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LSDeep1_scaffold_41_prodigal-single.1__X__X__00284
Bact-VirLSDeep1_scaffold_41_prodigal-single.1__X__X__00284
Identity
- Kingdom:
- phage
Quality
83.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-64
Domain cluster:
representative
CATH (79)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2zaiA04 | 2.60.40.3030 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.84 | 74.0 | 5.61e-01 | 95.1% | 68.9% |
| 3zoqC00 | 6.20.250.30 | Special › Other non-globular › Double Stranded RNA Binding Domain › | 0.79 | 59.0 | 6.23e-01 | 88.5% | 92.5% |
| 2ia0B02 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.76 | 67.0 | 5.74e-01 | 100.0% | 96.0% |
| 1qysA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.72 | 56.0 | 4.90e-01 | 85.2% | 57.6% |
| 3popA02 | 3.40.462.20 | Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › | 0.71 | 62.0 | 4.12e-01 | 98.4% | 42.5% |
| 4oj3B00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.71 | 62.0 | 5.40e-01 | 98.4% | 90.5% |
| 2dbbA02 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.71 | 61.0 | 5.41e-01 | 100.0% | 96.8% |
| 3waiA02 | 2.60.40.3390 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.70 | 58.0 | 5.01e-01 | 90.2% | 61.3% |
| 6julA02 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.70 | 55.0 | 4.82e-01 | 88.5% | 63.5% |
| 1unnC00 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.70 | 58.0 | 4.83e-01 | 95.1% | 90.1% |
| 2efpA02 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.69 | 61.0 | 5.22e-01 | 100.0% | 91.8% |
| 1b04A02 | 3.30.1490.70 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.69 | 54.0 | 4.61e-01 | 90.2% | 52.5% |
| 1j5yA02 | 3.30.1340.20 | Alpha Beta › 2-Layer Sandwich › Histidine-containing Protein; Chain: A; › 3H domain | 0.69 | 50.0 | 4.14e-01 | 77.0% | 99.1% |
| 3h20A01 | 3.30.1490.240 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RepB DNA-primase, N-terminal domain | 0.69 | 51.0 | 5.04e-01 | 90.2% | 74.2% |
| 3mfiA04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.68 | 53.0 | 4.38e-01 | 88.5% | 58.0% |
| 2jvfA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.68 | 54.0 | 4.72e-01 | 88.5% | 58.5% |
| 1dgsA02 | 3.30.1490.70 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.68 | 53.0 | 4.58e-01 | 90.2% | 54.7% |
| 2lqjA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.68 | 54.0 | 4.74e-01 | 90.2% | 93.6% |
| 2ebfX01 | 3.10.670.10 | Alpha Beta › Roll › Secreted effector protein ssei fold › Secreted effector protein ssei. | 0.67 | 60.0 | 4.20e-01 | 100.0% | 49.2% |
| 1mwqA00 | 3.30.70.1060 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel | 0.67 | 55.0 | 4.77e-01 | 95.1% | 99.0% |
| 4u7cB04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.67 | 56.0 | 4.64e-01 | 93.4% | 94.5% |
| 3trgA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.67 | 57.0 | 4.99e-01 | 98.4% | 92.6% |
| 1vwxS02 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.66 | 54.0 | 5.11e-01 | 96.7% | 82.9% |
| 3vtiA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 55.0 | 4.83e-01 | 96.7% | 87.5% |
| 7r3eB02 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.65 | 46.0 | 3.41e-01 | 73.8% | 30.1% |
| 6rptC00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.65 | 52.0 | 4.27e-01 | 88.5% | 48.2% |
| 3hvnA01 | 3.90.840.10 | Alpha Beta › Alpha-Beta Complex › HIV-1 Reverse Transcriptase; Chain A, domain 3 › Thiol-activated cytolysin superfamily/Thiol-activated cytolysin, alpha-beta domain | 0.65 | 51.0 | 3.80e-01 | 90.2% | 39.0% |
