←Back to structures
LSDeep1_scaffold_41_prodigal-single.1__X__X__00503
Bact-VirLSDeep1_scaffold_41_prodigal-single.1__X__X__00503
Identity
- Kingdom:
- phage
Quality
84.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 87-207_570-630
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3rgcA01 | 1.10.4030.10 | Mainly Alpha › Orthogonal Bundle › Triger factor/SurA peptide-binding fold › Porin chaperone SurA, peptide-binding domain | 0.61 | 50.0 | 5.20e-01 | 87.4% | 97.6% |
| 5d18A00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.58 | 31.0 | 3.03e-01 | 90.1% | 44.1% |
| 3nrkA01 | 1.10.4030.10 | Mainly Alpha › Orthogonal Bundle › Triger factor/SurA peptide-binding fold › Porin chaperone SurA, peptide-binding domain | 0.57 | 52.0 | 5.03e-01 | 97.3% | 97.5% |
| 3q5dA02 | 1.20.58.420 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › AHSP | 0.57 | 25.0 | 3.29e-01 | 86.8% | 73.2% |
| 4nooB00 | 1.10.8.1160 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.56 | 23.0 | 3.06e-01 | 79.1% | 67.4% |
| 3mvpA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.55 | 28.0 | 3.09e-01 | 90.1% | 56.4% |
| 4jndA01 | 1.10.1740.220 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › | 0.51 | 28.0 | 3.22e-01 | 73.1% | 72.3% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4103812 | 589.1.1.1 ↗ | alpha arrays › Triger factor/SurA peptide-binding domain-like › Triger factor/SurA peptide-binding domain-like › Porin chaperone SurA, peptide-binding domain › SurA_N | 0.74 | 63.0 | 6.38e-01 | 87.9% | 97.8% |
| 3972335 | 589.1.1.0 ↗ | alpha arrays › Triger factor/SurA peptide-binding domain-like › Triger factor/SurA peptide-binding domain-like › Porin chaperone SurA, peptide-binding domain | 0.73 | 62.0 | 6.47e-01 | 87.4% | 99.4% |
| 4502641 | 589.1.1.1 ↗ | alpha arrays › Triger factor/SurA peptide-binding domain-like › Triger factor/SurA peptide-binding domain-like › Porin chaperone SurA, peptide-binding domain › SurA_N | 0.72 | 62.0 | 6.23e-01 | 89.6% | 95.7% |
| 4465267 | 589.1.1.1 ↗ | alpha arrays › Triger factor/SurA peptide-binding domain-like › Triger factor/SurA peptide-binding domain-like › Porin chaperone SurA, peptide-binding domain › SurA_N | 0.72 | 61.0 | 6.20e-01 | 87.9% | 98.3% |
| 4509685 | 589.1.1.1 ↗ | alpha arrays › Triger factor/SurA peptide-binding domain-like › Triger factor/SurA peptide-binding domain-like › Porin chaperone SurA, peptide-binding domain › SurA_N | 0.72 | 62.0 | 6.34e-01 | 90.1% | 96.0% |
| 4484014 | 589.1.1.1 ↗ | alpha arrays › Triger factor/SurA peptide-binding domain-like › Triger factor/SurA peptide-binding domain-like › Porin chaperone SurA, peptide-binding domain › SurA_N | 0.72 | 61.0 | 6.19e-01 | 88.5% | 95.5% |
| 4578235 | 589.1.1.1 ↗ | alpha arrays › Triger factor/SurA peptide-binding domain-like › Triger factor/SurA peptide-binding domain-like › Porin chaperone SurA, peptide-binding domain › SurA_N | 0.71 | 60.0 | 6.23e-01 | 87.9% | 98.2% |
| 4335352 | 589.1.1.0 ↗ | alpha arrays › Triger factor/SurA peptide-binding domain-like › Triger factor/SurA peptide-binding domain-like › Porin chaperone SurA, peptide-binding domain | 0.71 | 60.0 | 4.60e-01 | 87.9% | 99.2% |
| 4044317 | 589.1.1.1 ↗ | alpha arrays › Triger factor/SurA peptide-binding domain-like › Triger factor/SurA peptide-binding domain-like › Porin chaperone SurA, peptide-binding domain › SurA_N | 0.71 | 61.0 | 6.25e-01 | 89.6% | 96.6% |
