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LR991625.1__CAD7767792.1__DAR_48__00048
Bact-VirLR991625.1__CAD7767792.1__DAR_48__00048
Identity
- Accession:
- LR991625 ↗
- Kingdom:
- phage
Quality
90.1
mean pLDDT
Taxonomy
TaxID: 2795667
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-61
Domain cluster:
representative
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2r01A02 | 2.20.180.10 | Mainly Beta › Single Sheet › putative fmn-dependent nitroreductase like fold › putative fmn-dependent nitroreductase like domains | 0.67 | 34.0 | 3.93e-01 | 78.3% | 69.0% |
| 3edsA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.64 | 46.0 | 3.67e-01 | 80.0% | 73.7% |
| 6ixyA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 45.0 | 3.52e-01 | 81.7% | 98.5% |
| 1g8lA04 | 2.40.340.10 | Mainly Beta › Beta Barrel › Beta-clip › MoeA, C-terminal, domain IV | 0.60 | 40.0 | 3.76e-01 | 88.3% | 55.4% |
| 4gxbA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.60 | 46.0 | 3.99e-01 | 85.0% | 92.8% |
| 1p77A01 | 3.40.50.10860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 | 0.60 | 38.0 | 2.91e-01 | 100.0% | 26.2% |
| 3gg6A00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.60 | 47.0 | 3.63e-01 | 88.3% | 60.4% |
| 1vc9A01 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.59 | 42.0 | 3.44e-01 | 78.3% | 64.8% |
| 3bb9B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 48.0 | 3.91e-01 | 98.3% | 87.2% |
| 4b7oA01 | 2.170.130.10 | Mainly Beta › Beta Complex › Ferric Hydroxamate Uptake Protein; Chain A, domain 1 › TonB-dependent receptor, plug domain | 0.58 | 49.0 | 4.12e-01 | 100.0% | 90.1% |
| 4pioA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.57 | 39.0 | 2.82e-01 | 70.0% | 42.5% |
| 6uufA01 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.57 | 42.0 | 3.28e-01 | 83.3% | 62.5% |
| 3nlcA01 | 3.30.70.2700 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 39.0 | 3.66e-01 | 71.7% | 69.7% |
| 1sjyA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.56 | 44.0 | 3.30e-01 | 86.7% | 56.5% |
| 1qwyA01 | 2.40.50.290 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.56 | 38.0 | 3.77e-01 | 83.3% | 66.1% |
| 3soyA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 46.0 | 3.66e-01 | 100.0% | 84.5% |
| 2pw9C02 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.55 | 42.0 | 4.30e-01 | 83.3% | 100.0% |
| 2ppiA01 | 3.30.710.10 | Alpha Beta › 2-Layer Sandwich › Potassium Channel Kv1.1; Chain A › Potassium Channel Kv1.1; Chain A | 0.55 | 37.0 | 3.12e-01 | 80.0% | 39.8% |
| 1v4pC01 | 3.30.980.10 | Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 | 0.54 | 45.0 | 3.82e-01 | 96.7% | 82.4% |
| 8c5yA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 47.0 | 3.43e-01 | 100.0% | 80.0% |
| 3f40A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 45.0 | 3.79e-01 | 100.0% | 84.7% |
| 1t6sB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 35.0 | 3.31e-01 | 71.7% | 66.2% |
| 3aihB01 | 2.70.130.10 | Mainly Beta › Distorted Sandwich › Cation-dependent Mannose-6-phosphate Receptor; Chain A › Mannose-6-phosphate receptor binding domain | 0.51 | 45.0 | 3.75e-01 | 100.0% | 99.1% |
| 3u0jA00 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.51 | 44.0 | 3.00e-01 | 100.0% | 34.1% |
ECOD (56)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4344731 | 221.2.1.2 ↗ | a+b two layers › beta-Grasp › IF3-N › IF3-N › mIF3 | 0.72 | 61.0 | 5.42e-01 | 98.3% | 74.4% |
