←Back to structures
LR597635.1__VUF53581.1__X__00026
Bact-VirLR597635.1__VUF53581.1__X__00026
Identity
- Accession:
- LR597635 ↗
- Kingdom:
- phage
Quality
80.7
mean pLDDT
Taxonomy
TaxID: 2847061
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-48
Domain cluster:
rep: LN881737.1__CUL03539.1__X__00001__D148-210
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF21446.4 best | Gp34_trimer | 49.0 | 1.10e-12 | 80.8% | 32.2% |
CATH (54)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ke6B01 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.68 | 57.0 | 3.78e-01 | 100.0% | 43.0% |
| 2w7qB00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.67 | 51.0 | 3.46e-01 | 100.0% | 22.2% |
| 3zt9A00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.67 | 56.0 | 3.81e-01 | 100.0% | 46.4% |
| 2it9A00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.64 | 48.0 | 3.66e-01 | 95.7% | 33.3% |
| 2qv8A00 | 3.55.40.10 | Alpha Beta › 3-Layer(bab) Sandwich › minor pseudopilin epsh fold › minor pseudopilin epsh domain | 0.63 | 52.0 | 3.84e-01 | 100.0% | 70.1% |
| 2bklA02 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.63 | 53.0 | 3.24e-01 | 100.0% | 24.6% |
| 2nlvA00 | 3.30.310.110 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like | 0.63 | 53.0 | 4.12e-01 | 100.0% | 45.5% |
| 2gx9A00 | 3.30.420.330 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Influenza virus non-structural protein, effector domain | 0.63 | 52.0 | 3.87e-01 | 95.7% | 61.1% |
| 3r8eA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.62 | 42.0 | 3.14e-01 | 87.2% | 25.0% |
| 1t9hA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.60 | 42.0 | 3.68e-01 | 74.5% | 64.4% |
| 1iv0A00 | 3.30.420.140 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › YqgF/RNase H-like domain | 0.60 | 41.0 | 3.35e-01 | 85.1% | 34.7% |
| 3fewX02 | 3.30.1310.40 | Alpha Beta › 2-Layer Sandwich › Ybab; Chain: A; › | 0.60 | 49.0 | 4.00e-01 | 95.7% | 61.1% |
| 2nwvA00 | 3.30.310.110 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like | 0.60 | 50.0 | 3.91e-01 | 100.0% | 49.1% |
| 5z1gB01 | 3.40.50.10480 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Brix domain | 0.59 | 48.0 | 3.28e-01 | 100.0% | 65.7% |
| 4h0oA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.58 | 41.0 | 2.87e-01 | 93.6% | 20.2% |
| 1h54A03 | 2.60.420.10 | Mainly Beta › Sandwich › Maltose phosphorylase, domain 3 › Maltose phosphorylase, domain 3 | 0.58 | 49.0 | 4.28e-01 | 97.9% | 97.3% |
| 3o4hA01 | 2.130.10.150 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Peptidase/esterase 'gauge' domain | 0.58 | 51.0 | 3.11e-01 | 100.0% | 22.7% |
| 1pbyB00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.57 | 50.0 | 3.02e-01 | 100.0% | 22.8% |
| 3bxoA02 | 2.20.130.10 | Mainly Beta › Single Sheet › S-adenosyl-L-methionine-dependent methyltransferases › CAC2371-like domains | 0.57 | 48.0 | 4.47e-01 | 95.7% | 76.3% |
| 4meaA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.57 | 47.0 | 2.91e-01 | 97.9% | 63.6% |
| 3holA03 | 2.40.128.240 | Mainly Beta › Beta Barrel › Lipocalin › | 0.57 | 44.0 | 3.74e-01 | 100.0% | 48.3% |
| 4v19S00 | 3.30.420.80 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribosomal protein S11/S14 | 0.57 | 48.0 | 3.41e-01 | 95.7% | 53.1% |
| 2vugA03 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.57 | 42.0 | 3.44e-01 | 87.2% | 89.2% |
| 1wznA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.57 | 46.0 | 4.40e-01 | 93.6% | 78.6% |
| 3besR02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 41.0 | 3.21e-01 | 80.9% | 71.2% |
| 1fm2B01 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.56 | 41.0 | 2.68e-01 | 95.7% | 15.3% |
