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LR596902.1__VUE37371.1__X__00035

Bact-Vir

LR596902.1__VUE37371.1__X__00035

Identity

Accession:
LR596902 ↗
Kingdom:
phage

Quality

91.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Roseburia_phage_Jekyll

TaxID: 2570912

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 6-39
PDB
Domain cluster: representative
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2qtqB00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.82 68.0 4.24e-01 100.0% 17.3%
3n2oA04 1.10.287.3440 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.77 62.0 5.58e-01 100.0% 65.4%
1lrzA03 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.72 62.0 5.13e-01 100.0% 91.9%
1kmiZ02 1.10.287.500 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.71 57.0 3.92e-01 100.0% 56.7%
7ymiD01 1.20.85.10 Mainly Alpha › Up-down Bundle › Photosynthetic Reaction Center, subunit M; domain 1 › Photosystem II protein D1-like 0.67 55.0 3.55e-01 100.0% 45.0%
1go3F02 6.10.140.10 Special › Helix non-globular › Helix Hairpins › 0.63 50.0 4.56e-01 88.2% 61.7%
3dmyA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.62 51.0 3.39e-01 94.1% 35.0%
2rp4A00 6.10.280.60 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Transcription factor p53, C-terminal domain 0.61 49.0 4.05e-01 100.0% 47.9%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2476070 616.1.1.3 ↗ alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › Flu_NS1 0.67 53.0 5.21e-01 91.2% 86.8%
D2 medium residues 46-78
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5gizA01 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.60 49.0 3.40e-01 100.0% 85.3%
1e52A00 4.10.860.10 Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › UVR domain 0.52 39.0 3.58e-01 97.0% 60.7%