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LSDeep1_scaffold_41_prodigal-single.1__X__X__00512
Bact-VirLSDeep1_scaffold_41_prodigal-single.1__X__X__00512
Identity
- Kingdom:
- phage
Quality
76.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-85
D2
high
residues 91-223_533-550
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13519.13 best | VWA_2 | 32.8 | 1.20e-07 | 66.2% | 88.9% |
CATH (52)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7xlqD02 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.75 | 70.0 | 6.44e-01 | 100.0% | 91.1% |
| 4f1jA00 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.75 | 69.0 | 6.27e-01 | 100.0% | 93.0% |
| 1shuX00 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.73 | 68.0 | 6.39e-01 | 100.0% | 92.3% |
| 4fx5A02 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.73 | 68.0 | 6.34e-01 | 100.0% | 96.7% |
| 3ibsA00 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.73 | 68.0 | 6.07e-01 | 100.0% | 94.7% |
| 1q0pA00 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.72 | 66.0 | 6.06e-01 | 100.0% | 99.5% |
| 2iueA00 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.71 | 66.0 | 5.83e-01 | 100.0% | 94.3% |
| 1bho100 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.71 | 66.0 | 6.07e-01 | 100.0% | 95.8% |
| 6snkA01 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.70 | 65.0 | 6.08e-01 | 100.0% | 96.2% |
| 1yvrA01 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.70 | 65.0 | 5.87e-01 | 100.0% | 80.6% |
| 5y58B01 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.68 | 63.0 | 5.96e-01 | 100.0% | 99.4% |
| 2kpoA00 | 3.40.50.11230 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.67 | 42.0 | 4.78e-01 | 100.0% | 84.5% |
| 3jy6D02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.65 | 47.0 | 4.98e-01 | 100.0% | 83.7% |
| 3u80A00 | 3.40.50.9100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Dehydroquinase, class II | 0.60 | 45.0 | 4.83e-01 | 100.0% | 92.1% |
| 1gtzA00 | 3.40.50.9100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Dehydroquinase, class II | 0.60 | 50.0 | 5.06e-01 | 100.0% | 91.3% |
| 2yfkA01 | 3.40.50.1370 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase | 0.59 | 41.0 | 3.81e-01 | 100.0% | 56.6% |
| 1u04A03 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.59 | 45.0 | 4.24e-01 | 100.0% | 67.4% |
| 1j5xA02 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.58 | 39.0 | 3.99e-01 | 100.0% | 70.0% |
| 2p11A01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.57 | 47.0 | 4.85e-01 | 100.0% | 93.1% |
| 3n0xA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.57 | 47.0 | 4.58e-01 | 88.1% | 90.2% |
| 2l82A00 | 3.40.50.11230 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.57 | 49.0 | 4.81e-01 | 100.0% | 87.0% |
| 3gdgA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 51.0 | 4.23e-01 | 100.0% | 83.5% |
| 3w0lD02 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.56 | 51.0 | 3.90e-01 | 100.0% | 50.6% |
| 2we8A02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 49.0 | 4.94e-01 | 100.0% | 93.5% |
| 1sh7A00 | 3.40.50.200 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidase S8/S53 domain | 0.55 | 50.0 | 4.08e-01 | 100.0% | 84.7% |
| 3ly1A02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.55 | 45.0 | 3.92e-01 | 100.0% | 58.7% |
| 4j1qA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 49.0 | 3.61e-01 | 100.0% | 52.0% |
| 2qe6A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.54 | 47.0 | 3.97e-01 | 96.0% | 92.5% |
| 1mv8A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 49.0 | 4.49e-01 | 100.0% | 94.6% |
| 1uyvA01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.54 | 46.0 | 3.91e-01 | 94.0% | 90.1% |
| 4xqcA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 49.0 | 4.66e-01 | 100.0% | 86.0% |
| 1gcyA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.53 | 41.0 | 3.17e-01 | 82.1% | 85.7% |
| 3fysA01 | 3.40.50.10170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 42.0 | 4.18e-01 | 100.0% | 83.0% |
