←Back to structures
LSDeep1_scaffold_41_prodigal-single.1__X__X__00447
Bact-VirLSDeep1_scaffold_41_prodigal-single.1__X__X__00447
Identity
- Kingdom:
- phage
Quality
64.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 68-119
Domain cluster:
rep: ON687735.1__UVD40938.1__X__00081__D9-60
CATH (50)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1xa6A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.75 | 52.0 | 4.14e-01 | 100.0% | 36.5% |
| 3k59A07 | 1.10.132.60 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › B family DNA polymerase, thumb domain | 0.74 | 35.0 | 2.49e-01 | 78.8% | 15.5% |
| 2x5cA01 | 3.30.70.3590 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.70 | 48.0 | 3.91e-01 | 92.3% | 40.7% |
| 1gccA00 | 3.30.730.10 | Alpha Beta › 2-Layer Sandwich › GCC-box Binding Domain › AP2/ERF domain | 0.67 | 59.0 | 5.56e-01 | 100.0% | 81.0% |
| 3sqiA02 | 1.10.443.20 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Centromere DNA-binding protein complex CBF3 subunit, domain 2 | 0.66 | 45.0 | 2.79e-01 | 100.0% | 12.8% |
| 1gqyB02 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.64 | 53.0 | 3.59e-01 | 100.0% | 23.5% |
| 2wtzA02 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.63 | 52.0 | 3.49e-01 | 100.0% | 22.2% |
| 6cngA03 | 3.30.1180.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › | 0.62 | 51.0 | 3.99e-01 | 98.1% | 96.9% |
| 3sreA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.62 | 48.0 | 2.97e-01 | 86.5% | 24.6% |
| 3fdjA03 | 3.30.1180.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › | 0.62 | 51.0 | 3.96e-01 | 98.1% | 51.6% |
| 1ri6A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.61 | 48.0 | 2.99e-01 | 88.5% | 20.4% |
| 1txdA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.60 | 49.0 | 3.72e-01 | 100.0% | 38.8% |
| 1kcfB00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.60 | 49.0 | 3.32e-01 | 100.0% | 83.3% |
| 3a9gA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.59 | 48.0 | 3.01e-01 | 96.2% | 26.0% |
| 3qwmA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.58 | 50.0 | 3.81e-01 | 98.1% | 40.9% |
| 3qf7A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 44.0 | 2.78e-01 | 84.6% | 15.6% |
| 2k18A02 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.58 | 46.0 | 3.68e-01 | 96.2% | 78.0% |
| 2fggA01 | 3.30.160.240 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Rv1738 | 0.57 | 50.0 | 4.45e-01 | 100.0% | 73.3% |
| 4pz7A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 48.0 | 3.63e-01 | 100.0% | 70.1% |
| 1m61A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.56 | 45.0 | 3.75e-01 | 96.2% | 62.5% |
| 3qdfA01 | 2.30.30.370 | Mainly Beta › Roll › SH3 type barrels. › FAH | 0.55 | 38.0 | 3.76e-01 | 73.1% | 72.4% |
| 6eugA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.55 | 44.0 | 2.77e-01 | 98.1% | 25.4% |
| 2jzlA00 | 2.30.60.10 | Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N | 0.55 | 44.0 | 3.64e-01 | 100.0% | 93.7% |
| 3mkcA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.54 | 43.0 | 3.35e-01 | 98.1% | 50.0% |
| 2pm6D01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.54 | 43.0 | 2.81e-01 | 96.2% | 23.6% |
| 1p16B02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 44.0 | 3.42e-01 | 98.1% | 73.7% |
| 7mdhA02 | 3.90.110.10 | Alpha Beta › Alpha-Beta Complex › L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2 › Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal | 0.54 | 43.0 | 3.13e-01 | 96.2% | 83.2% |
| 2nutB04 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.54 | 44.0 | 2.97e-01 | 100.0% | 36.0% |
