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LR881104.1__CAD5236041.1__LLCLJKAH_00052__00052

Bact-Vir

LR881104.1__CAD5236041.1__LLCLJKAH_00052__00052

Identity

Accession:
LR881104 ↗
Kingdom:
phage

Quality

71.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Chimalliviridae› Eowynvirus› Klebsiella_phage_vB_KvM-Eowyn

TaxID: 2762819

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 14-162
PDB
Domain cluster: rep: MF042360.1__ARV76824.1__PHABIO_193__00193__D3-135
CATH (53)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2apoA03 3.30.70.3190 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.71 39.0 4.87e-01 88.6% 87.0%
4pg4B03 3.30.70.3100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.65 30.0 4.09e-01 82.6% 85.3%
5w7tA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.65 34.0 4.05e-01 71.1% 75.3%
1vq8S00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.64 35.0 4.59e-01 100.0% 97.5%
5mmiU01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.63 35.0 4.61e-01 81.9% 98.8%
4lfhD02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 34.0 4.33e-01 98.7% 91.8%
3bp6B02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 37.0 4.56e-01 98.7% 96.6%
3lpxB02 3.30.1360.40 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.62 37.0 4.51e-01 90.6% 93.6%
2ca9A02 3.30.70.1150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 0.62 30.0 3.78e-01 76.5% 76.4%
1t7vA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 36.0 4.44e-01 98.7% 97.8%
4bfeA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 32.0 4.18e-01 98.0% 93.8%
1blxA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.59 34.0 4.10e-01 72.5% 88.0%
1mruA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.59 32.0 3.86e-01 71.1% 81.5%
5qinA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.59 31.0 3.87e-01 77.9% 84.7%
3n79A01 3.30.70.1710 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › BMC (bacterial microcompartment) domain 0.59 30.0 3.99e-01 89.3% 92.3%
2go8A01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 30.0 4.03e-01 91.9% 95.9%
2ausC02 3.30.2350.10 Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › Pseudouridine synthase 0.59 39.0 3.63e-01 90.6% 52.6%
2n3lA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.58 32.0 4.01e-01 93.3% 88.8%
2od4B01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 34.0 4.31e-01 89.9% 97.8%
5yppA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.58 29.0 3.68e-01 87.9% 80.0%
2raqA01 3.30.70.1340 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › MTH889-like domain 0.57 29.0 3.71e-01 87.9% 83.5%
2nyiA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.57 30.0 3.91e-01 89.9% 91.4%
2lqjA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.57 33.0 4.04e-01 90.6% 89.4%
3pg1A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.57 33.0 3.55e-01 71.1% 64.3%
3ibwA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.57 31.0 3.96e-01 89.9% 94.9%
2f1fA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.57 31.0 4.06e-01 89.9% 98.7%
2pd1A01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 35.0 4.30e-01 91.9% 96.8%
2fbjH02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 27.0 3.68e-01 70.5% 90.4%
3e8oB00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 34.0 4.09e-01 87.9% 89.0%
2dnnA01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.56 31.0 3.87e-01 91.9% 92.7%
3g2fA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.56 30.0 3.69e-01 99.3% 85.1%
3f62A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 36.0 4.13e-01 98.7% 90.7%
3smzA03 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.55 30.0 3.62e-01 94.0% 79.4%
4za1C00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 32.0 3.91e-01 91.3% 90.2%
3b82A06 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 28.0 3.07e-01 93.3% 58.7%
1u8sA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.54 30.0 3.69e-01 89.9% 89.5%
1q5yC00 3.30.70.1150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 0.54 29.0 3.74e-01 89.9% 92.7%
6ue9L02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 36.0 3.93e-01 98.7% 82.8%
5is2A01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.53 30.0 3.70e-01 90.6% 89.0%
3mjgX01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 29.0 3.68e-01 98.0% 90.7%
8ediA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 35.0 3.96e-01 98.7% 93.3%
4djbA00 3.30.70.2870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Mastadenovirus E4 ORF3 0.53 38.0 4.17e-01 89.9% 93.2%
1bwvA01 3.30.70.150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RuBisCO large subunit, N-terminal domain 0.53 36.0 3.83e-01 85.2% 79.7%
1xmbA02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 33.0 3.84e-01 89.3% 91.1%
2gffA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 30.0 3.56e-01 83.2% 84.4%
1k8wA01 3.30.2350.10 Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › Pseudouridine synthase 0.52 45.0 3.81e-01 91.3% 61.4%
2qswA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.52 29.0 3.59e-01 75.8% 87.8%
2efjA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 29.0 2.59e-01 73.2% 37.4%
4qu7A00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.52 27.0 3.43e-01 91.3% 88.9%
7dl8C01 3.30.110.20 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain 0.51 28.0 3.54e-01 75.2% 88.8%
3hx9B00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 31.0 3.66e-01 89.3% 89.8%
1r3eA01 3.30.2350.10 Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › Pseudouridine synthase 0.51 44.0 3.89e-01 94.6% 67.4%
1lq9A00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.50 33.0 3.79e-01 92.6% 89.3%
ECOD (59)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4995675 50.1.1.0 ↗ beta barrels › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin 0.75 70.0 6.77e-01 100.0% 96.4%
3436180 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.69 34.0 4.74e-01 89.9% 98.6%