| 3qitB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.52 | 48.0 | 3.89e-01 | 100.0% | 89.4% |
| 3uc9A00 | 3.40.50.11960 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 48.0 | 4.56e-01 | 100.0% | 87.2% |
| 2o55A00 | 3.20.20.190 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase | 0.52 | 41.0 | 3.47e-01 | 82.8% | 90.9% |
| 3s6jA01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.52 | 45.0 | 4.55e-01 | 100.0% | 94.0% |
| 3cvjC00 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.52 | 47.0 | 4.04e-01 | 100.0% | 66.4% |
| 3a7eA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 46.0 | 4.12e-01 | 97.4% | 70.3% |
| 3vywA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 43.0 | 3.81e-01 | 93.4% | 86.8% |
| 1m8pA03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 46.0 | 4.38e-01 | 100.0% | 89.1% |
| 4mzyA02 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.51 | 42.0 | 4.05e-01 | 86.8% | 92.3% |
| 4zocA02 | 3.40.50.1700 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycoside hydrolase family 3 C-terminal domain | 0.51 | 44.0 | 3.84e-01 | 97.4% | 85.4% |
| 1rqeA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.51 | 42.0 | 3.43e-01 | 88.1% | 80.6% |
| 4s1wB01 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.51 | 39.0 | 3.57e-01 | 100.0% | 61.4% |
| 3mbhA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.51 | 45.0 | 3.71e-01 | 100.0% | 77.2% |
| 6pwkA02 | 3.20.20.450 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain | 0.51 | 44.0 | 3.85e-01 | 94.7% | 87.4% |
| 3euaF01 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.50 | 39.0 | 3.89e-01 | 100.0% | 78.8% |
| 5dn8A02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 45.0 | 4.44e-01 | 100.0% | 92.0% |
| 1sulB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 45.0 | 4.16e-01 | 100.0% | 82.1% |
| 4a2bA03 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.50 | 30.0 | 3.60e-01 | 98.7% | 92.6% |
| 4nq1A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.50 | 41.0 | 3.34e-01 | 88.1% | 82.8% |
ECOD (92)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3270858 | 2006.1.6.13 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_3 | 0.78 | 74.0 | 6.85e-01 | 100.0% | 93.0% |
| 3389620 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.78 | 73.0 | 6.44e-01 | 100.0% | 87.9% |
| 3536069 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.78 | 74.0 | 6.75e-01 | 100.0% | 87.4% |
| 3865515 | 2006.1.6.13 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_3 | 0.78 | 73.0 | 6.61e-01 | 100.0% | 83.0% |
| 5023800 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.77 | 72.0 | 6.72e-01 | 100.0% | 93.5% |
| 3882595 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.76 | 71.0 | 6.07e-01 | 100.0% | 90.2% |
| 4992645 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.76 | 71.0 | 6.76e-01 | 100.0% | 94.9% |
| 3260278 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.75 | 70.0 | 6.14e-01 | 100.0% | 87.3% |
| 5061674 | 2006.1.6.15 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF58 | 0.75 | 71.0 | 6.16e-01 | 100.0% | 84.1% |
| 4968153 | 2006.1.6.15 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF58 | 0.75 | 70.0 | 6.47e-01 | 100.0% | 94.2% |
| 5004192 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.75 | 70.0 | 6.18e-01 | 100.0% | 76.1% |
| 3557596 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.75 | 69.0 | 6.17e-01 | 100.0% | 98.1% |
| 3550568 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.75 | 70.0 | 5.94e-01 | 100.0% | 73.6% |
| 3577853 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.75 | 69.0 | 5.86e-01 | 98.7% | 79.1% |
| 3972521 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.74 | 69.0 | 6.09e-01 | 100.0% | 89.3% |
| 5018603 | 2006.1.6.15 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF58 | 0.74 | 69.0 | 5.97e-01 | 100.0% | 91.2% |
| 4278664 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.74 | 69.0 | 5.55e-01 | 100.0% | 97.5% |
| 5069853 | 2006.1.6.15 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF58 | 0.74 | 69.0 | 6.00e-01 | 100.0% | 82.2% |
