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LR596902.1__VUE37411.1__X__00055
Bact-VirLR596902.1__VUE37411.1__X__00055
Identity
- Accession:
- LR596902 ↗
- Kingdom:
- phage
Quality
94.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 3-72
Domain cluster:
representative
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1zs8A01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.65 | 55.0 | 4.22e-01 | 98.6% | 49.1% |
| 3c6kA01 | 3.30.160.110 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Sirohaem synthase, central domain | 0.60 | 43.0 | 3.96e-01 | 75.7% | 56.4% |
| 3jtzA00 | 3.30.160.390 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Integrase, DNA-binding domain | 0.60 | 32.0 | 3.10e-01 | 71.4% | 45.5% |
| 2iiiA00 | 3.60.90.10 | Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase | 0.60 | 44.0 | 3.77e-01 | 80.0% | 47.5% |
| 3m2oA01 | 3.30.720.120 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.58 | 33.0 | 3.71e-01 | 70.0% | 73.6% |
| 1ylxA00 | 3.30.70.1480 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GK1464-like | 0.58 | 44.0 | 4.05e-01 | 87.1% | 76.8% |
| 1uyjA01 | 3.30.360.60 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › | 0.56 | 40.0 | 3.87e-01 | 77.1% | 73.2% |
| 3b7fA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.56 | 47.0 | 3.07e-01 | 100.0% | 67.4% |
| 2k3dA00 | 3.10.450.130 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › folded 79 residue fragment of lin0334 like domains | 0.56 | 42.0 | 3.95e-01 | 82.9% | 73.6% |
| 3rd6A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.55 | 40.0 | 3.23e-01 | 77.1% | 44.4% |
| 1zhxA03 | 2.40.160.120 | Mainly Beta › Beta Barrel › Porin › | 0.55 | 46.0 | 3.50e-01 | 98.6% | 57.6% |
| 3r90A00 | 3.10.400.20 | Alpha Beta › Roll › Sulfate adenylyltransferase › | 0.55 | 39.0 | 2.92e-01 | 75.7% | 36.2% |
| 3pqhA01 | 2.20.220.20 | Mainly Beta › Single Sheet › Glycosyl hydrolase fold › | 0.54 | 35.0 | 3.80e-01 | 90.0% | 78.3% |
| 3dueA00 | 3.40.1420.30 | Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › | 0.53 | 45.0 | 3.79e-01 | 100.0% | 93.7% |
| 4rmmA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.52 | 39.0 | 3.27e-01 | 82.9% | 93.3% |
| 3hlzB01 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.52 | 36.0 | 2.93e-01 | 72.9% | 80.0% |
| 3ffhA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.52 | 42.0 | 3.48e-01 | 95.7% | 47.7% |
| 3gqsB00 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.52 | 36.0 | 3.29e-01 | 74.3% | 72.3% |
| 4gs5A01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.52 | 41.0 | 2.97e-01 | 94.3% | 88.5% |
| 3hdoA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.51 | 39.0 | 3.26e-01 | 90.0% | 45.4% |
| 4r7rA00 | 3.30.1490.410 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Uncharacterised protein PF16224, DUF4883 | 0.51 | 36.0 | 3.08e-01 | 75.7% | 59.0% |
| 3r7wC02 | 3.30.450.190 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.51 | 35.0 | 3.08e-01 | 72.9% | 96.3% |
| 3d79A01 | 3.10.450.120 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Pre-PUA domain; domain 1 | 0.50 | 36.0 | 3.59e-01 | 75.7% | 87.8% |
| 4hs5A00 | 3.30.920.10 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY | 0.50 | 40.0 | 3.57e-01 | 91.4% | 91.4% |
ECOD (42)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3924724 | 331.23.1.0 ↗ | a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain | 0.65 | 45.0 | 4.32e-01 | 75.7% | 63.7% |
| 3991902 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.63 | 44.0 | 3.82e-01 | 72.9% | 65.5% |
| 3709607 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.59 | 41.0 | 3.11e-01 | 74.3% | 43.4% |
| 3238753 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.59 | 41.0 | 3.09e-01 | 72.9% | 65.7% |
| 3174248 | 4099.1.1.1 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › MAD | 0.59 | 47.0 | 4.05e-01 | 98.6% | 53.2% |
| 3906179 | 4099.1.1.9 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Med27 | 0.58 | 43.0 | 3.39e-01 | 81.4% | 36.1% |
| 3551905 | 5086.1.1.143 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › Med27 | 0.58 | 42.0 | 3.35e-01 | 81.4% | 36.1% |
