517035 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.53 | 38.0 | 4.04e-01 | 93.7% | 87.4% |
| 4634997 | 5.1.4.17 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CPSF_A,MMS1_N | 0.51 | 42.0 | 2.49e-01 | 89.2% | 24.7% |
| 4011813 | 5.1.4.16 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CPSF_A | 0.50 | 42.0 | 2.84e-01 | 90.1% | 54.6% |
D3
medium
residues 238-322
Domain cluster:
representative
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ff2A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.65 | 44.0 | 3.99e-01 | 70.6% | 91.5% |
| 3jtzA00 | 3.30.160.390 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Integrase, DNA-binding domain | 0.64 | 43.0 | 4.52e-01 | 78.8% | 76.6% |
| 3ijlA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.63 | 44.0 | 4.10e-01 | 72.9% | 91.7% |
| 2yh6D00 | 3.30.530.50 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › | 0.63 | 44.0 | 4.09e-01 | 72.9% | 68.2% |
| 2kr7A02 | 2.40.10.330 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.63 | 35.0 | 4.12e-01 | 71.8% | 80.7% |
| 3zpeA00 | 2.60.90.50 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › | 0.61 | 37.0 | 3.15e-01 | 71.8% | 37.7% |
| 3mwcA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.61 | 43.0 | 3.71e-01 | 72.9% | 77.0% |
| 3sc7X01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.59 | 41.0 | 2.76e-01 | 71.8% | 21.4% |
| 1oygA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.59 | 47.0 | 3.05e-01 | 89.4% | 79.7% |
| 1ul7A00 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.57 | 40.0 | 3.81e-01 | 72.9% | 71.6% |
| 5hesA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.57 | 41.0 | 4.22e-01 | 75.3% | 97.5% |
| 1zxfA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.57 | 39.0 | 3.29e-01 | 72.9% | 71.0% |
| 4d10F01 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.57 | 39.0 | 3.15e-01 | 72.9% | 88.8% |
| 1x53A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.57 | 39.0 | 3.42e-01 | 71.8% | 72.5% |
| 1cukA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 32.0 | 3.54e-01 | 91.8% | 72.7% |
| 4oxwA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.55 | 41.0 | 3.82e-01 | 78.8% | 92.5% |
| 2ldkA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.55 | 38.0 | 3.05e-01 | 71.8% | 65.7% |
| 7bwcA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.54 | 40.0 | 2.76e-01 | 81.2% | 37.2% |
| 3cm1A00 | 2.30.31.20 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Sporulation-specific cell division protein SsgB | 0.54 | 32.0 | 2.75e-01 | 70.6% | 36.0% |
| 2psoB02 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.53 | 45.0 | 3.55e-01 | 92.9% | 65.2% |
| 2dmyA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.53 | 35.0 | 3.35e-01 | 80.0% | 58.8% |
| 4ywzB00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.53 | 37.0 | 3.09e-01 | 74.1% | 56.8% |
| 3qz4A00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.52 | 40.0 | 2.77e-01 | 82.4% | 51.3% |
| 2k4vA00 | 3.30.160.370 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Domain of unknown function DUF5064 | 0.52 | 36.0 | 3.25e-01 | 74.1% | 59.2% |
| 2xzlA02 | 2.40.30.230 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.52 | 30.0 | 3.13e-01 | 72.9% | 59.5% |
| 6v04A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.51 | 35.0 | 3.13e-01 | 71.8% | 74.8% |
| 4p6zM01 | 3.30.450.60 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.50 | 44.0 | 3.93e-01 | 97.6% | 87.6% |
ECOD (33)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3704832 | 5.1.3.28 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_3 | 0.63 | 47.0 | 3.00e-01 | 80.0% | 50.1% |
| 3651019 | 5.1.4.101 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DUF1618 | 0.62 | 45.0 | 3.19e-01 | 77.6% | 44.4% |
| 4965259 | 218.1.1.5 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MenC_N | 0.61 | 43.0 | 4.13e-01 | 74.1% | 98.0% |
| 3984933 | 252.2.1.5 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › Arm-DNA-bind_3 | 0.61 | 49.0 | 4.87e-01 | 91.8% | 83.3% |
| 3358389 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.61 | 37.0 | 3.38e-01 | 71.8% | 45.6% |
| 3675589 | 5.1.4.6 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,ANAPC4_WD40 | 0.61 | 48.0 | 3.15e-01 | 87.1% | 24.4% |
| 3588583 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.60 | 42.0 | 3.52e-01 | 71.8% | 55.9% |
| 3391610 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.60 | 50.0 | 4.21e-01 | 94.1% | 78.7% |