| 3531630 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.74 | 69.0 | 6.29e-01 | 100.0% | 93.8% |
| 5052354 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.74 | 69.0 | 6.13e-01 | 100.0% | 84.8% |
| 4997976 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.74 | 69.0 | 6.21e-01 | 100.0% | 89.0% |
| 4998535 | 2006.1.6.45 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › PF30231 | 0.74 | 69.0 | 6.10e-01 | 100.0% | 93.3% |
| 3933629 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.74 | 68.0 | 6.36e-01 | 100.0% | 89.2% |
| 3930561 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.74 | 68.0 | 6.36e-01 | 100.0% | 88.1% |
| 5059310 | 2006.1.6.15 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF58 | 0.73 | 69.0 | 6.10e-01 | 100.0% | 88.5% |
| 3974415 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.73 | 68.0 | 6.06e-01 | 100.0% | 91.9% |
| 5028554 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.73 | 68.0 | 6.16e-01 | 100.0% | 90.5% |
| 3959674 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.73 | 68.0 | 6.14e-01 | 99.3% | 94.9% |
| 136176 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.73 | 68.0 | 6.07e-01 | 100.0% | 94.7% |
| None | — | 0.73 | 67.0 | 5.69e-01 | 98.0% | 63.0% | |
| 5037117 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.73 | 68.0 | 6.07e-01 | 100.0% | 91.2% |
| 4997796 | 2006.1.6.45 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › PF30231 | 0.73 | 68.0 | 5.39e-01 | 100.0% | 65.7% |
| 3630637 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.73 | 68.0 | 6.02e-01 | 100.0% | 89.5% |
| 4128742 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.73 | 66.0 | 5.91e-01 | 98.0% | 70.5% |
| 3933628 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.73 | 67.0 | 6.40e-01 | 100.0% | 93.7% |
| 3930562 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.73 | 67.0 | 6.33e-01 | 100.0% | 96.1% |
| 3250299 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.72 | 67.0 | 5.78e-01 | 100.0% | 85.7% |
| 3931009 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.72 | 67.0 | 6.31e-01 | 100.0% | 90.6% |
| 5010754 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.72 | 67.0 | 6.21e-01 | 100.0% | 85.3% |
| 4401259 | 2006.1.6.21 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_CoxE | 0.72 | 66.0 | 5.60e-01 | 98.0% | 61.7% |
| 4989225 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.72 | 67.0 | 6.06e-01 | 100.0% | 91.5% |
| 3242179 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.72 | 67.0 | 6.23e-01 | 100.0% | 90.8% |
| 4172565 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.72 | 67.0 | 5.84e-01 | 100.0% | 85.5% |
| 3931831 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.72 | 66.0 | 6.33e-01 | 100.0% | 98.3% |
| 4977399 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.72 | 67.0 | 5.85e-01 | 100.0% | 72.7% |
| 3529481 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.72 | 67.0 | 6.15e-01 | 100.0% | 90.0% |
| 3833868 | 2006.1.6.40 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF7788 | 0.72 | 66.0 | 5.56e-01 | 100.0% | 76.8% |
| 5025645 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.72 | 66.0 | 6.39e-01 | 100.0% | 99.4% |
| 5024101 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.72 | 66.0 | 5.98e-01 | 100.0% | 86.2% |
| 3937114 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.72 | 66.0 | 6.11e-01 | 100.0% | 85.8% |
| 3852148 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.71 | 66.0 | 5.92e-01 | 100.0% | 84.4% |
| 3937889 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.71 | 66.0 | 4.80e-01 | 100.0% | 41.8% |
| 3939973 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.71 | 66.0 | 6.13e-01 | 100.0% | 90.3% |
| 4985336 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.71 | 65.0 | 6.60e-01 | 99.3% | 99.3% |
| 3924012 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.71 | 66.0 | 6.18e-01 | 100.0% | 91.7% |
| 5062145 | 11.1.1.1411 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › VWA_3 | 0.71 | 66.0 | 5.34e-01 | 100.0% | 62.5% |