| 4249265 | 589.1.1.1 ↗ | alpha arrays › Triger factor/SurA peptide-binding domain-like › Triger factor/SurA peptide-binding domain-like › Porin chaperone SurA, peptide-binding domain › SurA_N | 0.71 | 62.0 | 6.24e-01 | 91.8% | 94.1% |
| 4205921 | 589.1.1.1 ↗ | alpha arrays › Triger factor/SurA peptide-binding domain-like › Triger factor/SurA peptide-binding domain-like › Porin chaperone SurA, peptide-binding domain › SurA_N | 0.71 | 61.0 | 6.14e-01 | 89.6% | 98.3% |
| 4281217 | 589.1.1.1 ↗ | alpha arrays › Triger factor/SurA peptide-binding domain-like › Triger factor/SurA peptide-binding domain-like › Porin chaperone SurA, peptide-binding domain › SurA_N | 0.70 | 61.0 | 6.19e-01 | 91.2% | 95.5% |
| 4534556 | 589.1.1.1 ↗ | alpha arrays › Triger factor/SurA peptide-binding domain-like › Triger factor/SurA peptide-binding domain-like › Porin chaperone SurA, peptide-binding domain › SurA_N | 0.69 | 59.0 | 6.03e-01 | 89.6% | 97.7% |
| 3387651 | 589.1.1.1 ↗ | alpha arrays › Triger factor/SurA peptide-binding domain-like › Triger factor/SurA peptide-binding domain-like › Porin chaperone SurA, peptide-binding domain › SurA_N | 0.67 | 55.0 | 5.84e-01 | 87.9% | 97.5% |
| 4366393 | 589.1.1.1 ↗ | alpha arrays › Triger factor/SurA peptide-binding domain-like › Triger factor/SurA peptide-binding domain-like › Porin chaperone SurA, peptide-binding domain › SurA_N | 0.65 | 55.0 | 5.61e-01 | 90.1% | 98.3% |
| 4153633 | 589.1.1.0 ↗ | alpha arrays › Triger factor/SurA peptide-binding domain-like › Triger factor/SurA peptide-binding domain-like › Porin chaperone SurA, peptide-binding domain | 0.64 | 58.0 | 4.42e-01 | 95.6% | 99.2% |
| None | — | 0.64 | 56.0 | 4.31e-01 | 94.0% | 99.0% | |
| 4431778 | 589.1.1.1 ↗ | alpha arrays › Triger factor/SurA peptide-binding domain-like › Triger factor/SurA peptide-binding domain-like › Porin chaperone SurA, peptide-binding domain › SurA_N | 0.63 | 56.0 | 5.53e-01 | 95.6% | 98.5% |
| 3697052 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.53 | 25.0 | 2.41e-01 | 72.0% | 37.7% |
D2
medium
residues 221-235_468-569
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3nrkA02 | 3.10.50.40 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.66 | 56.0 | 5.80e-01 | 89.7% | 99.1% |
| 5l10B00 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.58 | 40.0 | 3.59e-01 | 70.9% | 68.2% |
| 1l3lA01 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.56 | 39.0 | 3.51e-01 | 71.8% | 71.2% |
| 5l09B00 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.54 | 37.0 | 3.39e-01 | 70.9% | 59.1% |
| 1ywhA01 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.53 | 26.0 | 3.07e-01 | 89.7% | 64.2% |
| 1t7vA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 27.0 | 2.98e-01 | 88.9% | 61.1% |
| 3mahA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.52 | 23.0 | 2.87e-01 | 86.3% | 64.3% |
| 2lqjA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.51 | 25.0 | 2.76e-01 | 80.3% | 53.2% |
| 3v8uA02 | 2.40.160.90 | Mainly Beta › Beta Barrel › Porin › | 0.51 | 41.0 | 3.64e-01 | 88.9% | 93.3% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4266766 | 284.1.1.0 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like | 0.70 | 61.0 | 4.66e-01 | 92.3% | 100.0% |
| 3939862 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.59 | 40.0 | 4.10e-01 | 89.7% | 71.8% |
| 2999708 | 223.1.1.7 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › Autoind_bind | 0.57 | 39.0 | 3.46e-01 | 70.9% | 67.6% |
| 3922889 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.55 | 38.0 | 3.86e-01 | 89.7% | 72.2% |