| 2nytD00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.65 | 55.0 | 4.04e-01 | 100.0% | 80.4% |
| 2bvfA03 | 3.40.462.20 | Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › | 0.65 | 54.0 | 3.83e-01 | 98.4% | 43.8% |
| 4hscX04 | 2.60.40.1430 | Mainly Beta › Sandwich › Immunoglobulin-like › Perfringolysin, domain 4 | 0.64 | 51.0 | 4.26e-01 | 88.5% | 59.1% |
| 1jx4A04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.64 | 53.0 | 4.60e-01 | 95.1% | 63.3% |
| 5hdwA00 | 2.60.40.1470 | Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain | 0.64 | 52.0 | 4.01e-01 | 88.5% | 49.6% |
| 2w5fB01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.64 | 52.0 | 3.93e-01 | 91.8% | 38.2% |
| 6z9cA01 | 2.60.40.1470 | Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain | 0.64 | 52.0 | 4.11e-01 | 88.5% | 52.5% |
| 1xvsA00 | 2.60.40.1470 | Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain | 0.64 | 50.0 | 4.01e-01 | 86.9% | 52.0% |
| 2v3sA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.64 | 49.0 | 4.31e-01 | 86.9% | 100.0% |
| 1ukfA00 | 3.90.70.20 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.63 | 52.0 | 3.74e-01 | 93.4% | 54.8% |
| 1s3rA04 | 2.60.40.1430 | Mainly Beta › Sandwich › Immunoglobulin-like › Perfringolysin, domain 4 | 0.63 | 52.0 | 4.25e-01 | 90.2% | 59.5% |
| 2f4nB02 | 2.40.30.90 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacterial fluorinating enzyme like | 0.63 | 47.0 | 4.03e-01 | 78.7% | 71.3% |
| 5mj6A03 | 2.60.40.1910 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.63 | 47.0 | 4.32e-01 | 86.9% | 61.3% |
| 1vwxS01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.63 | 50.0 | 4.80e-01 | 88.5% | 91.5% |
| 1dyoA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.63 | 51.0 | 3.82e-01 | 90.2% | 57.1% |
| 5gv0A00 | 2.40.160.110 | Mainly Beta › Beta Barrel › Porin › | 0.63 | 51.0 | 3.83e-01 | 91.8% | 85.8% |
| 1nc7A00 | 2.60.290.11 | Mainly Beta › Sandwich › Hypothetical Protein Tm1070; Chain: A › TM1070-like | 0.63 | 50.0 | 4.13e-01 | 90.2% | 72.4% |
| 2f1eA00 | 2.60.40.1470 | Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain | 0.62 | 50.0 | 4.03e-01 | 86.9% | 50.9% |
| 2jvuA00 | 2.60.40.2290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.62 | 51.0 | 4.37e-01 | 91.8% | 57.1% |
| 5l10B00 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.62 | 43.0 | 3.14e-01 | 72.1% | 31.2% |
| 5cvmA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.61 | 50.0 | 3.21e-01 | 91.8% | 27.6% |
| 2zewB00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.61 | 46.0 | 3.53e-01 | 83.6% | 60.5% |
| 2irmA00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.61 | 52.0 | 3.26e-01 | 96.7% | 74.9% |
| 5z6pA01 | 2.60.120.430 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin | 0.60 | 50.0 | 3.69e-01 | 96.7% | 68.5% |
| 2avxA00 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.60 | 42.0 | 3.10e-01 | 73.8% | 29.8% |
| 2wliA02 | 2.60.40.1400 | Mainly Beta › Sandwich › Immunoglobulin-like › G protein-activated inward rectifier potassium channel 1 | 0.60 | 50.0 | 3.74e-01 | 95.1% | 46.6% |
| 2jxtA01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.59 | 48.0 | 4.60e-01 | 98.4% | 84.2% |
| 2bw2A01 | 3.10.20.420 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Bypass-of-forespore C, N-terminal domain | 0.59 | 42.0 | 4.36e-01 | 88.5% | 87.3% |
| 4ic5A02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.59 | 45.0 | 3.80e-01 | 83.6% | 57.7% |
