←Back to structures

LR881104.1__CAD5236181.1__LLCLJKAH_00192__00192

Bact-Vir

LR881104.1__CAD5236181.1__LLCLJKAH_00192__00192

Identity

Accession:
LR881104 ↗
Kingdom:
phage

Quality

67.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Chimalliviridae› Eowynvirus› Klebsiella_phage_vB_KvM-Eowyn

TaxID: 2762819

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 16-21_180-253
PDB
D2 high residues 33-175
PDB
Domain cluster: representative
CATH (36)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1m62A00 1.20.58.120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain 0.67 36.0 4.50e-01 85.3% 86.2%
3nvoB02 1.20.58.340 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region 0.62 44.0 4.89e-01 88.1% 88.8%
5figA00 1.20.1270.360 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.62 42.0 4.96e-01 87.4% 99.0%
3eabE00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.61 34.0 4.26e-01 79.7% 90.7%
3k3uA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.61 51.0 5.19e-01 88.8% 100.0%
1u89A00 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.58 45.0 4.64e-01 95.1% 83.5%
3ck6C02 1.20.58.340 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region 0.58 40.0 4.31e-01 88.1% 83.2%
2d05A02 1.20.141.10 Mainly Alpha › Up-down Bundle › Chitosanase, subunit A; domain 1 › Chitosanase, subunit A, domain 1 0.58 31.0 3.47e-01 82.5% 64.9%
1s35A01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.58 40.0 4.63e-01 85.3% 99.0%
3lmfA00 1.20.1270.360 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.58 40.0 4.59e-01 95.1% 93.6%
1wcrA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.58 37.0 4.33e-01 86.0% 90.3%
1orjD00 1.20.120.340 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS 0.58 37.0 3.96e-01 81.8% 73.6%
2ntxA02 1.20.58.1310 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › PRONE domain, subdomain 2 0.57 37.0 4.22e-01 73.4% 90.3%
1tjoB00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.57 41.0 3.81e-01 93.7% 60.0%
2lseA00 1.20.120.1360 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.57 34.0 3.88e-01 89.5% 81.2%
1x8zB00 1.20.140.40 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Invertase/pectin methylesterase inhibitor family protein 0.56 43.0 4.33e-01 93.0% 78.2%
1eqfA02 1.20.920.10 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like 0.56 38.0 4.06e-01 93.7% 80.0%
1vw4T01 6.10.330.20 Special › Helix non-globular › Monooxygenase › 0.55 37.0 4.17e-01 83.2% 88.4%
1sumB02 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.55 41.0 4.45e-01 88.8% 93.2%
8d7hD01 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.55 43.0 4.04e-01 93.7% 68.2%
2yw6B00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.55 40.0 3.99e-01 91.6% 72.0%
2qupA00 1.20.120.490 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hypothetical protein TM1646-like domain 0.55 32.0 3.52e-01 83.2% 68.9%
1ia6A00 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.53 44.0 3.14e-01 87.4% 45.2%
3mesA02 3.90.1200.10 Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe 0.53 43.0 3.45e-01 86.7% 97.9%
3anwB00 1.20.58.2050 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.52 42.0 4.01e-01 83.2% 74.7%
7sf8A01 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.52 38.0 3.23e-01 76.2% 78.4%
1otkA00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.52 40.0 3.35e-01 93.7% 48.0%
2c41C01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.51 42.0 4.19e-01 85.3% 93.3%
3fseB02 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.51 42.0 4.27e-01 87.4% 95.1%
2ib0A01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.51 41.0 4.22e-01 84.6% 93.3%
4etrB00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.51 40.0 4.29e-01 87.4% 95.9%
7rkxR01 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.51 41.0 3.31e-01 85.3% 65.0%
2wdqD00 1.20.1300.10 Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Fumarate reductase/succinate dehydrogenase, transmembrane subunit 0.51 34.0 3.84e-01 78.3% 91.4%
2l6jA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.50 31.0 3.49e-01 85.3% 79.3%
1rj1A00 1.20.140.40 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Invertase/pectin methylesterase inhibitor family protein 0.50 45.0 4.45e-01 95.1% 93.2%
2rkkA01 1.25.40.270 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Vacuolar protein sorting-associated protein vta1 0.50 45.0 4.35e-01 95.8% 97.4%
ECOD (45)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5024802 3543.1.1.14 ↗ alpha complex topology › Acid-activated urea channel › Acid-activated urea channel › Acid-activated urea channel › DUF981 0.67 41.0 3.70e-01 83.9% 46.6%
3943936 150.1.1.143 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › FUSC 0.66 43.0 4.24e-01 92.3% 62.7%
4977760 106.1.1.0 ↗ alpha arrays › Globin-like › Globin-like › Globin-like 0.61 48.0 5.21e-01 82.5% 99.2%
4303951 601.54.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › low CO2-inducible protein LCI1 › low CO2-inducible protein LCI1 0.61 48.0 5.12e-01 93.0% 92.8%