| 2je8A04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 45.0 | 3.61e-01 | 91.5% | 68.6% |
| 7obmA01 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.56 | 48.0 | 2.94e-01 | 100.0% | 20.2% |
| 3a7rA02 | 3.30.390.50 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain | 0.56 | 39.0 | 3.26e-01 | 80.9% | 40.4% |
| 5aj3P00 | 3.30.1320.10 | Alpha Beta › 2-Layer Sandwich › S16 Ribosomal Protein; Chain: A; › Ribosomal protein S16 | 0.55 | 43.0 | 3.46e-01 | 100.0% | 47.0% |
| 1woqA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.55 | 45.0 | 3.50e-01 | 95.7% | 48.2% |
| 6nvyB01 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.55 | 44.0 | 2.80e-01 | 97.9% | 77.6% |
| 5mmjp00 | 3.30.1320.10 | Alpha Beta › 2-Layer Sandwich › S16 Ribosomal Protein; Chain: A; › Ribosomal protein S16 | 0.54 | 42.0 | 3.76e-01 | 97.9% | 60.0% |
| 1wlgA02 | 2.60.98.20 | Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Flagellar hook protein FlgE | 0.54 | 43.0 | 3.29e-01 | 100.0% | 42.9% |
| 2xzmI00 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.54 | 40.0 | 2.91e-01 | 83.0% | 49.7% |
| 3b5hA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 43.0 | 3.73e-01 | 95.7% | 75.6% |
| 1wchA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.53 | 43.0 | 2.65e-01 | 91.5% | 14.0% |
| 6nqbP00 | 3.30.1320.10 | Alpha Beta › 2-Layer Sandwich › S16 Ribosomal Protein; Chain: A; › Ribosomal protein S16 | 0.53 | 41.0 | 3.67e-01 | 97.9% | 65.8% |
| 3vglA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.53 | 41.0 | 3.09e-01 | 93.6% | 35.3% |
| 1z05A02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.53 | 41.0 | 3.02e-01 | 95.7% | 35.7% |
| 3wirA03 | 2.60.420.10 | Mainly Beta › Sandwich › Maltose phosphorylase, domain 3 › Maltose phosphorylase, domain 3 | 0.52 | 44.0 | 3.92e-01 | 95.7% | 66.7% |
| 1kcgC00 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.52 | 42.0 | 2.97e-01 | 97.9% | 26.5% |
| 4dohB02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 39.0 | 3.32e-01 | 87.2% | 65.9% |
| 5tjjB02 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.52 | 41.0 | 2.96e-01 | 100.0% | 26.4% |
| 7nn3B01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 41.0 | 2.56e-01 | 97.9% | 25.0% |
| 2qm4A01 | 2.170.210.10 | Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › DNA double-strand break repair and VJ recombination XRCC4, N-terminal | 0.51 | 40.0 | 3.04e-01 | 97.9% | 70.6% |
| 3mcpA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.51 | 39.0 | 3.25e-01 | 100.0% | 42.9% |
| 2n3gA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.51 | 34.0 | 3.10e-01 | 72.3% | 55.6% |
| 2mqdA00 | 3.30.1460.60 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.51 | 39.0 | 3.09e-01 | 100.0% | 37.8% |
| 1okjB01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.51 | 38.0 | 2.98e-01 | 95.7% | 33.1% |
| 2nvmA00 | 3.30.310.110 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like | 0.51 | 39.0 | 3.29e-01 | 100.0% | 51.0% |
| 2ap1A01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.51 | 39.0 | 2.99e-01 | 95.7% | 34.5% |
| 4efjA01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.50 | 40.0 | 3.04e-01 | 95.7% | 75.7% |
| 1fyhB02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 38.0 | 3.10e-01 | 89.4% | 68.0% |
ECOD (63)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2559738 | 79.1.1.9 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Gp34_trimer | 0.94 | 86.0 | 4.97e-01 | 100.0% | 13.1% |
| 2417913 | 243.19.1.0 ↗ | a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains | 0.93 | 85.0 | 4.84e-01 | 100.0% | 11.9% |
| 1841016 | 79.1.1.9 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Gp34_trimer | 0.92 | 84.0 | 5.21e-01 | 100.0% | 20.0% |