| 3668385 | 243.1.1.89 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF7074 | 0.60 | 41.0 | 4.11e-01 | 71.8% | 86.7% |
| 3942150 | 252.2.1.5 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › Arm-DNA-bind_3 | 0.60 | 46.0 | 4.57e-01 | 85.9% | 78.9% |
| 5049880 | 331.3.1.9 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 | 0.59 | 41.0 | 3.43e-01 | 72.9% | 73.4% |
| 4029439 | 252.2.1.0 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like | 0.59 | 38.0 | 4.20e-01 | 75.3% | 81.2% |
| 3887495 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.59 | 41.0 | 3.74e-01 | 72.9% | 59.1% |
| 3461242 | 331.4.1.1 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › KA1 | 0.58 | 41.0 | 3.75e-01 | 72.9% | 78.2% |
| 4927397 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.58 | 46.0 | 3.63e-01 | 83.5% | 68.5% |
| 4546371 | 220.1.1.219 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › CheF-arch | 0.56 | 44.0 | 3.88e-01 | 82.4% | 90.8% |
| 3240661 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.56 | 42.0 | 3.22e-01 | 83.5% | 84.1% |
| 3509038 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.55 | 39.0 | 3.70e-01 | 72.9% | 67.0% |
| 3663455 | 5.1.3.68 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF1618 | 0.55 | 41.0 | 2.91e-01 | 81.2% | 35.5% |
| 3789520 | 223.2.1.32 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_2 | 0.55 | 47.0 | 4.01e-01 | 94.1% | 76.3% |
| 4929189 | 5084.1.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like | 0.54 | 39.0 | 3.21e-01 | 75.3% | 93.5% |
| 5000386 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.53 | 42.0 | 3.59e-01 | 88.2% | 59.3% |
| 4973804 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.53 | 34.0 | 3.62e-01 | 83.5% | 74.7% |
| 4933284 | 3692.1.1.1 ↗ | a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › OCD_Mu_crystall | 0.53 | 45.0 | 3.86e-01 | 97.6% | 92.4% |
| 4023778 | 206.1.1.10 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Choline_kinase | 0.53 | 39.0 | 2.63e-01 | 81.2% | 61.9% |
| 4996269 | 844.1.1.0 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain | 0.52 | 38.0 | 2.90e-01 | 78.8% | 82.7% |
| 142888 | 5.1.2.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_43 | 0.52 | 40.0 | 2.77e-01 | 82.4% | 51.3% |
| 5009761 | 331.3.1.7 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › COXG | 0.52 | 44.0 | 3.69e-01 | 92.9% | 77.9% |
| 3414704 | 5.1.13.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › Propeller domain of DCAF15 › DCAF15_WD40 | 0.52 | 42.0 | 2.96e-01 | 91.8% | 41.4% |
| 3913066 | 223.2.1.36 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Intu_longin_3 | 0.51 | 44.0 | 3.53e-01 | 98.8% | 73.8% |
| 3263272 | 2484.1.1.66 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_3 | 0.51 | 36.0 | 3.10e-01 | 74.1% | 55.0% |
| 3590351 | 814.1.1.3 ↗ | a+b two layers › Chorismate lyase › Chorismate lyase › Chorismate lyase › UTRA | 0.51 | 38.0 | 3.22e-01 | 78.8% | 52.4% |
| 3960415 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.51 | 36.0 | 3.20e-01 | 72.9% | 77.5% |
D4
medium
residues 323-415
Domain cluster:
representative
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4g6dB02 | 6.10.140.1800 | Special › Helix non-globular › Helix Hairpins › | 0.60 | 38.0 | 4.08e-01 | 71.0% | 74.1% |
| 7dl9B02 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.59 | 47.0 | 3.68e-01 | 86.0% | 89.7% |
| 1f45B00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.59 | 41.0 | 3.65e-01 | 72.0% | 87.2% |
| 7kfuC02 | 1.20.120.920 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain | 0.58 | 51.0 | 3.85e-01 | 98.9% | 67.8% |
| 8a1gC01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.58 | 40.0 | 3.17e-01 | 71.0% | 89.0% |
| 5c4yA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.57 | 42.0 | 3.77e-01 | 82.8% | 54.4% |
| 3fbzA01 | 1.20.58.800 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.57 | 42.0 | 4.12e-01 | 78.5% | 90.2% |
| 4nb5B02 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.56 | 32.0 | 3.81e-01 | 93.5% | 82.8% |
| 3n98A01 | 3.20.110.10 | Alpha Beta › Alpha-Beta Barrel › 7-stranded beta/alpha barrel › Glycoside hydrolase 38, N terminal domain | 0.56 | 47.0 | 3.09e-01 | 93.5% | 89.9% |
| 1f16A00 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.54 | 41.0 | 3.27e-01 | 80.6% | 65.1% |
| 4dxwA02 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.54 | 41.0 | 3.85e-01 | 79.6% | 70.5% |
| 1rtwB00 | 1.20.910.10 | Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like | 0.54 | 46.0 | 3.57e-01 | 94.6% | 77.4% |
