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LR881103.1__CAD5235977.1__JCHPOGMJ_00008__00008

Bact-Vir

LR881103.1__CAD5235977.1__JCHPOGMJ_00008__00008

Identity

Accession:
LR881103 ↗
Kingdom:
phage

Quality

86.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Escherichia_phage_vB_KppS-Ant

TaxID: 2762812

Cluster

View cluster (23 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 19-77
PDB
Domain cluster: rep: NC_031077.1__YP_009287766.1__BI095_gp34__00038__D4-59
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF05930.19 best Phage_AlpA 41.1 1.80e-10 86.4% 98.0%
CATH (24)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2zhgA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.84 66.0 5.14e-01 86.4% 41.3%
3hh0A01 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.80 63.0 5.92e-01 86.4% 70.8%
1r8eA02 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.79 64.0 5.96e-01 88.1% 71.2%
3ucsA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.79 64.0 5.35e-01 89.8% 52.5%
5d8cA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.77 60.0 4.73e-01 86.4% 40.5%
4r24B00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.77 66.0 5.82e-01 100.0% 65.9%
3qaoA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.76 60.0 4.58e-01 88.1% 37.1%
2kvvA00 1.10.1660.60 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › Putative excisionased domain DUF1233 0.76 62.0 5.67e-01 91.5% 82.1%
6hn7B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 58.0 5.47e-01 89.8% 73.6%
2jmlA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.71 56.0 5.13e-01 89.8% 66.7%
3gpvA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.71 54.0 4.45e-01 84.7% 44.2%
1z4hA01 1.10.238.160 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › 0.69 53.0 5.36e-01 86.4% 86.2%
3ez2A01 1.10.1660.30 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.66 52.0 4.98e-01 89.8% 91.4%
4c3iA04 1.10.274.100 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › RNA polymerase Rpb1, domain 3 0.59 52.0 3.81e-01 100.0% 39.8%
4y4mC00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.56 45.0 3.01e-01 98.3% 20.8%
2cxiA01 3.30.56.10 Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › 0.56 42.0 3.94e-01 86.4% 97.5%
2nyxB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 44.0 3.45e-01 93.2% 40.8%
5xnsC00 1.10.10.580 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Structural maintenance of chromosome 1. Chain E 0.55 44.0 4.22e-01 93.2% 80.0%
4asnA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 44.0 3.97e-01 96.6% 67.8%
6qpqB00 1.10.10.580 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Structural maintenance of chromosome 1. Chain E 0.53 44.0 4.09e-01 98.3% 87.7%
2qwwC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 39.0 3.08e-01 84.7% 39.9%
3dwbA02 1.10.1380.10 Mainly Alpha › Orthogonal Bundle › Neutral endopeptidase; domain 2 › Neutral endopeptidase , domain2 0.52 43.0 2.77e-01 98.3% 58.0%
5by7A01 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.51 39.0 2.80e-01 88.1% 84.3%
2ek5B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 37.0 3.13e-01 81.4% 53.2%
ECOD (78)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3980161 101.1.9.45 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › Phage_AlpA 0.88 75.0 7.76e-01 94.9% 98.2%
4932995 101.1.9.16 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.86 67.0 7.13e-01 84.7% 98.0%
4994568 101.1.9.36 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR 0.86 70.0 7.24e-01 89.8% 94.5%
4672676 101.1.9.17 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.85 69.0 5.16e-01 88.1% 37.1%
3288603 101.1.9.17 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.85 66.0 6.03e-01 83.1% 65.3%
5075145 101.1.9.16 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.84 68.0 6.57e-01 86.4% 83.1%
3942751 101.1.9.16 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.84 68.0 5.33e-01 88.1% 45.0%
4933561 101.1.9.16 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.84 68.0 7.03e-01 89.8% 94.5%
5064906 101.1.9.17 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.83 67.0 6.91e-01 89.8% 94.5%
4197446 101.1.9.17 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.83 67.0 5.08e-01 88.1% 38.5%
5041445 101.1.9.17 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.83 68.0 5.89e-01 89.8% 58.9%
3288205 101.1.9.17 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.82 64.0 5.80e-01 86.4% 62.5%
3966930 101.1.9.82 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.82 67.0 5.38e-01 89.8% 47.3%
3955723 101.1.9.16 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.82 64.0 6.85e-01 88.1% 100.0%
4488952 101.1.9.82 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.82 63.0 5.09e-01 83.1% 44.5%
3284686 101.1.9.84 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR, MerR_1 0.82 66.0 4.35e-01 88.1% 96.5%
3965196 101.1.9.0 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain 0.82 70.0 6.98e-01 91.5% 91.7%
3941467 101.1.9.17 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.82 65.0 5.86e-01 86.4% 63.7%
3954355 101.1.9.82 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.82 63.0 5.08e-01 83.1% 44.5%
3954861 101.1.9.0 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain 0.81 64.0 6.65e-01 86.4% 92.7%
3980766 101.1.9.0 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain 0.81 63.0 5.07e-01 83.1% 44.5%
3281621 101.1.9.16 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.81 67.0 6.88e-01 89.8% 96.4%
3286117 101.1.9.82 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.81 64.0 5.01e-01 89.8% 40.8%
2527708 101.1.9.82 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.81 62.0 4.63e-01 83.1% 34.3%