| 5017115 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.71 | 66.0 | 6.06e-01 | 99.3% | 94.7% |
| 5012913 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.71 | 66.0 | 5.92e-01 | 100.0% | 87.3% |
| 4964796 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.71 | 62.0 | 6.40e-01 | 100.0% | 97.9% |
| 3464177 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.71 | 54.0 | 5.87e-01 | 100.0% | 96.0% |
| 3440234 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.71 | 65.0 | 5.59e-01 | 100.0% | 78.7% |
| 3499184 | 2006.1.6.13 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_3 | 0.71 | 66.0 | 5.88e-01 | 100.0% | 82.4% |
| 3248188 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.71 | 65.0 | 5.92e-01 | 100.0% | 83.0% |
| 3927885 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.71 | 65.0 | 5.99e-01 | 100.0% | 87.9% |
| 3583891 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.71 | 63.0 | 4.09e-01 | 95.4% | 24.4% |
| 5018862 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.70 | 65.0 | 5.97e-01 | 100.0% | 88.2% |
| 4009542 | 2006.1.6.21 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_CoxE | 0.70 | 65.0 | 5.27e-01 | 100.0% | 55.8% |
| 4141558 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.70 | 64.0 | 5.95e-01 | 100.0% | 93.7% |
| None | — | 0.70 | 65.0 | 5.66e-01 | 100.0% | 85.9% | |
| 4937644 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.70 | 64.0 | 6.02e-01 | 100.0% | 91.9% |
| 5039945 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.70 | 65.0 | 5.92e-01 | 100.0% | 87.2% |
| 3674873 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.70 | 64.0 | 5.74e-01 | 100.0% | 91.4% |
| 3228925 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.69 | 64.0 | 5.96e-01 | 100.0% | 95.7% |
| 3257569 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.69 | 64.0 | 5.51e-01 | 100.0% | 90.4% |
| 5072653 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.69 | 64.0 | 5.87e-01 | 100.0% | 93.3% |
| 5076409 | 2006.1.6.21 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_CoxE | 0.69 | 64.0 | 5.87e-01 | 100.0% | 80.9% |
| 4943521 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.69 | 64.0 | 5.46e-01 | 100.0% | 70.5% |
| 3579644 | 2006.1.6.33 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_4 | 0.69 | 63.0 | 5.81e-01 | 100.0% | 87.7% |
| 4956639 | 2006.1.6.21 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_CoxE | 0.69 | 64.0 | 5.47e-01 | 100.0% | 69.1% |
| 3247943 | 2006.1.6.40 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF7788 | 0.69 | 62.0 | 5.86e-01 | 100.0% | 94.1% |
| 3667603 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.68 | 63.0 | 5.85e-01 | 100.0% | 95.3% |
| 5021669 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.68 | 63.0 | 6.16e-01 | 100.0% | 93.3% |
| 1505917 | 2007.1.2.13 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_6 | 0.67 | 49.0 | 5.16e-01 | 99.3% | 84.3% |
| 4384064 | 2006.1.6.33 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_4 | 0.67 | 62.0 | 5.37e-01 | 100.0% | 79.6% |
| 3927222 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.67 | 61.0 | 5.58e-01 | 100.0% | 92.3% |
| 3337017 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.65 | 43.0 | 4.59e-01 | 100.0% | 77.7% |
| 5078607 | 7542.1.2.3 ↗ | a/b three-layered sandwiches › Aconitase iron-sulfur domain › Aconitase iron-sulfur domain › Aconitase iron-sulfur domain II › AcnX_2nd | 0.64 | 33.0 | 3.99e-01 | 100.0% | 74.0% |
| 4943387 | 7542.1.2.4 ↗ | a/b three-layered sandwiches › Aconitase iron-sulfur domain › Aconitase iron-sulfur domain › Aconitase iron-sulfur domain II › PF28406 | 0.62 | 32.0 | 3.89e-01 | 100.0% | 76.8% |
| 4103800 | 2484.1.1.174 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH | 0.58 | 38.0 | 4.24e-01 | 99.3% | 84.2% |
| 4946250 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.58 | 45.0 | 4.55e-01 | 100.0% | 82.7% |
| 3799406 | 7516.1.1.16 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_43 | 0.53 | 43.0 | 3.63e-01 | 88.1% | 86.0% |
