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LR881104.1__CAD5236288.1__LLCLJKAH_00299__00299

Bact-Vir

LR881104.1__CAD5236288.1__LLCLJKAH_00299__00299

Identity

Accession:
LR881104 ↗
Kingdom:
phage

Quality

77.8 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 16-77
PDB
Domain cluster: representative
CATH (20)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4b6dB00 3.30.60.20 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › 0.72 57.0 5.89e-01 98.4% 93.0%
2l31A00 3.30.1740.10 Alpha Beta › 2-Layer Sandwich › first zn-finger domain of poly(adp-ribose) polymerase-1 › Zinc finger, PARP-type 0.70 56.0 4.66e-01 88.7% 56.2%
1v9xA00 3.30.1740.10 Alpha Beta › 2-Layer Sandwich › first zn-finger domain of poly(adp-ribose) polymerase-1 › Zinc finger, PARP-type 0.70 56.0 4.55e-01 87.1% 84.2%
4hi8B00 2.10.110.10 Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein 0.68 54.0 5.12e-01 85.5% 93.1%
7r71A01 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.67 55.0 5.50e-01 96.8% 89.1%
7yuiB01 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.67 45.0 4.06e-01 75.8% 50.0%
1uw0A01 3.30.1740.10 Alpha Beta › 2-Layer Sandwich › first zn-finger domain of poly(adp-ribose) polymerase-1 › Zinc finger, PARP-type 0.65 53.0 4.63e-01 91.9% 63.5%
4v3lC00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.64 51.0 5.00e-01 90.3% 79.7%
2vp7A00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.63 48.0 4.76e-01 80.6% 100.0%
3ihpA01 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.60 48.0 3.95e-01 95.2% 48.3%
2l0bA00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.59 50.0 4.46e-01 98.4% 78.0%
2xi9A02 2.30.30.670 Mainly Beta › Roll › SH3 type barrels. › Thioester domain 0.57 38.0 3.37e-01 71.0% 89.2%
4bl7A01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.56 43.0 3.72e-01 98.4% 51.5%
2x5rA01 3.30.470.40 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › 0.56 42.0 3.52e-01 83.9% 74.8%
5cbeE00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.52 35.0 3.49e-01 87.1% 65.6%
1ub1A00 3.30.890.10 Alpha Beta › 2-Layer Sandwich › Methyl-cpg-binding Protein 2; Chain A › Methyl-cpg-binding Protein 2; Chain A 0.52 37.0 3.01e-01 88.7% 37.6%
3vxvA00 3.30.890.10 Alpha Beta › 2-Layer Sandwich › Methyl-cpg-binding Protein 2; Chain A › Methyl-cpg-binding Protein 2; Chain A 0.51 38.0 3.76e-01 95.2% 76.9%
1t3aA00 3.90.1240.10 Alpha Beta › Alpha-Beta Complex › Zincin-like › "Metalloproteases (""zincins""), catalytic domain like" 0.51 43.0 2.66e-01 98.4% 23.0%
3ho6B00 3.40.50.11050 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › MARTX cysteine protease (CPD) domain 0.50 36.0 2.45e-01 77.4% 46.7%
2gtjA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.50 37.0 3.63e-01 88.7% 71.6%
ECOD (82)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3192055 386.1.1.413 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-Vps39_C 0.79 55.0 5.42e-01 75.8% 69.2%
3921354 376.1.2.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain 0.75 60.0 5.93e-01 98.4% 81.5%
3728204 377.1.1.20 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Vps39_2 0.75 54.0 5.71e-01 79.0% 85.5%
3880486 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.74 57.0 5.83e-01 96.8% 88.1%
3400916 377.1.1.20 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Vps39_2 0.72 50.0 5.72e-01 74.2% 100.0%
3776332 376.1.2.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain 0.71 54.0 5.88e-01 85.5% 100.0%
3669758 376.1.1.40 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_11 0.71 48.0 4.78e-01 71.0% 83.1%
3595549 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.71 54.0 5.24e-01 95.2% 74.3%
4944275 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.70 59.0 5.67e-01 91.9% 91.4%
3257948 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.69 58.0 5.71e-01 100.0% 86.8%
3440301 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.69 56.0 5.46e-01 96.8% 80.0%
3704076 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.69 55.0 4.75e-01 96.8% 56.8%
3827578 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.68 55.0 5.44e-01 95.2% 84.6%
3399231 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.68 46.0 4.38e-01 71.0% 58.7%
3825395 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.68 53.0 5.16e-01 95.2% 77.1%
3450650 376.1.2.20 few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › zf-RING_11 0.67 54.0 5.70e-01 87.1% 100.0%
3606405 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.67 54.0 5.13e-01 90.3% 73.3%
3724590 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.67 59.0 5.75e-01 100.0% 88.6%
3828759 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.66 45.0 5.09e-01 83.9% 97.8%
3264608 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.65 53.0 5.15e-01 90.3% 82.9%
3463608 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.64 55.0 5.29e-01 98.4% 84.3%
3371995 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.64 56.0 4.89e-01 100.0% 68.4%
3680545 376.1.1.40 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_11 0.64 54.0 4.65e-01 100.0% 59.0%
3196385 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.64 55.0 5.08e-01 98.4% 88.7%
3379445 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.63 55.0 5.21e-01 98.4% 82.7%