| 3607891 | 2484.1.1.16 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_HII | 0.53 | 47.0 | 3.76e-01 | 100.0% | 84.4% |
| 4072642 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.53 | 30.0 | 2.72e-01 | 90.6% | 40.6% |
| 3593247 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.53 | 46.0 | 3.69e-01 | 99.1% | 84.1% |
| 3510118 | 4076.1.1.0 ↗ | a+b two layers › L9 N-domain-like › L9 N-domain-like › L9 N-domain-like | 0.53 | 26.0 | 3.55e-01 | 82.1% | 98.2% |
| 3929392 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.52 | 37.0 | 3.62e-01 | 88.0% | 67.2% |
| 4592153 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.50 | 29.0 | 3.17e-01 | 90.6% | 66.0% |
D3
medium
residues 267-292_367-436
Domain cluster:
rep: CAKLQF020000009.1__CAH1083462.1__SAMEA5780031_02006__00101__D179-274
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3nrkA02 | 3.10.50.40 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.68 | 63.0 | 6.03e-01 | 100.0% | 100.0% |
| 3gtyX02 | 3.10.50.30 | Alpha Beta › Roll › Chitinase A; domain 3 › Transcription elongation factor, GreA/GreB, C-terminal domain | 0.68 | 47.0 | 5.06e-01 | 100.0% | 82.1% |
| 5tvlA01 | 3.10.50.40 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.64 | 58.0 | 5.68e-01 | 97.9% | 94.1% |
| 5ez1A01 | 3.10.50.40 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.63 | 58.0 | 5.72e-01 | 99.0% | 100.0% |
| 7altB01 | 2.60.40.3510 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 45.0 | 3.86e-01 | 97.9% | 100.0% |
| 3oq2A00 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 39.0 | 3.90e-01 | 99.0% | 76.8% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3701144 | 284.1.1.0 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like | 0.75 | 53.0 | 5.50e-01 | 100.0% | 77.8% |
| 3838512 | 284.1.1.0 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like | 0.73 | 57.0 | 4.14e-01 | 100.0% | 31.1% |
| 3964206 | 284.1.1.7 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like › Rotamase_2 | 0.72 | 62.0 | 6.43e-01 | 100.0% | 98.9% |
| 4335352 | 589.1.1.0 ↗ | alpha arrays › Triger factor/SurA peptide-binding domain-like › Triger factor/SurA peptide-binding domain-like › Porin chaperone SurA, peptide-binding domain | 0.70 | 65.0 | 4.21e-01 | 99.0% | 26.7% |
| 4208583 | 284.1.1.3 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like › Rotamase | 0.69 | 65.0 | 6.28e-01 | 100.0% | 100.0% |
| 3887625 | 382.1.1.4 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › ecTbetaR2 | 0.69 | 43.0 | 4.21e-01 | 99.0% | 57.1% |
| 3963298 | 284.1.1.0 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like | 0.67 | 62.0 | 6.16e-01 | 100.0% | 97.0% |
| 4339408 | 284.1.1.3 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like › Rotamase | 0.67 | 60.0 | 6.13e-01 | 99.0% | 100.0% |
| 4074427 | 284.1.1.3 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like › Rotamase | 0.66 | 61.0 | 5.90e-01 | 100.0% | 98.1% |
| 4350483 | 284.1.1.8 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like › Rotamase_3 | 0.66 | 60.0 | 5.86e-01 | 100.0% | 90.5% |
| 4092171 | 284.1.1.3 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like › Rotamase | 0.65 | 60.0 | 5.93e-01 | 100.0% | 99.0% |
| 1836662 | 284.1.1.3 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like › Rotamase | 0.64 | 59.0 | 5.76e-01 | 100.0% | 97.1% |
| 3399432 | 382.1.1.14 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › DUF753 | 0.61 | 30.0 | 3.28e-01 | 99.0% | 53.8% |