| 3940418 | 7510.1.1.1 ↗ | a/b three-layered sandwiches › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Iso_dh | 0.50 | 42.0 | 3.80e-01 | 100.0% | 65.9% |
D3
high
residues 322-464
Domain cluster:
representative
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2azmA01 | 3.40.50.10190 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain | 0.67 | 35.0 | 4.16e-01 | 100.0% | 73.3% |
| 3gvxB01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.62 | 44.0 | 4.88e-01 | 100.0% | 91.2% |
| 3l41A01 | 3.40.50.10190 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain | 0.62 | 33.0 | 3.88e-01 | 100.0% | 73.3% |
| 1p9lA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.62 | 50.0 | 5.17e-01 | 100.0% | 88.4% |
| 7p0jA01 | 3.40.50.10190 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain | 0.60 | 34.0 | 4.14e-01 | 98.6% | 87.8% |
| 2couA01 | 3.40.50.10190 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain | 0.59 | 32.0 | 3.97e-01 | 99.3% | 85.4% |
| 3nm6B00 | 3.40.50.1580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain | 0.58 | 51.0 | 4.47e-01 | 100.0% | 100.0% |
| 1cpyA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.57 | 52.0 | 3.93e-01 | 100.0% | 87.1% |
| 4l0mA00 | 3.40.50.1580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain | 0.57 | 50.0 | 4.34e-01 | 100.0% | 100.0% |
| 6pexA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 44.0 | 4.66e-01 | 99.3% | 92.2% |
| 1xdwA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 45.0 | 4.66e-01 | 100.0% | 92.5% |
| 2gcgA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 45.0 | 4.62e-01 | 99.3% | 92.6% |
| 3bioB01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 51.0 | 4.71e-01 | 100.0% | 81.9% |
| 5v7nA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 45.0 | 4.68e-01 | 100.0% | 97.7% |
| 3ia7A01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.52 | 48.0 | 4.08e-01 | 100.0% | 98.7% |
| 3kbqB00 | 3.40.980.10 | Alpha Beta › 3-Layer(aba) Sandwich › Molybdenum Cofactor Biosythetic Enzyme; Chain A › MoaB/Mog-like domain | 0.51 | 45.0 | 4.30e-01 | 97.9% | 98.2% |
| 3oesA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 47.0 | 4.58e-01 | 100.0% | 96.8% |
| 5nkkF01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 47.0 | 3.88e-01 | 100.0% | 74.2% |
| 5y8lB01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 46.0 | 4.47e-01 | 97.9% | 92.5% |
| 1ygyA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 43.0 | 4.42e-01 | 100.0% | 96.3% |
| 8bveB01 | 3.40.980.10 | Alpha Beta › 3-Layer(aba) Sandwich › Molybdenum Cofactor Biosythetic Enzyme; Chain A › MoaB/Mog-like domain | 0.51 | 45.0 | 4.41e-01 | 100.0% | 90.7% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3897282 | 7568.1.1.4 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › BRCT_2 | 0.68 | 35.0 | 4.55e-01 | 99.3% | 85.9% |
| 5061805 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.62 | 33.0 | 3.75e-01 | 94.4% | 66.4% |
| 5017111 | 2007.1.1.24 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › DUF4350 | 0.60 | 53.0 | 4.63e-01 | 95.8% | 93.3% |
| 4969796 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.56 | 29.0 | 3.38e-01 | 93.0% | 68.0% |
| 3736620 | 2011.2.1.0 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like | 0.56 | 50.0 | 4.08e-01 | 100.0% | 95.6% |
| 3633392 | 2011.2.1.1 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › PNP_UDP_1 | 0.56 | 49.0 | 3.95e-01 | 100.0% | 99.3% |
| 5054782 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.54 | 38.0 | 4.20e-01 | 100.0% | 86.7% |
| 4948456 | 7541.1.1.1 ↗ | a/b three-layered sandwiches › Molybdenum cofactor biosynthesis proteins › Molybdenum cofactor biosynthesis proteins › Molybdenum cofactor biosynthesis proteins › MoCF_biosynth | 0.54 | 44.0 | 4.33e-01 | 100.0% | 81.2% |
| 3634183 | 2011.2.1.0 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like | 0.54 | 48.0 | 3.99e-01 | 100.0% | 90.8% |
| 3484605 | 2004.1.1.16 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Arf | 0.53 | 49.0 | 4.38e-01 | 100.0% | 86.9% |
| 4110968 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.52 | 47.0 | 4.13e-01 | 100.0% | 80.5% |