4980892 101.1.9.17 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.81 64.0 5.05e-01 86.4% 42.5%
3970754 101.1.9.0 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain 0.81 66.0 5.97e-01 89.8% 66.3%
4096952 101.1.9.17 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.81 66.0 5.21e-01 88.1% 46.1%
3290892 101.1.9.17 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.81 66.0 5.43e-01 89.8% 50.5%
3291061 101.1.9.82 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.81 63.0 5.02e-01 84.7% 44.3%
3286164 101.1.9.17 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.81 60.0 3.95e-01 79.7% 20.4%
4031764 101.1.9.17 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.81 62.0 4.66e-01 83.1% 35.5%
4284807 101.1.9.82 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.80 62.0 4.64e-01 83.1% 35.0%
3291393 101.1.9.82 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.80 66.0 5.26e-01 89.8% 47.0%
4198222 101.1.9.36 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR 0.80 67.0 6.34e-01 93.2% 77.1%
4031948 101.1.9.82 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.80 64.0 5.15e-01 89.8% 45.2%
3281073 101.1.9.17 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.80 64.0 5.23e-01 86.4% 49.5%
1068666 101.1.9.18 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_2 0.80 67.0 5.57e-01 93.2% 54.0%
3960386 101.1.9.0 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain 0.80 66.0 6.56e-01 89.8% 98.3%
3948487 101.1.9.82 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.79 62.0 4.71e-01 84.7% 37.0%
3590098 101.1.9.82 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.79 62.0 5.01e-01 86.4% 44.3%
4034325 101.1.9.17 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.79 63.0 4.94e-01 88.1% 41.6%
4101677 101.1.9.17 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.79 63.0 4.83e-01 89.8% 38.5%
3281871 101.1.9.17 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.79 63.0 4.93e-01 86.4% 42.5%
4061721 101.1.9.82 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.79 62.0 4.81e-01 86.4% 39.2%
3285380 101.1.9.82 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.79 64.0 5.00e-01 89.8% 42.4%
3290900 101.1.9.17 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.79 64.0 4.95e-01 89.8% 40.8%
3945289 101.1.9.82 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.79 62.0 4.84e-01 86.4% 40.8%
4504812 101.1.9.17 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.78 65.0 5.77e-01 91.5% 63.5%
4564454 101.1.9.17 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.78 63.0 5.18e-01 88.1% 49.5%
3943313 101.1.9.17 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.78 63.0 5.03e-01 88.1% 45.2%
4536234 101.1.9.82 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.78 63.0 5.10e-01 89.8% 46.1%
4334333 101.1.9.1 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR,MerR-DNA-bind 0.78 66.0 4.97e-01 94.9% 39.3%
4117084 101.1.9.0 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain 0.78 64.0 5.38e-01 91.5% 58.0%
3587879 101.1.9.36 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR 0.78 63.0 5.14e-01 89.8% 48.2%
2967124 101.1.9.16 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.78 64.0 6.11e-01 91.5% 81.2%
2168161 101.1.9.16 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.78 62.0 6.28e-01 89.8% 91.2%
4668445 101.1.9.17 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.78 62.0 6.35e-01 88.1% 94.5%
4117490 101.1.9.82 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.77 64.0 4.92e-01 91.5% 41.5%
3284505 101.1.9.36 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR 0.77 63.0 5.07e-01 91.5% 47.0%
3586960 101.1.9.17 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.77 64.0 5.42e-01 91.5% 57.9%
4668740 101.1.9.0 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain 0.76 63.0 5.20e-01 91.5% 51.4%
3946914 101.1.9.82 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.76 60.0 4.64e-01 86.4% 39.2%
1394838 101.1.9.17 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.76 60.0 4.58e-01 88.1% 37.1%
1844183 101.1.9.17 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.76 59.0 4.59e-01 86.4% 38.6%
3957229 101.1.9.0 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain 0.75 60.0 6.00e-01 89.8% 95.0%
3387245 101.1.9.17 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.74 57.0 4.45e-01 86.4% 37.8%
4951929 101.1.9.17 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.73 60.0 5.56e-01 91.5% 72.0%
2519512 101.1.9.11 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › Phage_Nu1 0.73 58.0 5.47e-01 89.8% 73.6%
163446 101.1.9.17 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.71 56.0 5.13e-01 89.8% 66.7%
3587522 101.1.9.0 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain 0.69 54.0 5.13e-01 88.1% 74.3%
3948669 101.1.9.26 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › YfeC-like 0.65 52.0 4.31e-01 93.2% 51.3%
3989255 101.1.9.141 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › DUF536, HTH_24 0.63 49.0 3.70e-01 89.8% 33.1%
4316703 101.1.9.0 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain 0.62 48.0 4.63e-01 86.4% 87.1%
3179612 101.1.9.0 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain 0.60 47.0 4.50e-01 89.8% 77.1%
4626742 101.1.9.0 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain 0.54 40.0 3.79e-01 84.7% 94.7%
4934922 101.1.9.0 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain 0.53 40.0 3.84e-01 88.1% 97.3%
4999909 101.1.9.134 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › DUF2067 0.52 38.0 3.95e-01 86.4% 94.5%
5024286 101.1.9.134 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › DUF2067 0.51 39.0 3.78e-01 89.8% 77.1%