3546896 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.63 54.0 4.77e-01 98.4% 87.4%
3716109 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.63 54.0 4.60e-01 95.2% 67.0%
3306931 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.63 53.0 4.32e-01 95.2% 49.2%
3684536 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.63 54.0 5.00e-01 95.2% 82.5%
4028171 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.63 54.0 5.07e-01 96.8% 82.7%
3647807 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.63 54.0 4.64e-01 100.0% 62.9%
3066048 376.1.1.20 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX 0.63 46.0 4.14e-01 80.6% 54.9%
4015629 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.63 55.0 5.19e-01 100.0% 86.7%
3861410 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.63 53.0 4.47e-01 95.2% 57.1%
3438989 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.62 50.0 5.31e-01 88.7% 100.0%
3468303 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.62 54.0 4.90e-01 98.4% 81.2%
3334898 376.1.1.40 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_11 0.62 53.0 5.12e-01 95.2% 91.4%
3743231 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.62 48.0 4.58e-01 95.2% 70.7%
3366699 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.62 54.0 4.88e-01 98.4% 85.9%
3310782 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.62 53.0 5.00e-01 95.2% 89.3%
3642794 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.62 52.0 4.96e-01 100.0% 84.0%
3733988 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.62 53.0 4.85e-01 96.8% 86.7%
3365516 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.62 53.0 4.81e-01 96.8% 71.8%
3496763 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.62 53.0 5.03e-01 98.4% 82.7%
3644900 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.62 53.0 5.02e-01 96.8% 84.0%
3328008 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.62 53.0 4.96e-01 98.4% 83.5%
3353437 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.62 53.0 5.12e-01 96.8% 90.0%
3265424 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.62 53.0 5.05e-01 98.4% 84.0%
3887522 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.62 53.0 4.79e-01 96.8% 74.1%
3670656 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.62 53.0 5.04e-01 96.8% 88.0%
3528982 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.62 53.0 4.87e-01 96.8% 83.7%
3267159 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.62 53.0 4.60e-01 100.0% 64.0%
3818927 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.62 53.0 4.81e-01 96.8% 86.9%
3824369 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.61 53.0 4.39e-01 98.4% 55.7%
3375836 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.61 53.0 4.60e-01 100.0% 67.0%
3861234 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.61 53.0 4.85e-01 100.0% 78.8%
3486377 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.61 52.0 4.93e-01 96.8% 80.0%
3683843 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.61 53.0 4.74e-01 100.0% 70.0%
3446786 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.61 54.0 4.95e-01 98.4% 81.2%
3251820 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.61 52.0 4.98e-01 98.4% 84.0%
3363433 376.1.1.40 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_11 0.61 48.0 5.01e-01 85.5% 98.3%
3683145 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.61 53.0 4.41e-01 98.4% 55.5%
4019898 376.1.1.1 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.61 49.0 4.28e-01 91.9% 68.0%
3647459 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.61 52.0 4.91e-01 96.8% 85.3%
3684504 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.61 53.0 4.48e-01 98.4% 81.9%
3432480 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.61 51.0 4.89e-01 96.8% 82.7%
3808200 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.61 52.0 4.82e-01 96.8% 81.2%
3542887 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.61 52.0 4.87e-01 98.4% 83.3%
3307860 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.61 51.0 4.80e-01 98.4% 81.2%
3909802 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.60 52.0 4.45e-01 96.8% 69.0%
3853449 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.60 52.0 4.60e-01 100.0% 83.2%
3808262 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.60 51.0 4.36e-01 96.8% 61.9%
3638059 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.60 51.0 4.75e-01 96.8% 82.5%
3787949 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.60 50.0 4.32e-01 96.8% 82.7%
3414941 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.60 53.0 4.82e-01 100.0% 79.5%
3818567 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.60 52.0 4.67e-01 100.0% 88.9%
3314075 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.60 52.0 4.44e-01 100.0% 87.6%
3655538 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.60 50.0 4.54e-01 95.2% 69.4%
3573504 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.60 50.0 4.76e-01 95.2% 78.7%
3710947 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.59 51.0 4.57e-01 98.4% 83.3%
3331245 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.59 51.0 4.55e-01 98.4% 84.3%
3240281 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.59 51.0 4.65e-01 100.0% 74.1%