| 3685707 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.59 | 40.0 | 3.08e-01 | 99.0% | 28.9% |
| 3228319 | 382.1.1.6 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › QVR | 0.57 | 37.0 | 3.75e-01 | 99.0% | 66.3% |
| 3924006 | 11.2.1.52 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2_nem | 0.53 | 47.0 | 4.15e-01 | 99.0% | 97.9% |
| 4303852 | 301.8.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › 4'-phosphopantetheinyl transferase › 4'-phosphopantetheinyl transferase › ACPS | 0.52 | 35.0 | 3.16e-01 | 70.8% | 91.0% |
| 3938202 | 11.2.1.6 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › MNNL | 0.51 | 43.0 | 3.91e-01 | 93.8% | 100.0% |
| 3926738 | 11.2.1.52 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2_nem | 0.51 | 44.0 | 4.02e-01 | 99.0% | 100.0% |
D4
medium
residues 293-366
Domain cluster:
representative
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1kutB01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.68 | 35.0 | 3.35e-01 | 77.0% | 40.4% |
| 1x9mA03 | 3.30.70.370 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.67 | 42.0 | 3.18e-01 | 86.5% | 26.4% |
| 2felA00 | 1.20.200.10 | Mainly Alpha › Up-down Bundle › Fumarase C; Chain A, domain 2 › Fumarase/aspartase (Central domain) | 0.61 | 53.0 | 3.48e-01 | 100.0% | 46.3% |
| 3crvA02 | 1.10.275.30 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › | 0.58 | 39.0 | 3.49e-01 | 70.3% | 68.5% |
| 2e55A00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.58 | 45.0 | 3.37e-01 | 87.8% | 80.8% |
| 4qxdA01 | 3.30.540.10 | Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 | 0.56 | 39.0 | 3.10e-01 | 73.0% | 50.0% |
| 3uifA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.56 | 38.0 | 2.67e-01 | 70.3% | 34.4% |
| 3l7wA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 47.0 | 4.15e-01 | 90.5% | 85.7% |
| 2looA02 | 1.10.10.1740 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Transmembrane protein 14-like | 0.56 | 34.0 | 3.43e-01 | 77.0% | 58.7% |
| 1yyvB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 42.0 | 3.75e-01 | 83.8% | 76.8% |
| 3e9lA02 | 1.20.80.40 | Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › Prp8 RNase H domain, fingers region | 0.55 | 42.0 | 3.91e-01 | 82.4% | 67.4% |
| 4h3tA02 | 1.10.132.100 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › | 0.55 | 40.0 | 3.30e-01 | 78.4% | 48.9% |
| 1xttB00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.55 | 44.0 | 3.29e-01 | 91.9% | 83.2% |
| 3c4nA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.54 | 41.0 | 2.94e-01 | 82.4% | 45.7% |
| 5jciA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.54 | 43.0 | 3.08e-01 | 85.1% | 94.3% |
| 1d4cA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.54 | 40.0 | 2.72e-01 | 82.4% | 37.2% |
| 4hqeA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 40.0 | 3.59e-01 | 82.4% | 77.1% |
| 5adxJ01 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.52 | 37.0 | 3.45e-01 | 79.7% | 59.1% |
| 2rdpA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 38.0 | 3.14e-01 | 78.4% | 57.9% |
| 4esbA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 42.0 | 3.78e-01 | 87.8% | 87.4% |
| 4gs5A01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.52 | 31.0 | 2.26e-01 | 86.5% | 17.6% |
| 1jp4A01 | 3.30.540.10 | Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 | 0.51 | 37.0 | 2.96e-01 | 79.7% | 51.4% |
| 5i9eA03 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.51 | 39.0 | 3.53e-01 | 87.8% | 69.9% |