| 4avaA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.58 | 42.0 | 3.22e-01 | 85.2% | 32.6% |
| 4dyoA02 | 2.30.250.10 | Mainly Beta › Roll › Aminopeptidase i, Domain 2 › Aminopeptidase i, Domain 2 | 0.58 | 45.0 | 3.57e-01 | 88.5% | 72.7% |
| 3e0jB00 | 3.90.1030.20 | Alpha Beta › Alpha-Beta Complex › 50s Ribosomal Protein L17; Chain: A, › DNA polymerase delta, p66 (Cdc27) subunit, wHTH domain | 0.58 | 50.0 | 3.87e-01 | 100.0% | 65.7% |
| 3wqbA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.58 | 46.0 | 3.47e-01 | 91.8% | 96.4% |
| 1ywlA00 | 3.40.1440.10 | Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.57 | 47.0 | 4.18e-01 | 96.7% | 66.7% |
| 6phxA01 | 2.70.98.60 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis | 0.57 | 43.0 | 2.83e-01 | 91.8% | 17.1% |
| 3rb5A02 | 2.60.40.2030 | Mainly Beta › Sandwich › Immunoglobulin-like › CalX-beta domain | 0.56 | 43.0 | 3.53e-01 | 93.4% | 42.4% |
| 4ca1B02 | 2.60.210.10 | Mainly Beta › Sandwich › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 0.56 | 46.0 | 3.62e-01 | 91.8% | 47.7% |
| 2f5tX02 | 2.30.30.690 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 44.0 | 3.94e-01 | 86.9% | 76.7% |
| 2fhqA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.56 | 44.0 | 3.54e-01 | 90.2% | 43.7% |
| 2vpaA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.56 | 47.0 | 3.37e-01 | 100.0% | 40.2% |
| 3ihpA03 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.56 | 45.0 | 2.88e-01 | 91.8% | 33.4% |
| 3dnhA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.55 | 45.0 | 3.52e-01 | 96.7% | 41.7% |
| 2ijzA02 | 2.30.250.10 | Mainly Beta › Roll › Aminopeptidase i, Domain 2 › Aminopeptidase i, Domain 2 | 0.55 | 43.0 | 3.67e-01 | 88.5% | 69.2% |
| 1lb6A00 | 2.60.210.10 | Mainly Beta › Sandwich › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 0.55 | 42.0 | 3.32e-01 | 90.2% | 48.4% |
| 3tcaA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.55 | 39.0 | 3.55e-01 | 96.7% | 53.3% |
| 3egrA00 | 3.10.20.520 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phenylacetic acid degradation B | 0.54 | 40.0 | 4.06e-01 | 86.9% | 84.1% |
| 3h96C00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.54 | 42.0 | 3.37e-01 | 91.8% | 55.1% |
| 4wiwA02 | 3.10.50.10 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.53 | 37.0 | 3.67e-01 | 77.0% | 100.0% |
| 5chtB00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.53 | 42.0 | 2.76e-01 | 90.2% | 90.7% |
| 3vteA03 | 3.40.462.20 | Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › | 0.52 | 43.0 | 3.07e-01 | 91.8% | 54.6% |
| 7ylrA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.51 | 39.0 | 3.45e-01 | 91.8% | 70.5% |
| 7pwfD02 | 3.30.1140.32 | Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › Ribosomal protein S3, C-terminal domain | 0.50 | 40.0 | 3.54e-01 | 86.9% | 65.2% |
ECOD (91)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3285401 | 3986.2.1.0 ↗ | a+b two layers › GTP-binding protein lepA C-terminal domain-like › Antitoxin Dmd › Antitoxin Dmd | 0.82 | 65.0 | 6.07e-01 | 90.2% | 69.3% |
| 3287357 | 3115.3.1.0 ↗ | a+b two layers › GP2-like › P56 › P56 | 0.81 | 65.0 | 6.65e-01 | 86.9% | 100.0% |
| 146929 | 3115.3.1.1 ↗ | a+b two layers › GP2-like › P56 › P56 › UDG-inhib_P56 | 0.81 | 63.0 | 6.53e-01 | 91.8% | 91.1% |
| 4981720 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.79 | 46.0 | 3.51e-01 | 93.4% | 26.7% |
| 3330442 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.79 | 65.0 | 5.82e-01 | 90.2% | 97.6% |