| 4163747 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.52 | 47.0 | 4.35e-01 | 100.0% | 94.1% |
| 4946664 | 2004.1.1.16 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Arf | 0.52 | 48.0 | 4.37e-01 | 100.0% | 88.1% |
| None | — | 0.51 | 48.0 | 3.28e-01 | 100.0% | 37.3% | |
| 4228214 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.51 | 47.0 | 4.17e-01 | 100.0% | 86.0% |
| 4292847 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.51 | 46.0 | 3.35e-01 | 100.0% | 42.0% |
| 5049766 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.50 | 46.0 | 3.63e-01 | 100.0% | 79.7% |
| 3595377 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.50 | 46.0 | 3.62e-01 | 100.0% | 77.6% |
| 4983847 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.50 | 47.0 | 3.62e-01 | 100.0% | 76.9% |
D4
medium
residues 224-316
Domain cluster:
representative
CATH (32)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2yn5A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.66 | 52.0 | 5.58e-01 | 93.5% | 100.0% |
| 4yhbA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.65 | 47.0 | 4.20e-01 | 75.3% | 88.4% |
| 1jz7A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.65 | 57.0 | 5.33e-01 | 96.8% | 100.0% |
| 6lynD01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.65 | 55.0 | 5.72e-01 | 94.6% | 98.9% |
| 3uezC02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 51.0 | 5.42e-01 | 94.6% | 96.4% |
| 4dqlB01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.64 | 46.0 | 4.37e-01 | 74.2% | 89.9% |
| 1ddgA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.64 | 47.0 | 4.38e-01 | 77.4% | 93.9% |
| 6k2lA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.63 | 46.0 | 4.38e-01 | 76.3% | 96.4% |
| 4rs1B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 54.0 | 5.31e-01 | 96.8% | 94.2% |
| 2a74A05 | 2.60.40.1930 | Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain | 0.63 | 54.0 | 5.25e-01 | 94.6% | 96.2% |
| 2vzsA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 54.0 | 5.11e-01 | 96.8% | 100.0% |
| 1pqzA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 52.0 | 5.11e-01 | 95.7% | 100.0% |
| 1hi9A02 | 3.30.1360.130 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Dipeptide transport protein | 0.60 | 46.0 | 5.03e-01 | 80.6% | 98.7% |
| 2pkdA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 48.0 | 4.66e-01 | 88.2% | 94.4% |
| 4u7mA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 51.0 | 5.12e-01 | 93.5% | 92.6% |
| 1yq2A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 51.0 | 5.17e-01 | 96.8% | 100.0% |
| 3kyaA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 49.0 | 5.06e-01 | 91.4% | 97.6% |
| 4liqE01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 45.0 | 4.80e-01 | 92.5% | 98.7% |
| 1ep3B01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.59 | 43.0 | 4.23e-01 | 77.4% | 96.0% |
| 7ok5A05 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 48.0 | 4.94e-01 | 92.5% | 98.9% |
| 3p3yA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 50.0 | 4.83e-01 | 96.8% | 90.6% |
| 5nz7A01 | 2.70.98.40 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain | 0.57 | 49.0 | 3.33e-01 | 93.5% | 78.7% |
| 3alxC02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 46.0 | 4.46e-01 | 88.2% | 95.1% |
| 5wjmA02 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.56 | 49.0 | 4.63e-01 | 97.8% | 94.5% |
| 2qqpA03 | 2.60.40.4260 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 49.0 | 4.35e-01 | 100.0% | 89.1% |
| 3o4oC02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 44.0 | 4.23e-01 | 89.2% | 85.0% |
| 2ba1D01 | 3.30.230.70 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain | 0.54 | 43.0 | 3.40e-01 | 91.4% | 92.6% |
| 1vw3C01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.54 | 37.0 | 3.38e-01 | 73.1% | 64.9% |
| 1bihA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 45.0 | 4.37e-01 | 96.8% | 95.3% |
| 7cymA01 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.53 | 44.0 | 4.45e-01 | 93.5% | 97.8% |