ECOD (52)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3775826 | 4016.1.1.0 ↗ | alpha bundles › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase | 0.72 | 51.0 | 4.05e-01 | 73.0% | 46.9% |
| 5048714 | 223.2.1.5 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 | 0.69 | 38.0 | 3.01e-01 | 90.5% | 27.9% |
| 3417192 | 327.11.2.27 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_Vigilin | 0.68 | 26.0 | 3.18e-01 | 81.1% | 48.0% |
| 5040756 | 3843.1.1.0 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K | 0.68 | 42.0 | 3.80e-01 | 98.6% | 48.4% |
| 3924318 | 6166.1.1.0 ↗ | alpha bundles › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 | 0.66 | 48.0 | 3.55e-01 | 77.0% | 36.4% |
| 5076693 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.65 | 47.0 | 3.97e-01 | 75.7% | 82.5% |
| 3998938 | 6110.1.1.1 ↗ | alpha superhelices › Linker domain of cytoplasmic dynein heavy chain › Linker domain of cytoplasmic dynein heavy chain › Linker domain of cytoplasmic dynein heavy chain › DHC_N2 | 0.64 | 53.0 | 3.15e-01 | 87.8% | 26.1% |
| 4251053 | 4106.1.1.1 ↗ | few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC | 0.64 | 48.0 | 3.21e-01 | 77.0% | 80.0% |
| 3391689 | 5054.1.1.1 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Lig_chan | 0.64 | 47.0 | 3.53e-01 | 77.0% | 51.1% |
| 3376780 | 1021.1.1.0 ↗ | a+b two layers › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases | 0.64 | 39.0 | 3.73e-01 | 100.0% | 52.9% |
| 4008202 | 192.8.1.60 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › DUF2542 | 0.63 | 45.0 | 4.43e-01 | 87.8% | 70.9% |
| 3839790 | 2008.1.1.95 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DpnII | 0.62 | 54.0 | 3.74e-01 | 100.0% | 55.9% |
| 3928288 | 1021.1.1.0 ↗ | a+b two layers › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases | 0.62 | 39.0 | 3.29e-01 | 94.6% | 39.2% |
| 3655694 | 4992.1.1.0 ↗ | extended segments › RelB-like › RelB-like › RelB-like | 0.62 | 44.0 | 4.25e-01 | 77.0% | 65.9% |
| 3800197 | 1021.1.1.0 ↗ | a+b two layers › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases | 0.61 | 37.0 | 3.51e-01 | 91.9% | 50.0% |
| 4025072 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.60 | 45.0 | 3.88e-01 | 98.6% | 51.3% |
| 3783976 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.60 | 45.0 | 4.17e-01 | 78.4% | 66.7% |
| 3221654 | 106.1.1.0 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like | 0.58 | 48.0 | 3.82e-01 | 94.6% | 43.6% |
| 3350649 | 192.8.1.342 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › PHM7_cyt | 0.58 | 43.0 | 3.97e-01 | 78.4% | 66.3% |
| 3716174 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.58 | 47.0 | 4.11e-01 | 86.5% | 61.8% |
| 4981980 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.58 | 43.0 | 3.71e-01 | 78.4% | 51.3% |
| 3790375 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.58 | 45.0 | 3.79e-01 | 94.6% | 49.6% |
| 4995788 | 3218.1.1.0 ↗ | a+b duplicates or obligate multimers › small terminase oligomerization domain › small terminase oligomerization domain › small terminase oligomerization domain | 0.57 | 35.0 | 3.95e-01 | 73.0% | 84.9% |
| 3915446 | 6166.1.1.1 ↗ | alpha bundles › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › ERG4_ERG24 | 0.57 | 46.0 | 3.43e-01 | 90.5% | 66.7% |
| 4928248 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 44.0 | 3.73e-01 | 86.5% | 66.2% |
| 4035697 | 5054.1.1.7 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › KdpA | 0.56 | 41.0 | 3.55e-01 | 78.4% | 81.7% |
