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LSDeep1_scaffold_41_prodigal-single.1__X__X__00495

Bact-Vir

LSDeep1_scaffold_41_prodigal-single.1__X__X__00495

Identity

Kingdom:
phage

Quality

93.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 41-171
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4edjA02 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.63 30.0 3.40e-01 87.8% 58.2%
1ltlA03 2.20.28.10 Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › 0.53 19.0 2.92e-01 91.6% 81.6%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4952487 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.53 16.0 2.79e-01 83.2% 80.0%
4607892 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.51 15.0 2.77e-01 84.0% 85.0%
3990816 355.1.1.0 ↗ few secondary structure elements › Trefoil/Plexin domain-like › Trefoil/Plexin domain-like › Trefoil/Plexin domain-like 0.51 21.0 2.86e-01 84.7% 75.0%