| 4175430 | 1119.1.1.1 ↗ | a+b complex topology › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › BioW | 0.78 | 68.0 | 4.50e-01 | 98.4% | 98.8% |
| 4057352 | 1119.1.1.1 ↗ | a+b complex topology › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › BioW | 0.75 | 65.0 | 4.29e-01 | 98.4% | 97.3% |
| 3508990 | 3115.3.1.2 ↗ | a+b two layers › GP2-like › P56 › P56 › DUF2922 | 0.74 | 58.0 | 5.71e-01 | 85.2% | 100.0% |
| 4654177 | 1119.1.1.1 ↗ | a+b complex topology › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › BioW | 0.73 | 63.0 | 4.18e-01 | 96.7% | 97.6% |
| 3216210 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.73 | 55.0 | 5.85e-01 | 83.6% | 100.0% |
| 3738959 | 11.1.1.643 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig-like_POM152 | 0.73 | 52.0 | 4.55e-01 | 90.2% | 49.5% |
| 4206728 | 304.110.1.1 ↗ | a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like › Acylphosphatase | 0.73 | 62.0 | 5.39e-01 | 95.1% | 91.4% |
| 5043357 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.73 | 57.0 | 4.75e-01 | 88.5% | 49.5% |
| 3952578 | 304.6.1.3 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › BBE | 0.72 | 64.0 | 4.28e-01 | 100.0% | 38.5% |
| 3615237 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.72 | 60.0 | 3.67e-01 | 91.8% | 50.3% |
| 3903752 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.72 | 57.0 | 4.71e-01 | 90.2% | 49.5% |
| 4041707 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.72 | 63.0 | 5.38e-01 | 100.0% | 93.0% |
| 5042583 | 10.3.1.0 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like | 0.71 | 60.0 | 5.14e-01 | 91.8% | 66.3% |
| 3969006 | 3115.6.1.2 ↗ | a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › PF28597 | 0.71 | 50.0 | 5.47e-01 | 82.0% | 100.0% |
| 4647537 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.71 | 60.0 | 4.96e-01 | 95.1% | 88.2% |
| 4032618 | 3115.2.1.0 ↗ | a+b two layers › GP2-like › GP2 › GP2 | 0.71 | 55.0 | 5.72e-01 | 86.9% | 92.7% |
| 5053865 | 821.1.1.0 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.70 | 59.0 | 5.25e-01 | 96.7% | 76.7% |
| 4984422 | 304.110.1.1 ↗ | a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like › Acylphosphatase | 0.70 | 58.0 | 4.73e-01 | 93.4% | 73.0% |
| 3975705 | 3115.6.1.0 ↗ | a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon | 0.69 | 50.0 | 5.29e-01 | 86.9% | 94.0% |
| 3235704 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.69 | 58.0 | 5.22e-01 | 93.4% | 90.5% |
| 3830721 | 207.1.1.43 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_3 | 0.69 | 59.0 | 3.47e-01 | 96.7% | 15.2% |
| 3929391 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.69 | 56.0 | 4.70e-01 | 93.4% | 93.6% |
| 3588755 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 57.0 | 5.34e-01 | 91.8% | 100.0% |
| 2106285 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.68 | 56.0 | 4.76e-01 | 96.7% | 58.3% |
| 5048398 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.68 | 49.0 | 4.10e-01 | 88.5% | 44.8% |
| 3994984 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.68 | 55.0 | 5.43e-01 | 90.2% | 95.4% |
| 5012895 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.67 | 53.0 | 5.54e-01 | 88.5% | 100.0% |
| 4985246 | 11.14.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domains in STT3 › Ig-like domains in STT3 › AglB_L1 | 0.67 | 55.0 | 4.80e-01 | 90.2% | 66.7% |
| 4648475 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.67 | 51.0 | 5.19e-01 | 85.2% | 100.0% |