| 4578080 | 221.2.1.2 ↗ | a+b two layers › beta-Grasp › IF3-N › IF3-N › mIF3 | 0.67 | 57.0 | 5.03e-01 | 98.3% | 73.3% |
| 4932498 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.66 | 48.0 | 3.59e-01 | 80.0% | 55.2% |
| 4937691 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.66 | 49.0 | 3.78e-01 | 80.0% | 56.3% |
| 3737633 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.65 | 43.0 | 4.64e-01 | 95.0% | 82.0% |
| 4972754 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.65 | 45.0 | 3.13e-01 | 73.3% | 25.8% |
| 1495367 | 221.4.1.9 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX_4 | 0.64 | 49.0 | 3.97e-01 | 83.3% | 63.9% |
| 5002856 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.63 | 44.0 | 3.49e-01 | 73.3% | 40.8% |
| 4937959 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.63 | 45.0 | 3.67e-01 | 78.3% | 66.4% |
| 4944753 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 44.0 | 3.90e-01 | 73.3% | 57.6% |
| 4942107 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.63 | 44.0 | 3.48e-01 | 73.3% | 40.8% |
| 4957330 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.62 | 43.0 | 3.24e-01 | 73.3% | 33.8% |
| 5045752 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.61 | 42.0 | 2.98e-01 | 73.3% | 25.1% |
| 5062023 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 43.0 | 3.44e-01 | 73.3% | 42.6% |
| 4950811 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.60 | 42.0 | 3.69e-01 | 73.3% | 54.4% |
| 5058653 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 41.0 | 3.33e-01 | 73.3% | 40.8% |
| 5013170 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.60 | 41.0 | 3.65e-01 | 73.3% | 54.4% |
| 4933166 | 70.1.1.1 ↗ | beta barrels › beta-clip › MoeA C-terminal domain-like › MoeA C-terminal domain-like › MoeA_C | 0.59 | 38.0 | 3.50e-01 | 88.3% | 48.8% |
| 3306957 | 1.1.3.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › DUF7271 | 0.59 | 40.0 | 4.05e-01 | 71.7% | 96.7% |
| 5030835 | 70.1.1.1 ↗ | beta barrels › beta-clip › MoeA C-terminal domain-like › MoeA C-terminal domain-like › MoeA_C | 0.59 | 39.0 | 3.51e-01 | 93.3% | 48.2% |
| 4929623 | 3613.1.1.0 ↗ | beta barrels › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain | 0.58 | 50.0 | 4.74e-01 | 100.0% | 97.3% |
| 4930172 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.58 | 40.0 | 3.31e-01 | 73.3% | 42.6% |
| 3182995 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.58 | 49.0 | 3.93e-01 | 95.0% | 90.8% |
| 3899911 | 239.3.1.1 ↗ | beta barrels › Ribosomal protein L25-like › FAS1 domain › FAS1 domain › Fasciclin | 0.58 | 41.0 | 3.31e-01 | 78.3% | 71.5% |
| 3191209 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.58 | 50.0 | 3.90e-01 | 100.0% | 74.8% |
| 3595407 | 237.1.1.0 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation | 0.58 | 51.0 | 3.44e-01 | 100.0% | 30.0% |
| 4177594 | 221.15.1.0 ↗ | a+b two layers › beta-Grasp › beta-grasp fold domain in leucine-tRNA ligase › beta-grasp fold domain in leucine-tRNA ligase | 0.58 | 42.0 | 4.15e-01 | 80.0% | 92.3% |
| 4927742 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.57 | 48.0 | 4.20e-01 | 100.0% | 93.9% |
| 3168368 | 2.1.1.37 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_NTP_bind | 0.57 | 49.0 | 4.03e-01 | 100.0% | 70.4% |
| 3304181 | 221.15.1.0 ↗ | a+b two layers › beta-Grasp › beta-grasp fold domain in leucine-tRNA ligase › beta-grasp fold domain in leucine-tRNA ligase | 0.56 | 41.0 | 4.02e-01 | 80.0% | 93.8% |
