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LR990833.1__CAD7757462.1__ARAMI_45__00045

Bact-Vir

LR990833.1__CAD7757462.1__ARAMI_45__00045

Identity

Accession:
LR990833 ↗
Kingdom:
phage

Quality

88.7 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-61
PDB
CATH (38)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ffgA00 3.30.720.20 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Protein of unknown function DUF1797 0.82 71.0 6.42e-01 100.0% 71.2%
1a87A01 3.30.1120.60 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › Colicin 0.78 55.0 4.63e-01 78.3% 45.4%
5xd7A01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.76 58.0 4.55e-01 83.3% 45.7%
6i8xA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.75 57.0 4.22e-01 81.7% 83.9%
1p32B00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.74 65.0 4.66e-01 98.3% 54.4%
4pj2A00 2.40.128.460 Mainly Beta › Beta Barrel › Lipocalin › Periplasmic lysozyme inhibitor of I-type lysozyme 0.74 64.0 5.12e-01 98.3% 53.7%
4fczA00 3.10.450.710 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Tgt2/MlaC 0.71 51.0 3.65e-01 76.7% 27.3%
4g79A00 2.170.210.20 Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › Spindle assembly abnormal protein 6, N-terminal domain 0.69 60.0 4.67e-01 100.0% 73.1%
8axiA01 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.69 60.0 3.67e-01 98.3% 27.1%
2giaA00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.68 53.0 3.95e-01 85.0% 35.7%
3n8bA00 3.10.450.700 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.68 56.0 5.27e-01 93.3% 88.0%
5hx0A00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.68 60.0 3.68e-01 100.0% 23.0%
3u2gA02 2.60.98.40 Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › DU1608 C-terminal domain 0.68 58.0 4.60e-01 98.3% 73.6%
1yguA02 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.68 53.0 3.39e-01 85.0% 29.7%
1wchA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.67 53.0 3.38e-01 88.3% 76.6%
2qe8A00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.67 56.0 3.53e-01 96.7% 25.8%
2af5A01 2.40.128.160 Mainly Beta › Beta Barrel › Lipocalin › C1 set domains (antibody constant domain-like) 0.66 48.0 5.04e-01 90.0% 88.9%
2obdA02 3.15.10.10 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 0.65 55.0 3.94e-01 96.7% 67.2%
1k8kD02 3.30.1460.20 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.64 55.0 4.32e-01 98.3% 67.9%
4n4bA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.64 53.0 3.38e-01 95.0% 27.9%
4ioyX02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.64 48.0 3.96e-01 83.3% 45.2%
4ckmB00 2.170.210.20 Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › Spindle assembly abnormal protein 6, N-terminal domain 0.64 52.0 4.12e-01 98.3% 70.8%
4hrzB00 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.63 47.0 3.79e-01 81.7% 48.0%
3p9vA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.63 45.0 3.37e-01 76.7% 53.8%
7uzsX04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 44.0 3.80e-01 76.7% 88.5%
5evhA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.61 44.0 3.57e-01 76.7% 43.0%
3hrgA02 3.30.420.260 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Protein of unknown function DUF3822, C-terminal domain 0.61 46.0 3.82e-01 88.3% 44.7%
1g7eA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.61 50.0 4.10e-01 96.7% 95.9%
1zarA02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.60 47.0 4.30e-01 88.3% 98.8%
3mx7A00 2.40.128.180 Mainly Beta › Beta Barrel › Lipocalin › 0.59 50.0 4.47e-01 100.0% 65.6%
4ix3A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.58 42.0 3.52e-01 78.3% 81.4%
1fc6A02 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.58 43.0 3.77e-01 80.0% 82.6%
