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LR990835.2__CAI9421106.1__PORT_27__00027
Bact-VirLR990835.2__CAI9421106.1__PORT_27__00027
Identity
- Accession:
- LR990835 ↗
- Kingdom:
- phage
Quality
82.8
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Herelleviridae›
Schiekvirus›
Enterococcus_phage_Porthos
TaxID: 2795670
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-61
Domain cluster:
representative
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3p2aA01 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.70 | 44.0 | 5.04e-01 | 92.2% | 91.7% |
| 3kxtA00 | 2.30.30.610 | Mainly Beta › Roll › SH3 type barrels. › Chromatin protein Cren7 | 0.63 | 52.0 | 5.11e-01 | 98.0% | 83.9% |
| 5i4eA01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.59 | 41.0 | 4.30e-01 | 96.1% | 82.6% |
| 3weeB03 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.58 | 47.0 | 3.79e-01 | 100.0% | 78.3% |
| 3wt0A02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.56 | 46.0 | 3.34e-01 | 98.0% | 30.6% |
| 3h09A04 | 4.10.1240.40 | Few Secondary Structures › Irregular › Hormone receptor fold › | 0.56 | 41.0 | 3.85e-01 | 100.0% | 61.1% |
| 4qzvB02 | 2.20.210.30 | Mainly Beta › Single Sheet › ubp-family deubiquitinating enzyme fold › | 0.55 | 42.0 | 4.04e-01 | 98.0% | 86.8% |
| 4a2aA04 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.55 | 44.0 | 4.17e-01 | 98.0% | 75.4% |
| 3lifA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.55 | 44.0 | 3.85e-01 | 100.0% | 61.1% |
| 4oa3A00 | 3.10.310.50 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › | 0.54 | 39.0 | 2.91e-01 | 82.4% | 29.1% |
| 1k8kA04 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.54 | 45.0 | 3.82e-01 | 100.0% | 68.5% |
| 1juvA00 | 3.40.430.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A | 0.53 | 44.0 | 3.08e-01 | 100.0% | 38.3% |
| 2nrqA00 | 3.30.1440.10 | Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 | 0.52 | 38.0 | 3.03e-01 | 88.2% | 71.5% |
| 4xr7F02 | 1.10.287.3700 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.52 | 41.0 | 3.48e-01 | 90.2% | 70.0% |
| 1y89A00 | 3.40.50.1360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 44.0 | 2.92e-01 | 100.0% | 61.2% |
| 2drpA02 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.52 | 30.0 | 3.48e-01 | 88.2% | 96.6% |
| 8d3mI01 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.51 | 38.0 | 2.61e-01 | 84.3% | 21.7% |
| 4fd0A01 | 2.60.40.3630 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 41.0 | 3.71e-01 | 100.0% | 82.3% |
| 3ij3A01 | 3.40.220.10 | Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 | 0.51 | 38.0 | 3.01e-01 | 90.2% | 42.0% |
| 2j8aA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.51 | 40.0 | 3.53e-01 | 98.0% | 94.3% |
| 2rsiA02 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.51 | 29.0 | 3.35e-01 | 88.2% | 96.6% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5058894 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.82 | 60.0 | 6.38e-01 | 98.0% | 88.9% |
| 4944757 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.70 | 52.0 | 5.49e-01 | 98.0% | 93.3% |
| 3684111 | 267.1.1.3 ↗ | a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase | 0.61 | 42.0 | 2.66e-01 | 74.5% | 26.2% |
| 3252114 | 223.2.1.56 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Afi1, DENND11 | 0.60 | 45.0 | 3.28e-01 | 88.2% | 40.0% |
| 3843756 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.58 | 50.0 | 4.13e-01 | 98.0% | 52.6% |
| 4332197 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.58 | 50.0 | 4.17e-01 | 98.0% | 55.6% |
| 3944438 | 3567.1.1.0 ↗ | a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer | 0.58 | 38.0 | 3.88e-01 | 72.5% | 70.0% |
| 5049973 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.58 | 48.0 | 3.65e-01 | 100.0% | 41.4% |
| 3587273 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.58 | 49.0 | 4.72e-01 | 98.0% | 85.0% |
| 3860615 | 376.1.1.27 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 | 0.58 | 49.0 | 3.98e-01 | 98.0% | 59.0% |
| 4930539 | 375.8.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Zinc-binding domain of translation initiation factor 2 beta › Zinc-binding domain of translation initiation factor 2 beta | 0.57 | 50.0 | 4.41e-01 | 98.0% | 66.7% |
| 3468915 | 389.1.1.0 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin | 0.57 | 32.0 | 3.39e-01 | 88.2% | 62.2% |
| 3447963 | 375.3.1.0 ↗ | few secondary structure elements › Rubredoxin-like › CSL zinc finger › CSL zinc finger | 0.57 | 38.0 | 3.62e-01 | 94.1% | 56.9% |
| 4284001 | 375.3.1.2 ↗ | few secondary structure elements › Rubredoxin-like › CSL zinc finger › CSL zinc finger › zf-CSL | 0.56 | 46.0 | 4.20e-01 | 100.0% | 84.0% |
| 3474215 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.56 | 32.0 | 3.14e-01 | 88.2% | 49.1% |
| 3574820 | 386.1.1.133 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2+zf-C2H2_4 | 0.55 | 31.0 | 3.08e-01 | 88.2% | 47.3% |
| 3939505 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.55 | 31.0 | 3.43e-01 | 88.2% | 67.5% |
| 3411513 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.55 | 32.0 | 3.79e-01 | 90.2% | 96.7% |
| 3405416 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.55 | 30.0 | 3.02e-01 | 88.2% | 47.3% |
| 3491841 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.55 | 31.0 | 3.57e-01 | 88.2% | 80.0% |
| 3391697 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.55 | 31.0 | 3.64e-01 | 88.2% | 93.3% |
| 3531794 | 2484.1.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin | 0.54 | 46.0 | 3.20e-01 | 100.0% | 34.1% |
| 3226810 | 219.1.1.111 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core, Rad4 | 0.54 | 44.0 | 2.86e-01 | 100.0% | 18.2% |
| 3774316 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.53 | 33.0 | 2.81e-01 | 94.1% | 35.6% |
| 3220197 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.52 | 33.0 | 3.29e-01 | 94.1% | 60.0% |
| 3689713 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.52 | 35.0 | 3.01e-01 | 100.0% | 42.9% |
| 3611538 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.52 | 40.0 | 3.97e-01 | 92.2% | 98.2% |
| 3991703 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.51 | 42.0 | 3.94e-01 | 100.0% | 90.0% |
| 3527717 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.50 | 37.0 | 3.68e-01 | 86.3% | 79.2% |
| 3815492 | 2003.1.5.121 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › DUF1442 | 0.50 | 35.0 | 2.39e-01 | 76.5% | 30.8% |
| 3670800 | 267.1.1.3 ↗ | a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase | 0.50 | 38.0 | 2.80e-01 | 100.0% | 95.5% |