Back to structures

LR881104.1__CAD5236099.1__LLCLJKAH_00110__00110

Bact-Vir

LR881104.1__CAD5236099.1__LLCLJKAH_00110__00110

Identity

Accession:
LR881104 ↗
Kingdom:
phage

Quality

77.6 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 56-196
PDB
CATH (22)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2b6cA02 1.25.40.290 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › ARM repeat domains 0.65 36.0 4.24e-01 100.0% 77.3%
5cwkA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.65 44.0 4.12e-01 100.0% 57.1%
4agsB04 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.63 45.0 4.65e-01 75.9% 78.2%
1b48A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.59 41.0 4.60e-01 73.8% 92.7%
8g52B01 1.25.40.920 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › TRAP transporter T-component 0.57 50.0 4.12e-01 100.0% 76.1%
3gs3A00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.56 45.0 3.80e-01 100.0% 49.0%
4leuA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.55 44.0 4.09e-01 97.9% 66.5%
3ieeA02 1.20.58.820 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Uncharacterised protein PF12889, C-terminal DUF3829 0.55 36.0 4.08e-01 72.3% 88.3%
2v7kA01 1.20.58.1320 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.55 38.0 4.11e-01 73.8% 85.2%
2xl4A00 1.20.120.1420 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › LntA helical domain 0.55 38.0 3.81e-01 71.6% 85.0%
2bnxB01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.54 48.0 4.07e-01 100.0% 65.0%
3zpjA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.54 45.0 3.39e-01 97.9% 36.2%
3dwcA00 1.10.1370.30 Mainly Alpha › Orthogonal Bundle › Neurolysin; domain 3 › 0.54 42.0 2.91e-01 83.7% 82.8%
4k0dA00 1.20.120.1730 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.53 34.0 3.40e-01 83.7% 60.8%
3l9tA02 1.25.40.290 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › ARM repeat domains 0.53 41.0 4.45e-01 99.3% 99.2%
3c5wA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.52 44.0 3.83e-01 97.9% 57.9%
1nzeA00 1.20.120.290 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Oxygen-evolving enhancer protein 3 (PsbQ), four-helix up-down bundle 0.52 34.0 3.77e-01 72.3% 83.0%
5cwhA01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.51 42.0 4.07e-01 100.0% 79.5%
8cdaB03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.51 31.0 3.00e-01 87.9% 53.5%
3a8pA02 6.10.140.680 Special › Helix non-globular › Helix Hairpins › 0.51 35.0 3.88e-01 88.7% 86.8%
1h2tC03 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.50 43.0 3.65e-01 99.3% 55.0%
3cf6E03 1.20.870.10 Mainly Alpha › Up-down Bundle › Son of sevenless (SoS) protein; Chain S, domain 1 › Son of sevenless (SoS) protein Chain: S domain 1 0.50 41.0 4.23e-01 89.4% 96.9%
ECOD (21)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3660190 109.4.1.935 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TOR1L1_N 0.65 44.0 4.14e-01 100.0% 55.4%
3376126 109.4.1.1718 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF26716 0.62 44.0 4.79e-01 82.3% 89.6%
3581224 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.59 45.0 3.62e-01 96.5% 39.3%
4981325 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.58 42.0 3.40e-01 94.3% 36.9%
4019971 109.4.1.451 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Iml2-TPR_39 0.57 51.0 3.83e-01 100.0% 54.6%
5012823 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.57 44.0 3.22e-01 95.0% 28.4%
3660416 109.4.1.2686 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Voltage_CLC 0.55 38.0 3.57e-01 97.9% 55.6%
3486898 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.55 46.0 3.79e-01 97.2% 48.8%
3365518 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.55 44.0 3.91e-01 95.7% 58.6%
3414246 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.54 42.0 4.26e-01 85.1% 83.6%
3324745 109.4.1.1154 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › INTS7_N 0.53 48.0 3.18e-01 100.0% 28.1%
3245848 109.4.1.3118 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, TPR_8, TPR_16 0.53 47.0 3.05e-01 100.0% 42.4%
3741679 109.4.1.25 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DIL 0.53 46.0 3.27e-01 100.0% 31.0%
3669847 109.4.1.883 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.52 44.0 3.81e-01 99.3% 56.4%
3417469 109.4.1.1256 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3 0.52 40.0 3.72e-01 92.9% 63.3%
3257510 604.6.1.0 alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain 0.52 40.0 4.00e-01 100.0% 78.6%
3192841 109.4.1.182 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Sec7-like_HUS,DCB 0.51 46.0 3.37e-01 99.3% 64.3%
3256137 601.4.1.0 alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains 0.51 35.0 3.47e-01 70.2% 74.0%
3511115 109.4.1.623 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Cnd1 0.51 40.0 4.02e-01 97.9% 82.0%
4983229 3896.1.1.0 alpha duplicates or obligate multimers › Intramembrane CDP-DAG synthetase-related › Intramembrane CDP-DAG synthetase-related › Intramembrane CDP-DAG synthetase 0.50 42.0 3.73e-01 89.4% 98.5%
3452617 5059.1.1.24 alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › PUNUT 0.50 40.0 3.08e-01 85.8% 71.3%