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LSDeep1_scaffold_41_prodigal-single.1__X__X__00141
Bact-VirLSDeep1_scaffold_41_prodigal-single.1__X__X__00141
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-70
Domain cluster:
rep: OR577172.1__WNV50622.1__X__00033__D1-67
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1u8vB03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.79 | 60.0 | 4.15e-01 | 80.0% | 78.4% |
| 2gumA02 | 1.20.5.1890 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.76 | 57.0 | 5.01e-01 | 94.3% | 55.4% |
| 1sumB02 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.70 | 49.0 | 4.11e-01 | 72.9% | 43.2% |
| 3lstA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 42.0 | 4.00e-01 | 75.7% | 96.5% |
| 2x4hA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 40.0 | 3.27e-01 | 71.4% | 55.8% |
| 2r3sB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 38.0 | 3.70e-01 | 75.7% | 100.0% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3552917 | 7022.1.1.1 ↗ | alpha bundles › central core domain of D-alanyl transfer protein › central core domain of D-alanyl transfer protein › central core domain of D-alanyl transfer protein › MBOAT | 0.72 | 53.0 | 3.87e-01 | 90.0% | 30.0% |
| 4078369 | 223.1.1.157 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › sCache_3_3 | 0.68 | 57.0 | 4.11e-01 | 92.9% | 44.5% |
| 4092544 | 102.2.1.4 ↗ | alpha arrays › HhH/H2TH › H2TH › H2TH › H2TH | 0.67 | 35.0 | 3.07e-01 | 75.7% | 35.0% |
| 3272724 | 2002.1.1.111 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HpcH_HpaI | 0.61 | 45.0 | 2.92e-01 | 80.0% | 23.9% |
| 3213629 | 2002.1.1.111 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HpcH_HpaI | 0.60 | 45.0 | 2.97e-01 | 81.4% | 25.0% |
| 3731014 | 2002.1.1.111 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HpcH_HpaI | 0.60 | 44.0 | 2.99e-01 | 81.4% | 27.2% |
| 4465068 | 140.1.1.14 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › tRNA-synt_1e | 0.58 | 43.0 | 3.12e-01 | 81.4% | 63.3% |
| 5017330 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.55 | 36.0 | 2.98e-01 | 84.3% | 38.4% |