| 2eyqA05 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.54 | 39.0 | 3.82e-01 | 100.0% | 72.9% |
| 1icwB00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.54 | 43.0 | 3.98e-01 | 88.5% | 97.0% |
| 2oq1A03 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.54 | 42.0 | 3.60e-01 | 96.2% | 64.0% |
| 3f4lA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.53 | 42.0 | 2.84e-01 | 92.3% | 95.5% |
| 2cs0A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.53 | 42.0 | 3.65e-01 | 96.2% | 69.5% |
| 1vq8A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 35.0 | 3.17e-01 | 82.7% | 47.4% |
| 3a0oA03 | 2.70.98.70 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.52 | 40.0 | 2.68e-01 | 96.2% | 89.3% |
| 2ablA02 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.52 | 40.0 | 3.51e-01 | 96.2% | 67.0% |
| 4jocA00 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.52 | 38.0 | 2.34e-01 | 80.8% | 15.2% |
| 2wmlA00 | 3.90.1480.20 | Alpha Beta › Alpha-Beta Complex › sialyltransferase cstii, chain A › Glycosyl transferase family 29 | 0.52 | 42.0 | 2.70e-01 | 92.3% | 34.8% |
| 2h3gX02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.52 | 39.0 | 3.01e-01 | 96.2% | 51.6% |
| 2zwrB00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.52 | 36.0 | 2.52e-01 | 76.9% | 90.8% |
| 1a1aB00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.52 | 42.0 | 3.38e-01 | 90.4% | 68.6% |
| 4pq0A02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 36.0 | 3.14e-01 | 90.4% | 44.1% |
| 3uoxB01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.51 | 41.0 | 2.62e-01 | 88.5% | 35.9% |
| 2mp1A00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.51 | 41.0 | 3.67e-01 | 88.5% | 81.8% |
| 4e80C01 | 1.10.1410.10 | Mainly Alpha › Orthogonal Bundle › Poly(a)-polymerase, middle domain › | 0.51 | 45.0 | 2.99e-01 | 100.0% | 38.1% |
| 1ospO02 | 3.90.930.1 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › | 0.51 | 36.0 | 2.77e-01 | 82.7% | 28.8% |
| 1w1wA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 46.0 | 2.84e-01 | 100.0% | 29.2% |
| 1s3aA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.51 | 43.0 | 3.73e-01 | 100.0% | 100.0% |
| 4z32C02 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.50 | 43.0 | 3.55e-01 | 100.0% | 54.5% |
| 2fhdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.50 | 35.0 | 3.40e-01 | 76.9% | 87.1% |
ECOD (66)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3616729 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.72 | 62.0 | 4.97e-01 | 100.0% | 49.0% |
| 3947082 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.71 | 60.0 | 4.98e-01 | 94.2% | 66.7% |
| 3596303 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.68 | 59.0 | 5.29e-01 | 100.0% | 70.7% |
| 3272286 | 220.1.1.174 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Cybc1_Eros | 0.67 | 56.0 | 4.47e-01 | 96.2% | 45.5% |
| 3523526 | 220.1.1.174 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Cybc1_Eros | 0.67 | 54.0 | 4.33e-01 | 92.3% | 48.2% |
| 3861438 | 220.1.1.174 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Cybc1_Eros | 0.66 | 55.0 | 4.28e-01 | 96.2% | 44.2% |
| 4189267 | 3604.1.1.0 ↗ | a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain | 0.66 | 40.0 | 3.81e-01 | 92.3% | 53.3% |
| 4432847 | 2004.1.1.159 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M | 0.66 | 56.0 | 3.68e-01 | 100.0% | 24.7% |
| 4945379 | 301.13.1.0 ↗ | a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain | 0.64 | 54.0 | 4.19e-01 | 100.0% | 54.4% |