3664564 304.109.1.0 ↗ a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e 0.68 30.0 4.50e-01 92.6% 100.0%
3650337 304.8.1.2 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.68 33.0 3.52e-01 73.2% 51.5%
3817212 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.67 33.0 4.68e-01 92.6% 100.0%
4314849 304.16.1.1 ↗ a+b two layers › Alpha-beta plaits › eEF-1beta-like › eEF-1beta-like › EF1_GNE 0.66 35.0 4.43e-01 84.6% 87.1%
3321864 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.66 41.0 4.70e-01 93.3% 83.6%
4292806 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.64 40.0 4.67e-01 95.3% 88.6%
4238391 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.64 41.0 4.61e-01 96.0% 83.5%
4114421 304.8.1.2 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.64 40.0 4.66e-01 96.0% 88.6%
3357573 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.63 37.0 4.21e-01 90.6% 76.4%
5065805 304.8.1.22 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › AHAS-like_ACT 0.63 31.0 4.01e-01 83.2% 81.2%
3317802 304.8.1.45 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.63 39.0 4.68e-01 91.3% 94.7%
3445191 304.8.1.45 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.63 32.0 4.31e-01 94.6% 94.7%
3988189 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.63 31.0 4.14e-01 89.9% 87.5%
3464795 304.8.1.2 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.62 36.0 3.98e-01 90.6% 70.0%
3329478 304.8.1.2 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.62 39.0 4.35e-01 93.3% 78.3%
3670830 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.62 33.0 4.43e-01 79.2% 100.0%
4151808 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.62 39.0 4.45e-01 95.3% 84.5%
4223968 304.5.1.7 ↗ a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 0.62 30.0 4.03e-01 89.3% 86.3%
3677817 304.12.1.0 ↗ a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 0.61 39.0 3.84e-01 87.2% 57.6%
3921212 11.1.1.96 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set 0.61 38.0 4.47e-01 98.7% 91.0%
4952685 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.61 33.0 4.27e-01 91.3% 96.2%
4666632 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.61 33.0 3.96e-01 75.2% 78.0%
4673811 304.8.1.8 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_4 0.61 32.0 4.05e-01 89.9% 85.4%
4932501 304.109.1.0 ↗ a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e 0.61 36.0 4.22e-01 82.6% 85.0%
4667438 304.8.1.53 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › GlnD_5th 0.60 40.0 3.96e-01 96.6% 63.2%
3366280 304.8.1.47 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_ACR9_3rd 0.60 38.0 4.48e-01 88.6% 94.0%
3593122 304.109.1.0 ↗ a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e 0.60 35.0 3.90e-01 82.6% 71.7%
5066425 304.5.1.7 ↗ a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 0.60 30.0 3.92e-01 89.3% 87.5%
4413471 304.5.1.7 ↗ a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 0.60 29.0 3.94e-01 89.3% 90.7%
3241973 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 34.0 4.07e-01 95.3% 84.0%
3450309 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.59 37.0 4.44e-01 91.9% 97.9%
3838547 304.8.1.2 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.58 31.0 4.03e-01 94.0% 94.9%
3367454 304.8.1.2 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.58 40.0 3.78e-01 91.3% 58.9%
5001314 304.102.1.4 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N 0.57 43.0 3.60e-01 94.6% 46.9%
5009365 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.57 31.0 4.07e-01 89.9% 97.5%
4557453 304.102.1.9 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N, DKCLD, TruB_C_2, Pus10_C 0.57 42.0 3.57e-01 94.6% 46.5%
5036917 304.102.1.13 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_C_2 0.57 42.0 4.20e-01 94.0% 75.3%
5002753 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.57 30.0 3.73e-01 71.1% 85.9%
5058386 304.102.1.4 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N 0.56 42.0 3.91e-01 94.6% 61.1%
4994637 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.56 32.0 3.81e-01 94.0% 82.0%
4020643 304.8.1.1 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › Thr_dehydrat_C 0.56 31.0 3.77e-01 91.9% 84.2%
4254304 304.102.1.4 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N 0.56 45.0 3.93e-01 90.6% 56.9%
4364438 304.8.1.5 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL 0.56 30.0 3.73e-01 75.8% 84.0%
5053336 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.55 33.0 3.91e-01 89.3% 86.0%
3990697 304.9.1.0 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.55 34.0 4.09e-01 89.9% 95.8%
4126423 304.102.1.6 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N,TruB_C_2 0.55 44.0 3.94e-01 90.6% 59.5%
4064787 304.8.1.5 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL 0.54 30.0 3.64e-01 75.8% 83.2%
302769 304.8.1.4 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C 0.54 30.0 3.56e-01 89.9% 80.0%
4403911 304.8.1.5 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL 0.54 30.0 3.60e-01 76.5% 80.0%
4558386 304.102.1.4 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N 0.53 45.0 3.98e-01 90.6% 69.2%
3784654 304.8.1.1 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › Thr_dehydrat_C 0.53 30.0 3.60e-01 92.6% 85.1%
3285516 304.5.1.0 ↗ a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like 0.53 29.0 3.73e-01 90.6% 94.1%
4197562 304.102.1.6 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N,TruB_C_2 0.52 44.0 3.71e-01 90.6% 60.0%
4959305 304.4.1.0 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.52 35.0 3.79e-01 89.9% 81.6%
4201836 304.102.1.3 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 0.52 46.0 3.91e-01 98.0% 74.0%
4141813 304.102.1.6 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N,TruB_C_2 0.51 43.0 3.68e-01 90.6% 63.0%
3415540 11.1.1.108 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 0.51 35.0 3.72e-01 98.7% 82.4%