| 3597350 | 73.1.1.0 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain | 0.68 | 52.0 | 4.50e-01 | 100.0% | 51.8% |
| 3281300 | 4.1.1.426 ↗ | beta barrels › SH3 › SH3 › SH3 › PF31188 | 0.66 | 48.0 | 4.45e-01 | 91.5% | 60.0% |
| 3309425 | 844.1.1.1 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Tub | 0.65 | 54.0 | 3.38e-01 | 100.0% | 21.9% |
| 3291828 | 5.1.4.14 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Peptidase_S9_N | 0.63 | 54.0 | 3.25e-01 | 100.0% | 26.2% |
| 4001680 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 43.0 | 3.67e-01 | 95.7% | 40.9% |
| 5043415 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.62 | 51.0 | 3.90e-01 | 97.9% | 38.3% |
| 3712697 | 4252.1.1.0 ↗ | beta barrels › AttH-like › AttH-like › AttH-like | 0.61 | 50.0 | 3.69e-01 | 100.0% | 47.3% |
| 4998404 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.61 | 43.0 | 4.06e-01 | 91.5% | 60.0% |
| 3215391 | 304.9.1.25 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_7 | 0.60 | 43.0 | 3.00e-01 | 93.6% | 21.8% |
| 3659799 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.60 | 50.0 | 2.79e-01 | 100.0% | 16.4% |
| 4029963 | 375.1.1.26 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 | 0.60 | 42.0 | 3.32e-01 | 93.6% | 32.2% |
| 3712993 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.60 | 46.0 | 4.08e-01 | 89.4% | 66.7% |
| 4336488 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.59 | 40.0 | 3.58e-01 | 70.2% | 61.4% |
| 4998507 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.59 | 43.0 | 4.18e-01 | 95.7% | 72.2% |
| 4591248 | 837.1.1.1 ↗ | a+b two layers › Ribosomal protein S16 › Ribosomal protein S16 › Ribosomal protein S16 › Ribosomal_S16 | 0.59 | 45.0 | 3.61e-01 | 95.7% | 42.0% |
| 3642926 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.58 | 48.0 | 3.34e-01 | 100.0% | 83.8% |
| 3255028 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.58 | 48.0 | 3.38e-01 | 100.0% | 46.5% |
| 3784839 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.58 | 46.0 | 3.70e-01 | 91.5% | 86.0% |
| 3505097 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.58 | 48.0 | 4.10e-01 | 100.0% | 60.0% |
| 3501432 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.58 | 38.0 | 3.05e-01 | 87.2% | 30.0% |
| 4047807 | 837.1.1.1 ↗ | a+b two layers › Ribosomal protein S16 › Ribosomal protein S16 › Ribosomal protein S16 › Ribosomal_S16 | 0.58 | 47.0 | 4.04e-01 | 100.0% | 57.6% |
| 3969599 | 873.1.1.7 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › Arabinose_bd | 0.57 | 46.0 | 3.07e-01 | 91.5% | 48.5% |
| 4112934 | 837.1.1.1 ↗ | a+b two layers › Ribosomal protein S16 › Ribosomal protein S16 › Ribosomal protein S16 › Ribosomal_S16 | 0.57 | 46.0 | 4.09e-01 | 100.0% | 64.0% |
| 4309256 | 837.1.1.1 ↗ | a+b two layers › Ribosomal protein S16 › Ribosomal protein S16 › Ribosomal protein S16 › Ribosomal_S16 | 0.56 | 45.0 | 3.98e-01 | 100.0% | 60.0% |
| 4295539 | 837.1.1.1 ↗ | a+b two layers › Ribosomal protein S16 › Ribosomal protein S16 › Ribosomal protein S16 › Ribosomal_S16 | 0.56 | 42.0 | 3.54e-01 | 95.7% | 45.7% |
| 3966307 | 837.1.1.0 ↗ | a+b two layers › Ribosomal protein S16 › Ribosomal protein S16 › Ribosomal protein S16 | 0.56 | 45.0 | 3.99e-01 | 100.0% | 65.0% |
| 4464056 | 837.1.1.1 ↗ | a+b two layers › Ribosomal protein S16 › Ribosomal protein S16 › Ribosomal protein S16 › Ribosomal_S16 | 0.56 | 45.0 | 3.70e-01 | 100.0% | 51.5% |
| 3190697 | 2484.1.1.12 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Acetate_kinase | 0.55 | 44.0 | 2.95e-01 | 95.7% | 21.8% |
| 3988064 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.55 | 40.0 | 3.76e-01 | 89.4% | 68.6% |
| 4302789 | 837.1.1.1 ↗ | a+b two layers › Ribosomal protein S16 › Ribosomal protein S16 › Ribosomal protein S16 › Ribosomal_S16 | 0.55 | 44.0 | 3.42e-01 | 100.0% | 42.4% |