| 2999708 | 223.1.1.7 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › Autoind_bind | 0.67 | 46.0 | 3.33e-01 | 72.1% | 27.3% |
| 3474250 | 3369.1.1.0 ↗ | beta meanders › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 | 0.66 | 54.0 | 3.87e-01 | 91.8% | 80.0% |
| 4155354 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.66 | 56.0 | 4.51e-01 | 95.1% | 83.3% |
| 2512518 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.66 | 54.0 | 4.74e-01 | 96.7% | 62.4% |
| 5027230 | 10.7.1.0 ↗ | beta sandwiches › jelly-roll › Hypothetical protein TM1070 › Hypothetical protein TM1070 | 0.66 | 49.0 | 4.41e-01 | 86.9% | 57.6% |
| 4013514 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.66 | 54.0 | 4.66e-01 | 96.7% | 60.0% |
| 4990637 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.66 | 54.0 | 5.01e-01 | 96.7% | 77.1% |
| 4043865 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.66 | 54.0 | 4.88e-01 | 93.4% | 98.8% |
| 4033537 | 1119.1.1.1 ↗ | a+b complex topology › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › BioW | 0.66 | 53.0 | 3.69e-01 | 95.1% | 97.0% |
| 4007508 | 3115.6.1.2 ↗ | a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › PF28597 | 0.66 | 49.0 | 5.19e-01 | 91.8% | 100.0% |
| 3942988 | 4187.2.1.1 ↗ | a+b two layers › NosL/MerB-like › DUF2233 › DUF2233 › NAGPA | 0.65 | 46.0 | 4.53e-01 | 82.0% | 70.8% |
| 2527501 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.65 | 53.0 | 4.59e-01 | 96.7% | 60.6% |
| 5065436 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.65 | 53.0 | 5.26e-01 | 93.4% | 95.3% |
| 4463006 | 3115.2.1.0 ↗ | a+b two layers › GP2-like › GP2 › GP2 | 0.65 | 46.0 | 5.04e-01 | 78.7% | 100.0% |
| 3892842 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.65 | 52.0 | 5.17e-01 | 93.4% | 98.5% |
| 3231372 | 11.10.1.6 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH | 0.64 | 51.0 | 4.05e-01 | 88.5% | 46.9% |
| 3339155 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.64 | 54.0 | 3.97e-01 | 96.7% | 46.3% |
| 5074648 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.64 | 52.0 | 4.98e-01 | 96.7% | 84.0% |
| 3861601 | 3369.1.1.1 ↗ | beta meanders › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 › Lamp2-like_luminal | 0.64 | 52.0 | 3.83e-01 | 90.2% | 76.1% |
| 4541620 | 210.1.3.5 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 | 0.64 | 53.0 | 3.61e-01 | 98.4% | 40.8% |
| 3859590 | 386.1.1.248 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_ZNF592 | 0.64 | 47.0 | 5.09e-01 | 88.5% | 98.0% |
| 4967222 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.64 | 50.0 | 5.03e-01 | 90.2% | 98.3% |
| 5067865 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.64 | 52.0 | 5.04e-01 | 96.7% | 90.0% |
| 3594101 | 301.1.1.0 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like | 0.63 | 54.0 | 4.07e-01 | 98.4% | 60.6% |
| 4969863 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.63 | 51.0 | 4.92e-01 | 98.4% | 85.3% |
| 3622256 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.63 | 51.0 | 3.82e-01 | 90.2% | 40.0% |
| 4939739 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.63 | 48.0 | 4.89e-01 | 88.5% | 98.3% |
| 4983090 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.63 | 50.0 | 4.76e-01 | 96.7% | 79.7% |
| 3638202 | 304.6.1.0 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain | 0.63 | 54.0 | 3.67e-01 | 98.4% | 40.0% |
| 3411474 | 3115.1.1.3 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › NRF | 0.62 | 50.0 | 3.82e-01 | 93.4% | 50.6% |
