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LR743529.1__CAA2393652.1__X__00003

Bact-Vir

LR743529.1__CAA2393652.1__X__00003

Identity

Accession:
LR743529 ↗
Kingdom:
phage

Quality

86.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Xanthomonas_phage_Sopo

TaxID: 2674972

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-94
PDB
Domain cluster: representative
CATH (25)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6c6sD02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.78 44.0 5.19e-01 88.5% 81.7%
3pieB05 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.75 46.0 5.33e-01 87.4% 84.4%
2egcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 47.0 5.00e-01 90.8% 80.0%
2heqA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 43.0 5.24e-01 88.5% 100.0%
1vwxM01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.69 40.0 4.12e-01 92.0% 58.8%
5zwzA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 43.0 4.76e-01 87.4% 80.0%
6gbuD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 45.0 5.16e-01 95.4% 96.9%
1tg0A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 45.0 5.02e-01 90.8% 92.4%
6uzjA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 42.0 4.73e-01 89.7% 95.2%
1yn8A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 41.0 4.69e-01 89.7% 100.0%
6az1E03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.60 38.0 4.10e-01 90.8% 76.4%
3j7aF03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.59 38.0 4.11e-01 90.8% 78.9%
1v1cA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 42.0 4.63e-01 92.0% 97.1%
1amiA04 3.20.19.10 Alpha Beta › Alpha-Beta Barrel › Aconitase; domain 4 › Aconitase, domain 4 0.58 41.0 3.10e-01 74.7% 88.2%
1gutA00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.57 34.0 3.79e-01 81.6% 77.6%
1b9mA03 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.56 36.0 3.87e-01 83.9% 78.9%
1t0hA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.54 39.0 3.83e-01 79.3% 69.8%
1eqtA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.54 33.0 3.67e-01 79.3% 79.1%
5yprA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.53 44.0 4.49e-01 95.4% 97.6%
1nr4C00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.52 32.0 3.62e-01 79.3% 81.8%
4hcsA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.52 33.0 3.70e-01 80.5% 83.6%
1ci3M02 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.52 33.0 3.82e-01 79.3% 96.6%
3u12A00 2.30.29.180 Mainly Beta › Roll › PH-domain like › Ubiquitin carboxyl-terminal hydrolase 26/29/37, pleckstrin homology-like domain 0.51 43.0 4.13e-01 96.6% 88.5%
2eyzA03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.51 32.0 3.25e-01 82.8% 61.5%
2hzrA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.50 40.0 3.35e-01 89.7% 65.2%
ECOD (43)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3393297 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.76 43.0 4.49e-01 92.0% 61.3%
5036498 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.74 44.0 4.75e-01 94.3% 69.3%
3899589 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 45.0 5.24e-01 92.0% 100.0%
3907870 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.67 45.0 4.69e-01 94.3% 75.9%
3210707 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.66 44.0 5.15e-01 88.5% 100.0%
3372822 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 45.0 4.80e-01 90.8% 82.7%
157526 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.65 43.0 4.91e-01 92.0% 93.7%
3581631 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.65 45.0 5.00e-01 93.1% 95.4%
3248395 4.1.1.232 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_Tf2-1 0.65 47.0 5.01e-01 90.8% 88.0%
3936225 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 43.0 4.72e-01 92.0% 85.7%
3227565 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.64 41.0 4.78e-01 86.2% 95.0%
3938415 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.64 45.0 5.08e-01 92.0% 98.5%
4218488 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.64 45.0 4.65e-01 95.4% 78.8%
3171604 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.64 48.0 5.08e-01 94.3% 92.0%
3999507 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 44.0 4.85e-01 92.0% 91.4%
3924337 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 42.0 4.77e-01 89.7% 100.0%
3995675 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.62 41.0 4.67e-01 88.5% 100.0%
160765 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.61 44.0 4.70e-01 92.0% 85.7%
3478898 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 41.0 4.58e-01 100.0% 92.3%
3710561 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.61 42.0 4.69e-01 90.8% 95.4%
4610859 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.61 41.0 4.56e-01 94.3% 93.8%
3554994 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.60 43.0 4.34e-01 94.3% 74.2%
3879132 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.60 46.0 4.87e-01 97.7% 94.7%
3589730 4.1.1.252 ↗ beta barrels › SH3 › SH3 › SH3 › MdcG_N 0.60 45.0 4.71e-01 94.3% 90.0%
4134876 4.1.1.334 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1, SH3_2 0.60 43.0 3.57e-01 100.0% 40.6%
3999846 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.60 42.0 4.47e-01 94.3% 86.7%
3585016 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.58 37.0 4.31e-01 85.1% 95.0%
3203654 601.16.1.12 ↗ alpha bundles › Four-helical up-and-down bundle › FAT domain of focal adhesion kinase › FAT domain of focal adhesion kinase › SH3_1 0.58 42.0 3.31e-01 94.3% 34.5%
3991896 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.58 43.0 4.26e-01 97.7% 73.7%
3583296 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.58 42.0 4.55e-01 95.4% 97.1%
3978624 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.57 35.0 3.11e-01 92.0% 40.0%
3480200 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.57 44.0 4.77e-01 92.0% 97.3%
3439990 220.1.1.76 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_2 0.56 41.0 4.09e-01 81.6% 75.6%
4968686 4312.1.1.15 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › DUF4258 0.55 43.0 4.13e-01 83.9% 82.0%
3217589 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.54 38.0 2.41e-01 74.7% 65.5%
3707345 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.53 45.0 4.46e-01 90.8% 94.4%
4623446 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.53 34.0 3.08e-01 85.1% 46.0%
3214006 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.52 43.0 3.83e-01 92.0% 73.8%
515 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.52 43.0 4.25e-01 92.0% 98.9%
3890642 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 42.0 3.58e-01 87.4% 84.3%
3232165 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.52 43.0 4.28e-01 92.0% 98.9%
3549597 4.1.1.77 ↗ beta barrels › SH3 › SH3 › SH3 › VGCC_beta4Aa_N 0.51 43.0 3.78e-01 92.0% 67.7%
3767975 220.1.1.38 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › UCH_N 0.51 44.0 4.15e-01 97.7% 79.1%