| 3498520 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.56 | 40.0 | 2.63e-01 | 75.7% | 20.0% |
| 3362479 | 6166.1.1.1 ↗ | alpha bundles › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › ERG4_ERG24 | 0.56 | 46.0 | 3.52e-01 | 90.5% | 76.5% |
| 3202208 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.56 | 42.0 | 3.26e-01 | 78.4% | 71.3% |
| 4077509 | 7573.1.1.0 ↗ | a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like | 0.56 | 42.0 | 3.20e-01 | 83.8% | 90.0% |
| 3718609 | 109.4.1.726 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DHC_N1 | 0.55 | 42.0 | 2.90e-01 | 81.1% | 40.8% |
| 3347147 | 306.7.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain › Trigger_N | 0.55 | 49.0 | 4.09e-01 | 100.0% | 58.9% |
| 3756402 | 5054.1.1.2 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans | 0.55 | 45.0 | 2.95e-01 | 95.9% | 50.9% |
| 4889887 | 4964.1.1.1 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › DNA_pol_A | 0.55 | 45.0 | 3.58e-01 | 94.6% | 44.5% |
| 4067342 | 5069.1.1.15 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Cytochrom_C_asm | 0.55 | 43.0 | 2.88e-01 | 90.5% | 28.1% |
| 5024287 | 103.5.1.11 ↗ | alpha arrays › RuvA-C › post-HMGL domain-like › post-HMGL domain-like › DUF2067 | 0.55 | 40.0 | 3.99e-01 | 77.0% | 82.7% |
| 4023424 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.54 | 43.0 | 2.63e-01 | 87.8% | 98.8% |
| 4003270 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.54 | 45.0 | 3.02e-01 | 97.3% | 49.1% |
| 3275078 | 6166.1.1.1 ↗ | alpha bundles › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › ERG4_ERG24 | 0.54 | 47.0 | 3.32e-01 | 95.9% | 69.5% |
| 3176504 | 7573.1.1.4 ↗ | a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › UPRTase | 0.54 | 44.0 | 3.22e-01 | 95.9% | 78.7% |
| 4023956 | 3871.1.1.1 ↗ | alpha duplicates or obligate multimers › PHIST › PHIST › PHIST › PRESAN | 0.53 | 46.0 | 3.84e-01 | 95.9% | 100.0% |
| 3627409 | 6166.1.1.1 ↗ | alpha bundles › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › ERG4_ERG24 | 0.53 | 47.0 | 3.43e-01 | 97.3% | 72.0% |
| 3702909 | 6166.1.1.1 ↗ | alpha bundles › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › ERG4_ERG24 | 0.53 | 47.0 | 3.35e-01 | 97.3% | 68.5% |
| 4282188 | 5059.1.1.59 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EmrE | 0.53 | 46.0 | 3.07e-01 | 98.6% | 64.8% |
| 3299249 | 6166.1.1.1 ↗ | alpha bundles › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › ERG4_ERG24 | 0.53 | 46.0 | 3.30e-01 | 95.9% | 70.0% |
| 3667921 | 601.21.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › FAD-dependent thiol oxidase › FAD-dependent thiol oxidase › Evr1_Alr | 0.52 | 44.0 | 3.00e-01 | 94.6% | 70.2% |
| 3724382 | 3291.1.1.105 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Med14 | 0.52 | 46.0 | 3.61e-01 | 98.6% | 79.4% |
| 5079443 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.52 | 41.0 | 3.49e-01 | 89.2% | 98.5% |
| 4654415 | 7573.1.1.1 ↗ | a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran | 0.52 | 40.0 | 3.02e-01 | 86.5% | 83.1% |
| 3471111 | 7573.1.1.4 ↗ | a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › UPRTase | 0.51 | 40.0 | 2.94e-01 | 89.2% | 70.7% |
| 3985490 | 192.2.1.5 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › DUF4376 | 0.51 | 43.0 | 3.61e-01 | 97.3% | 54.8% |
| 3574714 | 109.26.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains › Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains › Nucleoporin_C | 0.50 | 39.0 | 2.89e-01 | 83.8% | 64.7% |