| 4160542 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.62 | 48.0 | 4.95e-01 | 90.2% | 98.3% |
| 4951473 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.62 | 48.0 | 4.81e-01 | 90.2% | 93.7% |
| 184690 | 11.22.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Dispersin › Dispersin › CellEnv_BiogenAssoc | 0.62 | 51.0 | 4.37e-01 | 91.8% | 57.1% |
| 3185811 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 53.0 | 4.41e-01 | 100.0% | 63.5% |
| 3929121 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 54.0 | 4.44e-01 | 100.0% | 85.2% |
| 3511438 | 382.1.1.13 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › Ly-6_related | 0.61 | 51.0 | 4.12e-01 | 91.8% | 99.1% |
| 3413058 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.61 | 50.0 | 4.42e-01 | 91.8% | 93.3% |
| 5011866 | 210.1.3.3 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 | 0.61 | 49.0 | 3.43e-01 | 96.7% | 26.8% |
| 3938430 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.60 | 49.0 | 3.62e-01 | 93.4% | 42.3% |
| 3255162 | 3662.1.1.1 ↗ | a+b two layers › Proteasome assembling chaperone 3 (PAC3)-related › Proteasome assembling chaperone 3 (PAC3)-related › Proteasome assembling chaperone 3 (PAC3)-related › PAC3 | 0.60 | 42.0 | 3.44e-01 | 73.8% | 45.2% |
| 3999432 | 11.2.1.52 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2_nem | 0.60 | 51.0 | 3.75e-01 | 100.0% | 36.6% |
| 4951717 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.59 | 46.0 | 4.41e-01 | 88.5% | 98.7% |
| 2006900 | 302.4.1.0 ↗ | a+b two layers › Reverse ferredoxin › a+b domain in Acetophenone carboxylase (Apc) alpha subunit › a+b domain in Acetophenone carboxylase (Apc) alpha subunit | 0.59 | 49.0 | 4.25e-01 | 98.4% | 99.0% |
| 5039888 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.59 | 45.0 | 3.64e-01 | 85.2% | 41.6% |
| 3248103 | 11.1.1.1040 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF28849 | 0.59 | 50.0 | 4.11e-01 | 98.4% | 86.7% |
| 3617619 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.59 | 47.0 | 3.66e-01 | 88.5% | 41.5% |
| 3221414 | 11.10.1.6 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH | 0.59 | 48.0 | 3.04e-01 | 93.4% | 35.5% |
| 3232413 | 511.1.1.0 ↗ | beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain | 0.59 | 45.0 | 3.32e-01 | 93.4% | 29.4% |
| 223776 | 3115.4.1.1 ↗ | a+b two layers › GP2-like › Uncharacterized conserved protein Il1583 › Uncharacterized conserved protein Il1583 › DUF1543 | 0.58 | 46.0 | 4.50e-01 | 95.1% | 83.1% |
| 4606765 | 1.1.7.91 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25940 | 0.58 | 47.0 | 3.86e-01 | 88.5% | 60.0% |
| 3680066 | 10.10.1.5 ↗ | beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) › DUF7755 | 0.58 | 47.0 | 3.66e-01 | 96.7% | 71.6% |
| 3620107 | 10.32.1.203 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin | 0.58 | 46.0 | 3.66e-01 | 93.4% | 67.9% |
| 3264847 | 2492.1.1.36 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › ODR4-like | 0.57 | 43.0 | 3.12e-01 | 86.9% | 93.7% |
| 3403394 | 3369.1.1.1 ↗ | beta meanders › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 › Lamp2-like_luminal | 0.56 | 45.0 | 3.38e-01 | 93.4% | 87.6% |
| 4298891 | 4121.1.1.2 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › MRS2-like | 0.56 | 44.0 | 2.90e-01 | 88.5% | 30.7% |
| 3941016 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.54 | 45.0 | 3.61e-01 | 98.4% | 47.4% |
| 3784847 | 11.1.1.378 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Rgp1 | 0.53 | 45.0 | 3.37e-01 | 100.0% | 51.8% |