| 3cxbA03 | 1.10.1740.30 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › Secreted effector protein SifA helical domain | 0.53 | 40.0 | 4.26e-01 | 79.6% | 95.1% |
| 6z3yB01 | 1.20.1530.20 | Mainly Alpha › Up-down Bundle › Na+/H+ antiporter like fold › | 0.52 | 43.0 | 2.90e-01 | 91.4% | 40.5% |
| 3ckdA02 | 1.20.58.360 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Shigella T3SS effector IpaH defines | 0.52 | 42.0 | 3.87e-01 | 91.4% | 66.1% |
| 4hteA01 | 1.20.58.1730 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.52 | 45.0 | 3.91e-01 | 94.6% | 64.3% |
| 7dswA01 | 1.20.1530.20 | Mainly Alpha › Up-down Bundle › Na+/H+ antiporter like fold › | 0.52 | 43.0 | 2.86e-01 | 91.4% | 39.3% |
| 4yosA02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.52 | 39.0 | 3.38e-01 | 97.8% | 48.1% |
| 6ldkA01 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.52 | 39.0 | 3.27e-01 | 82.8% | 69.2% |
| 2bnlC00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.51 | 38.0 | 3.40e-01 | 79.6% | 89.6% |
| 3lssA01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.51 | 35.0 | 3.28e-01 | 95.7% | 58.0% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3982540 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 1.00 | 97.0 | 6.86e-01 | 100.0% | 39.6% |
| 3661336 | 143.1.1.3 ↗ | alpha arrays › PABP domain-like › PABC(PABP) domain › PABC(PABP) domain › MLLE_2 | 0.69 | 39.0 | 4.24e-01 | 95.7% | 65.8% |
| 5082960 | 159.1.2.35 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › HAAS | 0.69 | 46.0 | 5.03e-01 | 72.0% | 84.0% |
| 4413687 | 195.1.1.1 ↗ | alpha complex topology › NusB-like › NusB-like › NusB-like › NusB | 0.68 | 38.0 | 3.20e-01 | 94.6% | 33.3% |
| 3171096 | 5054.1.1.12 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › NCA2 | 0.65 | 43.0 | 3.47e-01 | 77.4% | 36.5% |
| 4965791 | 5069.1.1.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes | 0.63 | 43.0 | 3.22e-01 | 71.0% | 56.5% |
| 3720763 | 5086.1.1.169 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › NCA2 | 0.62 | 43.0 | 3.54e-01 | 72.0% | 44.7% |
| 5047712 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.59 | 37.0 | 4.12e-01 | 73.1% | 78.7% |
| 3740226 | 5051.1.1.7 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Nramp | 0.58 | 45.0 | 2.95e-01 | 84.9% | 64.3% |
| 3411996 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.57 | 41.0 | 3.53e-01 | 78.5% | 48.3% |
| 4519879 | 101.1.10.13 ↗ | alpha arrays › HTH › HTH › Cyclin-like › DUF3452 | 0.57 | 49.0 | 3.85e-01 | 94.6% | 54.9% |
| 3278820 | 191.1.1.48 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_46 | 0.55 | 43.0 | 4.00e-01 | 83.9% | 72.5% |
| 3430243 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.55 | 38.0 | 4.13e-01 | 72.0% | 91.3% |
| 3789508 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.55 | 33.0 | 3.76e-01 | 74.2% | 80.0% |
| 3950613 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.54 | 44.0 | 3.79e-01 | 86.0% | 69.9% |
| 3949864 | 632.1.1.37 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain › DUF6474 | 0.53 | 36.0 | 3.66e-01 | 73.1% | 71.1% |
| 3928689 | 109.4.1.257 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PDS5 | 0.52 | 37.0 | 2.51e-01 | 92.5% | 20.0% |
| 5070523 | 4044.1.1.0 ↗ | alpha bundles › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins | 0.52 | 39.0 | 3.96e-01 | 100.0% | 78.9% |
| 4275352 | 166.1.1.1 ↗ | alpha superhelices › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › DXPR_C | 0.51 | 40.0 | 4.06e-01 | 100.0% | 85.3% |
| 5061725 | 632.23.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Helical linker domain in nicking endonuclease N.BspD6I › Helical linker domain in nicking endonuclease N.BspD6I | 0.51 | 38.0 | 4.12e-01 | 77.4% | 92.5% |
| 4427284 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.51 | 46.0 | 3.74e-01 | 100.0% | 72.6% |
| 3931427 | 3236.1.1.1 ↗ | alpha complex topology › Cation-proton antiporter › Cation-proton antiporter (CPA) › Cation-proton antiporter (CPA) › Na_H_Exchanger | 0.51 | 44.0 | 2.91e-01 | 100.0% | 74.7% |
| 3917235 | 101.1.10.7 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C | 0.51 | 43.0 | 3.76e-01 | 94.6% | 78.6% |
| 3684818 | 4952.1.1.1 ↗ | alpha arrays › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › Lyase_1 | 0.51 | 34.0 | 3.18e-01 | 75.3% | 55.7% |
| 3695576 | 3236.1.1.1 ↗ | alpha complex topology › Cation-proton antiporter › Cation-proton antiporter (CPA) › Cation-proton antiporter (CPA) › Na_H_Exchanger | 0.50 | 45.0 | 2.88e-01 | 97.8% | 24.0% |