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LR990835.2__CAI9421125.1__PORT_46__00046
Bact-VirLR990835.2__CAI9421125.1__PORT_46__00046
Identity
- Accession:
- LR990835 ↗
- Kingdom:
- phage
Quality
62.2
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Herelleviridae›
Schiekvirus›
Enterococcus_phage_Porthos
TaxID: 2795670
Cluster
View cluster (5 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-91
D2
high
residues 95-183
Domain cluster:
rep: NC_012530.1__YP_002790855.1__lb338_phage_176__00176__D13-92
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF27286.1 best | YosH_C | 67.8 | 1.80e-18 | 97.8% | 91.7% |
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ziuA02 | 1.10.150.670 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Crossover junction endonuclease EME1, DNA-binding domain | 0.60 | 36.0 | 3.75e-01 | 80.9% | 63.9% |
| 3ugjA02 | 1.10.8.750 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Phosphoribosylformylglycinamidine synthase, linker domain | 0.59 | 35.0 | 4.04e-01 | 91.0% | 83.9% |
| 1y1aA02 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.55 | 40.0 | 4.04e-01 | 76.4% | 94.3% |
| 1xkoB00 | 3.40.1550.10 | Alpha Beta › 3-Layer(aba) Sandwich › Chemotaxis protein chec › CheC-like | 0.55 | 39.0 | 3.31e-01 | 76.4% | 97.5% |
| 1a3qA01 | 2.60.40.340 | Mainly Beta › Sandwich › Immunoglobulin-like › Rel homology domain (RHD), DNA-binding domain | 0.52 | 44.0 | 3.55e-01 | 95.5% | 77.7% |
| 1zhxA02 | 1.10.287.2720 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.52 | 29.0 | 3.00e-01 | 92.1% | 56.3% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3259834 | 102.1.1.41 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › EME1-MUS81_C | 0.61 | 35.0 | 3.76e-01 | 78.7% | 63.7% |
| 4505595 | 605.6.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › HP1531-like › HP1531-like | 0.60 | 33.0 | 3.20e-01 | 77.5% | 47.0% |
| 1320399 | 109.4.1.162 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Nup192 | 0.55 | 32.0 | 2.01e-01 | 84.3% | 9.0% |
| 3579297 | 603.3.1.1 ↗ | alpha bundles › STAT-like › CAPPD, an extracellular domain of amyloid beta A4 protein › CAPPD, an extracellular domain of amyloid beta A4 protein › APP_E2 | 0.52 | 43.0 | 3.47e-01 | 87.6% | 89.7% |
| 2474881 | 397.7.1.0 ↗ | few secondary structure elements › Toxic hairpin › Ribosome-inactivating protein luffin P1 › Ribosome-inactivating protein luffin P1 | 0.52 | 27.0 | 3.48e-01 | 86.5% | 93.6% |
| 3279149 | 386.1.1.65 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › DUF1059 | 0.50 | 31.0 | 3.65e-01 | 93.3% | 93.3% |