4euyA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.57 42.0 3.82e-01 81.7% 86.0%
7kx7A03 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.56 46.0 3.24e-01 96.7% 99.1%
1oo0A00 3.30.1560.10 Alpha Beta › 2-Layer Sandwich › Mago nashi protein › Mago nashi 0.55 45.0 3.53e-01 96.7% 97.9%
2jjdF02 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.54 41.0 2.79e-01 85.0% 31.7%
4avaA02 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.54 44.0 3.19e-01 93.3% 72.7%
2y23A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 41.0 3.52e-01 90.0% 77.9%
ECOD (62)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3385434 2484.1.1.261 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27038 0.81 62.0 4.63e-01 83.3% 35.0%
3966794 243.3.1.5 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › FTP 0.80 57.0 4.92e-01 75.0% 54.4%
3710314 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.77 55.0 4.07e-01 75.0% 46.9%
4034016 243.10.1.1 a+b two layers › Cystatin-like › Lin0334 protein › Lin0334 protein › DUF1433 0.77 55.0 4.45e-01 76.7% 41.7%
3322026 4210.1.1.1 a+b two layers › WGR domain › WGR domain › WGR domain › WGR 0.74 66.0 4.87e-01 100.0% 50.3%
4009698 219.1.1.109 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Toxin_15 0.74 64.0 4.43e-01 98.3% 70.2%
5040169 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.74 64.0 3.83e-01 96.7% 29.2%
3338423 3131.1.1.2 a+b two layers › FYR domain › FYR domain › FYR domain › FYRN 0.74 65.0 4.89e-01 100.0% 56.0%
3712183 101.1.12.3 alpha arrays › HTH › HTH › HTH motif inserted in other structures › SAS-6_N 0.73 65.0 4.88e-01 100.0% 79.3%
4938125 896.1.1.0 a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related 0.72 55.0 4.86e-01 81.7% 61.2%
1721532 3733.1.1.1 a+b complex topology › Orbivirus outer capsid protein VP5 › Orbivirus outer capsid protein VP5 › Orbivirus outer capsid protein VP5 › Orbi_VP5 0.72 63.0 3.66e-01 100.0% 14.0%
2812203 247.1.1.16 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_6 0.72 49.0 3.18e-01 75.0% 16.4%
5019862 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.71 53.0 4.98e-01 86.7% 65.3%
3595152 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.71 58.0 4.10e-01 88.3% 49.1%
3661480 5.1.4.224 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40_RFWD3 0.70 62.0 3.80e-01 98.3% 21.4%
3819740 284.1.3.4 a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › CCTL2_WNK 0.70 62.0 5.43e-01 100.0% 74.4%
4969774 5.1.3.26 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_2 0.70 60.0 3.75e-01 98.3% 23.7%
3299594 5.1.5.85 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40_RFWD3 0.70 61.0 4.37e-01 98.3% 46.9%
4611698 9.1.1.28 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Pallilysin 0.70 51.0 3.99e-01 78.3% 36.9%
4025559 5.1.4.74 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Vps16_N 0.69 61.0 3.73e-01 100.0% 25.2%
4949734 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.69 58.0 5.22e-01 93.3% 75.3%
3484022 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.69 61.0 3.63e-01 100.0% 25.4%
3506428 220.1.1.168 beta barrels › PH domain-like › PH domain-like › PH domain-like › Tmpp129 0.69 54.0 4.19e-01 85.0% 39.3%
3715465 331.9.1.2 a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › B2-adapt-app_C 0.69 50.0 4.05e-01 78.3% 41.7%
5002365 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.69 54.0 4.86e-01 83.3% 80.0%
3781935 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.69 52.0 4.16e-01 83.3% 86.4%
5061559 5.1.4.235 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_IFT140_1st 0.69 60.0 3.77e-01 100.0% 31.9%
3786518 4.8.1.18 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Myosin_N 0.69 55.0 5.40e-01 88.3% 93.8%
1731086 295.1.1.9 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › Imm42 0.68 58.0 4.26e-01 93.3% 57.4%
