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LR794148.1__CAB3635757.1__APCIWABI3293_23__00016
Bact-VirLR794148.1__CAB3635757.1__APCIWABI3293_23__00016
Identity
- Accession:
- LR794148 ↗
- Kingdom:
- phage
Quality
81.2
mean pLDDT
Taxonomy
TaxID: 2717584
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 19-159
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05526.18 best | R_equi_Vir | 34.9 | 2.70e-08 | 97.2% | 78.8% |
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4csbA00 | 2.40.128.480 | Mainly Beta › Beta Barrel › Lipocalin › Rhodococcus equi virulence-associated protein | 0.91 | 69.0 | 7.72e-01 | 77.3% | 100.0% |
| 1jmxA02 | 2.40.128.120 | Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 | 0.69 | 47.0 | 5.30e-01 | 88.7% | 89.9% |
| 3gp6A00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.58 | 49.0 | 4.75e-01 | 88.7% | 83.9% |
| 6lofA00 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.55 | 39.0 | 3.74e-01 | 72.3% | 85.2% |
| 2c4iA01 | 2.40.128.30 | Mainly Beta › Beta Barrel › Lipocalin › Avidin-like | 0.54 | 41.0 | 4.47e-01 | 87.2% | 94.9% |
| 3g7gH00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.54 | 42.0 | 4.12e-01 | 80.9% | 90.8% |
| 2f1vA00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.54 | 45.0 | 4.12e-01 | 89.4% | 95.1% |
| 3dukA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 36.0 | 3.87e-01 | 96.5% | 80.8% |
| 1h91A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.52 | 38.0 | 3.48e-01 | 87.2% | 58.9% |
| 3ecfA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 35.0 | 3.71e-01 | 96.5% | 76.6% |
| 6r3wA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.51 | 42.0 | 4.07e-01 | 88.7% | 90.1% |
| 5evhA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 34.0 | 3.70e-01 | 96.5% | 81.0% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1290562 | 3863.1.1.2 ↗ | beta barrels › Virulence associated protein B (Vapb) › Virulence associated protein B (Vapb) › Virulence associated protein B (Vapb) › R_equi_Vir | 0.91 | 69.0 | 7.72e-01 | 77.3% | 100.0% |
| 4030163 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.67 | 30.0 | 3.41e-01 | 76.6% | 55.2% |
| 3065351 | 9.3.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like | 0.60 | 46.0 | 4.80e-01 | 85.8% | 87.5% |
| 3684939 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.60 | 50.0 | 4.75e-01 | 89.4% | 94.5% |
| 4961667 | 5084.1.1.45 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › PF26421 | 0.59 | 42.0 | 4.58e-01 | 88.7% | 89.6% |
| 4224449 | 5084.1.1.29 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › PF27340 | 0.59 | 50.0 | 4.64e-01 | 90.1% | 90.2% |
| 3838164 | 5084.1.1.15 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP | 0.57 | 47.0 | 4.28e-01 | 87.9% | 93.5% |
| 3203571 | 9.13.1.4 ↗ | beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like › DUF3237 | 0.56 | 41.0 | 4.12e-01 | 74.5% | 92.9% |
| 3728259 | 4252.1.1.12 ↗ | beta barrels › AttH-like › AttH-like › AttH-like › DUF7064 | 0.55 | 36.0 | 3.79e-01 | 90.8% | 73.6% |
| 3840002 | 5084.1.1.15 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP | 0.55 | 47.0 | 4.27e-01 | 90.1% | 96.2% |
| 3506244 | 5084.1.1.16 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Ail_Lom | 0.53 | 45.0 | 4.18e-01 | 90.1% | 94.8% |
| 4014757 | 9.13.1.4 ↗ | beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like › DUF3237 | 0.52 | 41.0 | 4.17e-01 | 80.9% | 92.6% |
| 200662 | 5084.1.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like | 0.52 | 44.0 | 3.86e-01 | 90.1% | 94.7% |
| 1298172 | 5084.5.1.8 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › KdgM | 0.51 | 37.0 | 3.52e-01 | 75.2% | 94.2% |
| 3974058 | 5084.5.1.28 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › CopB | 0.51 | 39.0 | 3.41e-01 | 87.9% | 53.8% |