| 3253856 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.57 | 44.0 | 3.72e-01 | 91.4% | 48.0% |
| 3719388 | 243.4.1.0 ↗ | a+b two layers › Cystatin-like › DsbC/DsbG N-terminal domain-like › DsbC/DsbG N-terminal domain-like | 0.57 | 45.0 | 3.22e-01 | 90.0% | 44.6% |
| 3262209 | 243.6.1.4 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › Pre-PUA | 0.56 | 40.0 | 3.72e-01 | 75.7% | 75.6% |
| 4943586 | 243.6.1.12 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › PUA | 0.56 | 37.0 | 3.64e-01 | 70.0% | 83.7% |
| 4029228 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.56 | 39.0 | 2.92e-01 | 74.3% | 41.1% |
| 5040136 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.55 | 46.0 | 2.94e-01 | 100.0% | 41.4% |
| 3603899 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.55 | 37.0 | 3.06e-01 | 70.0% | 53.3% |
| 3592067 | 243.4.1.0 ↗ | a+b two layers › Cystatin-like › DsbC/DsbG N-terminal domain-like › DsbC/DsbG N-terminal domain-like | 0.55 | 43.0 | 3.31e-01 | 90.0% | 50.0% |
| 4936526 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.55 | 38.0 | 3.11e-01 | 72.9% | 53.6% |
| 3275983 | 206.1.2.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › SAICAR synthase › SAICAR_synt | 0.54 | 46.0 | 3.10e-01 | 97.1% | 43.4% |
| 3383213 | 5.1.3.67 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 | 0.54 | 46.0 | 3.12e-01 | 100.0% | 60.0% |
| 3832491 | 5.1.3.67 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 | 0.54 | 42.0 | 2.77e-01 | 85.7% | 25.0% |
| 4979007 | 324.1.1.1 ↗ | a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC | 0.54 | 40.0 | 3.28e-01 | 80.0% | 55.7% |
| 3699984 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.54 | 41.0 | 2.76e-01 | 87.1% | 57.6% |
| 3202709 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.54 | 38.0 | 3.03e-01 | 75.7% | 55.0% |
| 3963153 | 324.1.1.1 ↗ | a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC | 0.54 | 40.0 | 3.18e-01 | 82.9% | 49.7% |
| 3460209 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.53 | 46.0 | 3.03e-01 | 100.0% | 34.2% |
| 4479376 | 241.2.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay | 0.53 | 45.0 | 3.96e-01 | 100.0% | 90.4% |
| 4927832 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.53 | 38.0 | 3.35e-01 | 77.1% | 86.4% |
| 68497 | 809.2.1.1 ↗ | a+b two layers › BLIP-like › BT0923-like › BT0923-like › PepSY_like | 0.53 | 37.0 | 3.98e-01 | 82.9% | 92.9% |
| 4019353 | 243.6.1.4 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › Pre-PUA | 0.52 | 37.0 | 3.46e-01 | 75.7% | 75.6% |
| 4948218 | 243.6.1.12 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › PUA | 0.52 | 36.0 | 3.48e-01 | 74.3% | 82.4% |
| 5040413 | 241.1.1.5 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › DUF2299 | 0.52 | 43.0 | 3.49e-01 | 98.6% | 92.3% |
| 5021016 | 243.6.1.0 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain | 0.52 | 36.0 | 3.36e-01 | 74.3% | 68.4% |
| 5083058 | 243.6.1.0 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain | 0.52 | 36.0 | 3.50e-01 | 74.3% | 88.7% |
| 3602725 | 243.6.1.0 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain | 0.51 | 35.0 | 3.54e-01 | 71.4% | 85.7% |
| 5022814 | 243.6.1.0 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain | 0.51 | 35.0 | 3.48e-01 | 72.9% | 84.0% |
| 5644 | 809.2.1.1 ↗ | a+b two layers › BLIP-like › BT0923-like › BT0923-like › PepSY_like | 0.51 | 36.0 | 3.91e-01 | 82.9% | 94.6% |
| 3278906 | 324.1.1.1 ↗ | a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC | 0.51 | 41.0 | 3.24e-01 | 92.9% | 64.4% |
| 4958423 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.51 | 39.0 | 2.89e-01 | 88.6% | 65.1% |
| 4775272 | 109.21.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain | 0.51 | 26.0 | 3.10e-01 | 87.1% | 73.9% |
| 3700578 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.50 | 35.0 | 3.65e-01 | 82.9% | 85.0% |
| 3102376 | 5.1.4.660 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_IFT122_1st, Beta-prop_WDR5 | 0.50 | 43.0 | 2.86e-01 | 100.0% | 29.3% |
| 3457354 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.50 | 34.0 | 2.78e-01 | 71.4% | 35.9% |
| 3196827 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.50 | 33.0 | 3.32e-01 | 78.6% | 65.3% |