| 3504023 | 883.1.1.2 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP_C | 0.63 | 40.0 | 2.60e-01 | 100.0% | 13.6% |
| 4945290 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.62 | 49.0 | 4.85e-01 | 100.0% | 91.7% |
| 4257154 | 220.1.1.126 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Ycf4 | 0.61 | 49.0 | 3.94e-01 | 90.4% | 44.4% |
| 4051690 | 220.1.1.126 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Ycf4 | 0.61 | 51.0 | 4.16e-01 | 96.2% | 48.6% |
| 4609498 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.61 | 52.0 | 4.58e-01 | 100.0% | 67.5% |
| 4484723 | 220.1.1.126 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Ycf4 | 0.61 | 51.0 | 4.18e-01 | 96.2% | 49.0% |
| 4025365 | 220.1.1.74 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PIG-H | 0.60 | 48.0 | 3.91e-01 | 92.3% | 46.4% |
| 3518510 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.60 | 52.0 | 4.20e-01 | 100.0% | 55.2% |
| 4394739 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.60 | 51.0 | 4.68e-01 | 98.1% | 74.3% |
| 4461189 | 301.13.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain › DegV | 0.60 | 52.0 | 4.00e-01 | 100.0% | 100.0% |
| 3321360 | 4210.1.1.1 ↗ | a+b two layers › WGR domain › WGR domain › WGR domain › WGR | 0.60 | 53.0 | 4.67e-01 | 98.1% | 86.7% |
| 4121107 | 5.1.4.24 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › SBP56 | 0.60 | 48.0 | 2.92e-01 | 98.1% | 94.5% |
| 4329368 | 301.13.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain › DegV | 0.59 | 50.0 | 3.93e-01 | 100.0% | 54.4% |
| 3979705 | 2484.1.1.248 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › GpA_nuclease | 0.59 | 49.0 | 3.21e-01 | 100.0% | 30.4% |
| 3773112 | 5.1.4.94 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Det1 | 0.59 | 47.0 | 2.92e-01 | 96.2% | 25.9% |
| 1714462 | 1021.1.1.0 ↗ | a+b two layers › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases | 0.59 | 41.0 | 3.50e-01 | 98.1% | 43.8% |
| 3931558 | 207.1.1.156 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › PF27094 | 0.59 | 48.0 | 2.82e-01 | 100.0% | 16.0% |
| 4312097 | 295.1.1.15 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › UPF0128 | 0.58 | 41.0 | 2.97e-01 | 78.8% | 74.3% |
| 4144852 | 220.1.1.126 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Ycf4 | 0.58 | 47.0 | 3.90e-01 | 98.1% | 49.1% |
| 4155224 | 9.16.1.4 ↗ | beta barrels › Lipocalins/Streptavidin › Hypothetical protein Atu4866 › Hypothetical protein Atu4866 › Rot1 | 0.57 | 43.0 | 3.13e-01 | 84.6% | 72.5% |
| 3239000 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.57 | 39.0 | 3.00e-01 | 73.1% | 94.6% |
| 5073213 | 2484.1.1.302 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB | 0.57 | 50.0 | 3.32e-01 | 100.0% | 89.5% |
| 3469923 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.57 | 47.0 | 3.87e-01 | 100.0% | 50.5% |
| 3341257 | 2485.1.1.55 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › FAF1 | 0.57 | 46.0 | 3.40e-01 | 98.1% | 62.4% |
| 3609520 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.57 | 40.0 | 3.41e-01 | 78.8% | 75.8% |
| 2807015 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.56 | 44.0 | 3.63e-01 | 96.2% | 57.0% |
| 4231809 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.56 | 49.0 | 2.86e-01 | 100.0% | 54.7% |
| 3295705 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.55 | 45.0 | 3.36e-01 | 90.4% | 48.1% |
| 4034031 | 4056.1.1.0 ↗ | beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein | 0.55 | 36.0 | 3.42e-01 | 78.8% | 53.8% |
| 3506540 | 220.1.1.20 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_TFIIH | 0.55 | 48.0 | 3.76e-01 | 100.0% | 49.6% |