3770274 603.1.1.198 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › DUF4716 0.61 39.0 4.68e-01 85.3% 96.8%
3390666 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.61 40.0 4.19e-01 86.7% 72.3%
3267622 601.1.1.37 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › Frag1 0.61 37.0 3.93e-01 80.4% 66.9%
3572847 604.1.1.162 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › DUF4716 0.60 41.0 4.59e-01 88.1% 87.0%
4374650 601.54.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › low CO2-inducible protein LCI1 › low CO2-inducible protein LCI1 0.60 47.0 4.60e-01 93.0% 74.8%
4019714 633.21.1.0 ↗ alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 0.60 46.0 5.00e-01 93.0% 95.8%
5038471 633.21.1.1 ↗ alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 › DUF326 0.59 43.0 4.74e-01 88.8% 92.2%
4054419 604.12.1.78 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › FUSC 0.58 41.0 3.94e-01 95.1% 62.4%
3408573 633.21.1.0 ↗ alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 0.58 48.0 4.93e-01 93.7% 89.1%
3393106 633.21.1.43 ↗ alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 › DUF7775 0.58 47.0 4.95e-01 94.4% 93.1%
3733145 633.23.1.0 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin 0.57 47.0 4.84e-01 95.1% 89.3%
3482959 109.2.1.10 ↗ alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Glyco_hydro_63 0.57 46.0 3.13e-01 84.6% 55.9%
3171862 109.4.1.451 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Iml2-TPR_39 0.56 45.0 3.58e-01 83.9% 52.1%
3878975 633.21.1.23 ↗ alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 › CD20 0.56 46.0 4.67e-01 95.1% 87.1%
3194196 633.23.1.22 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin › MARVEL 0.56 47.0 4.82e-01 95.1% 90.7%
5060080 5067.1.1.4 ↗ alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › MMPL 0.55 45.0 3.05e-01 87.4% 83.7%
3689020 4121.1.1.0 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like 0.55 46.0 3.56e-01 86.7% 80.3%
5005588 5082.1.1.1 ↗ alpha bundles › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation_efflux 0.55 45.0 4.04e-01 86.0% 81.0%
3453029 611.7.1.16 ↗ alpha bundles › N-cbl like › Mixed lineage kinase domain-like (MLKL) N-terminal domain › Mixed lineage kinase domain-like (MLKL) N-terminal domain › PUB2_N 0.55 40.0 3.49e-01 91.6% 51.0%
3326634 633.4.1.1 ↗ alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI 0.54 49.0 4.57e-01 96.5% 88.6%
3833042 633.4.1.1 ↗ alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI 0.54 48.0 4.55e-01 95.1% 93.5%
3657913 633.4.1.1 ↗ alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI 0.53 48.0 4.42e-01 96.5% 91.7%
3184336 174.1.1.0 ↗ few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.53 47.0 4.64e-01 95.1% 91.0%
4152787 601.14.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › Hemerythrin › Hemerythrin 0.53 46.0 4.29e-01 95.1% 94.4%
3802402 633.22.1.0 ↗ alpha bundles › Bromodomain-like › Vitamin K epoxide reductase (VKOR) › Vitamin K epoxide reductase (VKOR) 0.52 40.0 3.94e-01 92.3% 74.2%
3536637 633.23.1.22 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin › MARVEL 0.52 45.0 4.51e-01 95.1% 91.6%
3868831 174.1.1.43 ↗ few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › CD20 0.52 45.0 4.31e-01 95.1% 80.0%
5082892 5067.1.1.0 ↗ alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain 0.52 39.0 3.70e-01 95.1% 65.9%
3400801 604.12.1.0 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.52 40.0 4.12e-01 81.8% 89.6%
4596972 150.3.1.0 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › 4-helical cytokines › 4-helical cytokine 0.52 42.0 3.80e-01 95.1% 63.1%
3719175 150.1.1.0 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin 0.52 44.0 4.23e-01 92.3% 80.6%
3318287 633.4.1.1 ↗ alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI 0.52 47.0 4.35e-01 97.9% 85.6%
3663121 5069.1.1.62 ↗ alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Chloroplast_duf 0.52 37.0 4.22e-01 97.9% 100.0%
3835373 633.4.1.1 ↗ alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI 0.52 47.0 4.65e-01 97.9% 95.3%
3214864 174.1.1.0 ↗ few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.51 45.0 4.42e-01 95.1% 88.7%
3802836 633.4.1.1 ↗ alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI 0.51 46.0 4.33e-01 97.9% 90.9%
3650972 630.1.1.1 ↗ a+b complex topology › RuBisCo LSMT C-terminal, substrate-binding domain › RuBisCo LSMT C-terminal, substrate-binding domain › RuBisCo LSMT C-terminal, substrate-binding domain › Rubis-subs-bind 0.51 41.0 4.33e-01 86.0% 96.9%
3490929 133.1.1.0 ↗ alpha bundles › DH domain-like › DBL homology domain (DH-domain) › DBL homology domain (DH-domain) 0.51 40.0 3.22e-01 83.9% 89.7%
3614441 150.1.1.0 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin 0.51 42.0 4.13e-01 92.3% 80.6%
3836366 633.4.1.1 ↗ alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI 0.51 45.0 4.31e-01 95.8% 92.1%
4579811 4006.1.1.1 ↗ alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF 0.50 36.0 4.18e-01 99.3% 100.0%