| 3579807 | 101.1.2.709 ↗ | alpha arrays › HTH › HTH › winged helix domain › Hexokinase_1 | 0.55 | 41.0 | 3.34e-01 | 87.2% | 40.0% |
| 5062942 | 7089.1.1.0 ↗ | a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD | 0.55 | 40.0 | 3.89e-01 | 97.9% | 70.9% |
| 3806989 | 5.1.5.66 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › FBA_1 | 0.55 | 46.0 | 2.88e-01 | 100.0% | 28.8% |
| 5043397 | 4252.1.1.0 ↗ | beta barrels › AttH-like › AttH-like › AttH-like | 0.54 | 46.0 | 3.39e-01 | 97.9% | 36.4% |
| 4030396 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.54 | 43.0 | 3.31e-01 | 97.9% | 38.5% |
| 4993189 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.54 | 36.0 | 3.51e-01 | 95.7% | 58.3% |
| 4969523 | 7089.1.1.0 ↗ | a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD | 0.54 | 39.0 | 3.85e-01 | 97.9% | 72.2% |
| 4632327 | 2484.1.1.40 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvX | 0.54 | 42.0 | 3.19e-01 | 100.0% | 31.7% |
| 4260807 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.53 | 41.0 | 3.67e-01 | 87.2% | 58.6% |
| 5025460 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.53 | 39.0 | 3.60e-01 | 89.4% | 60.0% |
| 3615406 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.53 | 40.0 | 3.26e-01 | 95.7% | 41.0% |
| 3290097 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.53 | 41.0 | 3.45e-01 | 93.6% | 55.8% |
| 5035305 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.53 | 40.0 | 3.59e-01 | 93.6% | 56.2% |
| 3511375 | 4.1.1.349 ↗ | beta barrels › SH3 › SH3 › SH3 › ROF | 0.53 | 37.0 | 3.07e-01 | 72.3% | 45.9% |
| 3923456 | 2484.1.1.4 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_H | 0.52 | 39.0 | 2.75e-01 | 91.5% | 23.5% |
| 4108976 | 2484.1.1.40 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvX | 0.52 | 41.0 | 3.07e-01 | 100.0% | 31.6% |
| 4193378 | 2484.1.1.5 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Hexokinase_1 | 0.52 | 41.0 | 3.06e-01 | 95.7% | 42.1% |
| 3504736 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.52 | 43.0 | 3.17e-01 | 97.9% | 40.7% |
| 4077485 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.52 | 40.0 | 3.77e-01 | 93.6% | 80.0% |
| 3920550 | 71.1.1.14 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › GPCR_chapero_1 | 0.52 | 44.0 | 2.81e-01 | 100.0% | 87.8% |
| 4400911 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.52 | 36.0 | 3.77e-01 | 89.4% | 87.5% |
| 3202006 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.52 | 41.0 | 2.55e-01 | 100.0% | 18.2% |
| 5010447 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.52 | 40.0 | 2.52e-01 | 91.5% | 20.3% |
| 4573327 | 2484.1.1.40 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvX | 0.51 | 40.0 | 3.00e-01 | 100.0% | 32.1% |
| 5061635 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.51 | 36.0 | 2.12e-01 | 100.0% | 7.0% |
| 1150061 | 2484.1.1.8 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › ROK | 0.51 | 39.0 | 3.10e-01 | 100.0% | 36.4% |
| 4980248 | 7089.1.1.0 ↗ | a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD | 0.51 | 38.0 | 3.63e-01 | 97.9% | 69.0% |
| 3889345 | 10.3.1.1 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF | 0.51 | 35.0 | 2.66e-01 | 78.7% | 77.8% |
| 5013269 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.51 | 43.0 | 3.33e-01 | 100.0% | 95.7% |
| 4617559 | 2007.1.1.10 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › GATase_3 | 0.51 | 35.0 | 2.43e-01 | 78.7% | 32.7% |
D2
medium
residues 91-170
Domain cluster:
rep: JX560968.1__AFU62386.1__X__00055__D471-538
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF12604.15 best | gp37_C | 27.8 | 3.00e-06 | 91.2% | 63.2% |