| 3715091 | 64.1.1.0 ↗ | beta meanders › WW domain-like › WW domain › WW domain | 0.55 | 35.0 | 3.29e-01 | 86.5% | 50.8% |
| 5024208 | 2484.1.1.23 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Hydantoinase_A | 0.54 | 39.0 | 3.07e-01 | 82.7% | 41.5% |
| 3843531 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.54 | 42.0 | 3.62e-01 | 96.2% | 60.0% |
| 3404845 | 220.1.1.22 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C | 0.54 | 44.0 | 3.61e-01 | 90.4% | 91.6% |
| 4401930 | 2.1.1.31 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_ligase_A_C | 0.54 | 43.0 | 3.44e-01 | 100.0% | 81.4% |
| 4280539 | 109.21.1.8 ↗ | alpha superhelices › Repetitive alpha hairpins › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › WD40 | 0.54 | 44.0 | 2.48e-01 | 100.0% | 13.1% |
| 4014812 | 4.8.1.2 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow | 0.53 | 36.0 | 3.48e-01 | 90.4% | 61.7% |
| 3170899 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.53 | 45.0 | 3.61e-01 | 96.2% | 72.4% |
| 3764537 | 1170.1.1.1 ↗ | beta barrels › IL8-related › IL8-related › IL8 › IL8 | 0.53 | 42.0 | 3.67e-01 | 88.5% | 78.8% |
| 3392668 | 252.2.1.0 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like | 0.53 | 41.0 | 3.96e-01 | 100.0% | 75.4% |
| 2464208 | 220.3.1.2 ↗ | beta barrels › PH domain-like › first barrel domain in viral glycoproteins › first barrel domain in viral glycoproteins › Baculo_gp64 | 0.53 | 41.0 | 2.89e-01 | 94.2% | 27.5% |
| 3833570 | 298.1.1.24 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 | 0.53 | 44.0 | 2.88e-01 | 96.2% | 84.6% |
| 5011439 | 802.1.1.0 ↗ | a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 | 0.52 | 41.0 | 3.19e-01 | 96.2% | 89.7% |
| 4339993 | 4.1.1.32 ↗ | beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID | 0.52 | 38.0 | 3.28e-01 | 98.1% | 46.7% |
| 3675823 | 11.1.1.897 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Beta-sand_DEX1 | 0.52 | 36.0 | 2.70e-01 | 75.0% | 24.4% |
| 3912274 | 1170.1.1.1 ↗ | beta barrels › IL8-related › IL8-related › IL8 › IL8 | 0.52 | 41.0 | 3.79e-01 | 88.5% | 90.0% |
| 3705541 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.52 | 40.0 | 3.29e-01 | 84.6% | 95.0% |
| 4966375 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.52 | 46.0 | 2.66e-01 | 100.0% | 56.8% |
| 3510741 | 2003.1.5.156 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › tRNA_U5-meth_tr, Methyltransf_31 | 0.52 | 42.0 | 2.61e-01 | 100.0% | 40.8% |
| 4116977 | 7541.1.1.1 ↗ | a/b three-layered sandwiches › Molybdenum cofactor biosynthesis proteins › Molybdenum cofactor biosynthesis proteins › Molybdenum cofactor biosynthesis proteins › MoCF_biosynth | 0.52 | 39.0 | 2.84e-01 | 88.5% | 92.2% |
| 4179677 | 2003.1.5.53 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › tRNA_U5-meth_tr | 0.52 | 43.0 | 2.72e-01 | 100.0% | 80.8% |
| 4985494 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.52 | 46.0 | 2.65e-01 | 100.0% | 53.9% |
| 3918073 | 1170.1.1.1 ↗ | beta barrels › IL8-related › IL8-related › IL8 › IL8 | 0.51 | 41.0 | 3.73e-01 | 88.5% | 91.4% |
| 4993051 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.51 | 46.0 | 2.58e-01 | 100.0% | 59.6% |
| None | — | 0.51 | 41.0 | 2.60e-01 | 100.0% | 38.6% | |
| 4424678 | 1170.1.1.1 ↗ | beta barrels › IL8-related › IL8-related › IL8 › IL8 | 0.50 | 41.0 | 3.78e-01 | 88.5% | 96.9% |
| 4041632 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.50 | 44.0 | 3.16e-01 | 98.1% | 89.0% |
D2
medium
residues 146-195
Domain cluster:
representative