3829679 5.1.4.224 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40_RFWD3 0.68 60.0 3.63e-01 98.3% 20.0%
4160544 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.68 59.0 4.47e-01 100.0% 43.3%
5060665 5.1.11.6 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › Beta_propel 0.67 60.0 3.29e-01 100.0% 12.3%
3739384 4075.1.1.2 a+b complex topology › RGC domain › RGC domain › RGC domain › PF29130 0.67 57.0 4.85e-01 96.7% 84.8%
4006548 331.19.1.2 a+b two layers › TBP-like › Toxin RnlA N-terminal domains › Toxin RnlA N-terminal domains › RnlA_toxin_N 0.66 48.0 4.16e-01 78.3% 55.8%
3946123 11.1.1.431 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF1176 0.66 57.0 4.54e-01 100.0% 77.5%
5019856 252.2.1.0 a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like 0.66 57.0 5.09e-01 96.7% 85.9%
4944430 244.3.1.0 a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU 0.66 57.0 5.25e-01 100.0% 86.3%
4929818 861.1.1.0 a+b two layers › Mago nashi protein › Mago nashi protein › Mago nashi protein 0.66 54.0 4.17e-01 91.7% 100.0%
3238362 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.66 56.0 3.57e-01 98.3% 27.7%
4003463 220.1.1.168 beta barrels › PH domain-like › PH domain-like › PH domain-like › Tmpp129 0.65 50.0 4.02e-01 85.0% 48.8%
3273846 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.65 58.0 3.67e-01 98.3% 21.3%
3175498 5.1.4.332 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF29748 0.65 58.0 3.53e-01 100.0% 21.4%
4487396 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.64 53.0 3.24e-01 96.7% 19.8%
3696392 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.64 55.0 3.27e-01 96.7% 21.6%
4929364 896.1.1.0 a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related 0.64 48.0 4.70e-01 83.3% 78.5%
3929846 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.63 53.0 3.42e-01 96.7% 27.6%
4099513 5.1.4.307 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF29630 0.63 55.0 3.28e-01 100.0% 39.8%
4386515 330.1.1.30 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › PF27148 0.63 49.0 4.88e-01 88.3% 93.8%
3295575 284.1.3.2 a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › OSR1_C 0.63 51.0 4.53e-01 100.0% 71.0%
4321106 5.1.4.307 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF29630 0.62 52.0 3.24e-01 96.7% 25.9%
4371937 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.62 54.0 3.41e-01 100.0% 91.3%
4423214 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.61 49.0 4.15e-01 90.0% 65.7%
4653627 4252.1.1.3 beta barrels › AttH-like › AttH-like › AttH-like › DA_C 0.61 52.0 3.89e-01 100.0% 86.1%
3501861 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.60 48.0 3.97e-01 86.7% 54.3%
3967202 9.4.1.0 beta barrels › Lipocalins/Streptavidin › D-aminopeptidase, middle and C-terminal domains › D-aminopeptidase, middle and C-terminal domains 0.60 51.0 4.34e-01 98.3% 89.5%
3463184 2003.1.2.65 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FMO-like, Pyr_redox_3 0.59 47.0 2.99e-01 86.7% 35.3%
146266 295.1.1.8 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › DUF3276 0.58 49.0 4.50e-01 100.0% 83.3%
3470076 861.1.1.0 a+b two layers › Mago nashi protein › Mago nashi protein › Mago nashi protein 0.56 47.0 3.63e-01 95.0% 100.0%
4933032 244.3.1.4 a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › Lip_prot_lig_C 0.56 45.0 3.85e-01 98.3% 73.7%
1033236 295.1.1.1 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PC4 0.55 45.0 4.28e-01 93.3% 82.4%
3293481 861.1.1.1 a+b two layers › Mago nashi protein › Mago nashi protein › Mago nashi protein › Mago_nashi 0.53 44.0 3.47e-01 91.7% 100.0%
3596994 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.52 38.0 4.06e-01 80.0% 94.0%