| 1948932 | 243.1.1.18 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 | 0.56 | 47.0 | 4.03e-01 | 100.0% | 90.6% |
| 3743534 | 2.1.1.37 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_NTP_bind | 0.55 | 45.0 | 4.06e-01 | 100.0% | 63.3% |
| 3253090 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.55 | 45.0 | 3.87e-01 | 98.3% | 90.9% |
| 3403636 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.55 | 46.0 | 4.06e-01 | 98.3% | 64.2% |
| 4058844 | 221.15.1.0 ↗ | a+b two layers › beta-Grasp › beta-grasp fold domain in leucine-tRNA ligase › beta-grasp fold domain in leucine-tRNA ligase | 0.55 | 39.0 | 3.89e-01 | 78.3% | 90.8% |
| 3266344 | 59.1.1.3 ↗ | beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like › TFIIF_alpha | 0.55 | 42.0 | 3.47e-01 | 83.3% | 88.2% |
| 3553354 | 2.1.1.87 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RPA43_OB | 0.55 | 49.0 | 4.36e-01 | 100.0% | 82.4% |
| 3467262 | 1.1.11.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain | 0.55 | 45.0 | 3.57e-01 | 98.3% | 49.7% |
| 169506 | 243.1.1.18 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 | 0.54 | 45.0 | 3.78e-01 | 100.0% | 83.9% |
| 5041484 | 2.10.1.1 ↗ | beta barrels › OB-fold › CheW › CheW › CheW | 0.54 | 40.0 | 3.10e-01 | 81.7% | 89.6% |
| 3486585 | 304.47.1.0 ↗ | a+b two layers › Alpha-beta plaits › SEA domain › SEA domain | 0.53 | 39.0 | 3.22e-01 | 81.7% | 93.3% |
| 4927437 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.53 | 47.0 | 4.52e-01 | 100.0% | 92.9% |
| 4077181 | 221.15.1.0 ↗ | a+b two layers › beta-Grasp › beta-grasp fold domain in leucine-tRNA ligase › beta-grasp fold domain in leucine-tRNA ligase | 0.53 | 38.0 | 3.88e-01 | 78.3% | 98.3% |
| 4037465 | 221.15.1.0 ↗ | a+b two layers › beta-Grasp › beta-grasp fold domain in leucine-tRNA ligase › beta-grasp fold domain in leucine-tRNA ligase | 0.53 | 37.0 | 3.73e-01 | 78.3% | 93.7% |
| 1759949 | 221.15.1.0 ↗ | a+b two layers › beta-Grasp › beta-grasp fold domain in leucine-tRNA ligase › beta-grasp fold domain in leucine-tRNA ligase | 0.53 | 40.0 | 3.91e-01 | 83.3% | 91.0% |
| 3585484 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.52 | 45.0 | 3.89e-01 | 100.0% | 68.0% |
| 3256606 | 63.1.1.0 ↗ | beta barrels › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain | 0.52 | 45.0 | 3.49e-01 | 98.3% | 82.1% |
| 4930200 | 2.10.1.1 ↗ | beta barrels › OB-fold › CheW › CheW › CheW | 0.52 | 39.0 | 3.08e-01 | 81.7% | 86.2% |
| 4532362 | 221.15.1.0 ↗ | a+b two layers › beta-Grasp › beta-grasp fold domain in leucine-tRNA ligase › beta-grasp fold domain in leucine-tRNA ligase | 0.51 | 37.0 | 3.67e-01 | 80.0% | 92.3% |
| 3802579 | 3121.1.1.0 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain | 0.51 | 38.0 | 3.56e-01 | 80.0% | 93.3% |
| 3580171 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.51 | 41.0 | 3.70e-01 | 98.3% | 92.6% |
| 3180942 | 2.1.1.194 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Mit_ribos_Mrp51 | 0.51 | 44.0 | 3.35e-01 | 100.0% | 60.0% |
| 3296274 | 3121.1.1.3 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_2 | 0.51 | 38.0 | 3.53e-01 | 80.0% | 93.3% |
| 3570950 | 63.1.1.3 ↗ | beta barrels › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › PRKCSH | 0.51 | 45.0 | 3.18e-01 | 100.0% | 60.5% |
| 3261111 | 63.1.1.0 ↗ | beta barrels › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain | 0.51 | 43.0 | 3.29e-01 | 96.7% | 82.1% |
| 4578194 | 3121.1.1.3 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_2 | 0.50 | 42.0 | 3.81e-01 | 96.7% | 98.8% |