LSDeep1_scaffold_41_prodigal-single.1XX__00283

Bact-Vir

LSDeep1_scaffold_41_prodigal-single.1__X__X__00283

Identity

88.5 mean pLDDT

Singleton — not in a non-trivial cluster

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 22-193

PDB

Domain cluster: rep: LacPavin_0818_WC55_scaffold_2946_prodigal-single.1__X__X__00252__D296-491

CATH (5)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2dchX02	3.10.28.10	Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases	0.57	20.0	2.52e-01	99.4%	46.8%
4fpwB00	3.30.530.20	Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain	0.54	29.0	2.99e-01	74.4%	53.4%
3gkeA02	3.90.380.10	Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1	0.54	35.0	3.34e-01	92.4%	52.9%
2xskA00	2.60.40.2420	Mainly Beta › Sandwich › Immunoglobulin-like ›	0.54	25.0	3.12e-01	79.1%	70.5%
4ca1B02	2.60.210.10	Mainly Beta › Sandwich › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A	0.53	30.0	3.33e-01	98.8%	69.7%

ECOD (4)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3614913	4210.1.1.0 ↗	a+b two layers › WGR domain › WGR domain › WGR domain	0.61	26.0	3.59e-01	94.2%	78.8%
3660389	304.109.1.0 ↗	a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e	0.52	22.0	3.35e-01	86.0%	100.0%
3611845	2484.1.1.26 ↗	mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Piwi	0.52	38.0	3.22e-01	75.0%	81.3%
5004168	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.52	27.0	3.24e-01	92.4%	74.5%