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LR990835.2__CAI9421213.1__PORT_134__00134

Bact-Vir

LR990835.2__CAI9421213.1__PORT_134__00134

Identity

Accession:
LR990835 ↗
Kingdom:
phage

Quality

76.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Herelleviridae› Schiekvirus› Enterococcus_phage_Porthos

TaxID: 2795670

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-44
PDB
Domain cluster: representative
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2aj6A00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.73 45.0 3.24e-01 76.7% 22.5%
3jsjC00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.64 48.0 3.15e-01 81.4% 63.9%
3vm9A02 6.10.140.2110 Special › Helix non-globular › Helix Hairpins › 0.64 49.0 4.39e-01 93.0% 61.4%
7ccmB01 1.10.437.10 Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like 0.62 50.0 3.41e-01 88.4% 48.3%
2qvwB05 1.10.1740.150 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › 0.62 44.0 3.68e-01 95.3% 43.4%
4hehA01 1.10.1240.10 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain 0.60 53.0 4.24e-01 100.0% 91.6%
2e9xB02 1.20.58.1020 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.59 50.0 3.76e-01 95.3% 38.5%
2b67A00 3.40.109.10 Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase 0.59 52.0 3.33e-01 97.7% 51.0%
4dwlA00 1.20.1440.60 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence 0.58 51.0 3.81e-01 100.0% 59.3%
4hlyA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 37.0 2.85e-01 88.4% 26.4%
3gaaB00 3.40.50.10900 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › PAC-like subunit 0.57 46.0 2.92e-01 95.3% 29.8%
2zb9A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.55 38.0 3.68e-01 74.4% 90.0%
3bz6A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 47.0 3.73e-01 97.7% 94.4%
8db3B02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 49.0 3.10e-01 100.0% 28.8%
2o6kA00 1.10.150.260 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › YozE SAM-like 0.55 47.0 3.93e-01 95.3% 98.6%
3h0dB02 1.10.1200.150 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Transcriptional repressor of class III stress genes, C-terminal domain 0.52 45.0 3.70e-01 100.0% 60.5%
ECOD (17)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3673793 386.1.1.4 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-BED 0.69 47.0 4.16e-01 72.1% 100.0%
2906440 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.67 50.0 4.11e-01 79.1% 84.9%
4116935 4033.1.1.1 ↗ alpha arrays › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA_dh_N 0.64 54.0 3.93e-01 95.3% 38.4%
5032273 2005.1.1.4 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase 0.64 48.0 2.95e-01 86.0% 31.1%
3633621 192.5.1.16 ↗ alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › PF26729 0.63 53.0 4.32e-01 95.3% 51.2%
4432304 3390.1.1.0 ↗ extended segments › Photosystem II reaction center protein T, PsbT › Photosystem II reaction center protein T, PsbT › Photosystem II reaction center protein T, PsbT 0.62 53.0 5.12e-01 100.0% 84.0%
3448849 605.8.1.5 ↗ alpha duplicates or obligate multimers › ROP-like › BAS1536-like › BAS1536-like › Med26 0.61 49.0 4.31e-01 90.7% 63.1%
5015083 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.61 42.0 3.43e-01 72.1% 70.0%
4244986 192.6.1.1 ↗ alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain › ATP-synt_DE 0.60 48.0 4.77e-01 95.3% 84.4%
3641328 206.1.1.15 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Fructosamin_kin 0.59 47.0 2.94e-01 93.0% 54.3%
4952681 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.59 45.0 3.66e-01 83.7% 71.2%
3285523 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.56 38.0 3.39e-01 95.3% 50.0%
2474881 397.7.1.0 ↗ few secondary structure elements › Toxic hairpin › Ribosome-inactivating protein luffin P1 › Ribosome-inactivating protein luffin P1 0.56 45.0 4.47e-01 100.0% 89.4%
4996486 2006.1.4.36 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN_3 0.54 42.0 3.05e-01 100.0% 27.5%
4928203 2005.1.1.18 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase 0.53 45.0 2.93e-01 95.3% 28.6%
5074632 2005.1.1.4 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase 0.51 37.0 2.43e-01 100.0% 55.6%
3628813 2005.1.1.4 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase 0.50 39.0 2.43e-01 95.3% 57.9%