| 2vckA00 | 3.40.1500.20 | Alpha Beta › 3-Layer(aba) Sandwich › oxygen-dependent coproporphyrinogen oxidase › | 0.52 | 41.0 | 3.28e-01 | 89.2% | 44.2% |
| 2ab5A02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.51 | 44.0 | 3.94e-01 | 98.9% | 85.8% |
ECOD (48)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4276523 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.73 | 63.0 | 6.46e-01 | 98.9% | 95.6% |
| 4645314 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.71 | 56.0 | 6.04e-01 | 94.6% | 97.5% |
| 5012403 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.69 | 59.0 | 4.86e-01 | 93.5% | 89.7% |
| 4997066 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.68 | 58.0 | 5.84e-01 | 92.5% | 100.0% |
| 3249347 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.67 | 53.0 | 5.62e-01 | 94.6% | 98.8% |
| 3905579 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.66 | 60.0 | 5.81e-01 | 100.0% | 98.1% |
| 3508566 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.66 | 59.0 | 5.62e-01 | 100.0% | 91.8% |
| 3178145 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.66 | 47.0 | 3.99e-01 | 74.2% | 68.7% |
| 3268665 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.65 | 57.0 | 5.24e-01 | 96.8% | 96.7% |
| 4937646 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.65 | 58.0 | 5.55e-01 | 97.8% | 97.1% |
| 5027295 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.65 | 54.0 | 5.57e-01 | 91.4% | 92.2% |
| 5079540 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.65 | 57.0 | 5.46e-01 | 96.8% | 98.1% |
| 3255470 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.64 | 56.0 | 5.64e-01 | 96.8% | 94.7% |
| 3277508 | 11.1.1.793 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7743 | 0.64 | 54.0 | 5.34e-01 | 93.5% | 100.0% |
| 3274941 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.63 | 52.0 | 5.44e-01 | 92.5% | 100.0% |
| 3875098 | 11.1.1.951 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › A2M, A2M_BRD, MG4 | 0.63 | 55.0 | 3.45e-01 | 97.8% | 20.8% |
| 3249366 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.63 | 50.0 | 5.33e-01 | 93.5% | 100.0% |
| 3487139 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 55.0 | 4.79e-01 | 96.8% | 81.4% |
| 4611017 | 11.1.1.872 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_ENGASE1_C | 0.62 | 55.0 | 5.13e-01 | 98.9% | 100.0% |
| 3264859 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 51.0 | 4.93e-01 | 91.4% | 100.0% |
| 5043293 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 51.0 | 4.97e-01 | 90.3% | 97.0% |
| 4025256 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.60 | 38.0 | 4.12e-01 | 75.3% | 76.2% |
| 5019170 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.59 | 45.0 | 4.20e-01 | 80.6% | 86.1% |
| 3370751 | 3156.1.1.4 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › Cu-oxidase | 0.59 | 45.0 | 4.03e-01 | 82.8% | 75.6% |
| 3941071 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 43.0 | 4.61e-01 | 94.6% | 97.3% |
| 4128836 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 47.0 | 3.84e-01 | 96.8% | 44.7% |
| 3473249 | 11.1.1.178 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_2 | 0.58 | 50.0 | 4.70e-01 | 100.0% | 97.5% |
| 5040269 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 47.0 | 4.92e-01 | 94.6% | 97.6% |
| 2996557 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.57 | 49.0 | 4.87e-01 | 96.8% | 96.0% |
| 5056374 | 11.1.5.153 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › CARDB | 0.57 | 42.0 | 4.58e-01 | 76.3% | 100.0% |
| 3927745 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 48.0 | 4.72e-01 | 96.8% | 95.0% |
| 1221818 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.56 | 48.0 | 4.84e-01 | 96.8% | 97.8% |
| 3002222 | 11.1.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Cadherin | 0.55 | 48.0 | 4.63e-01 | 96.8% | 96.2% |
| 3570025 | 11.1.1.620 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_TMEM132_6th | 0.55 | 46.0 | 4.36e-01 | 94.6% | 96.5% |
| 3877703 | 11.1.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Cadherin | 0.55 | 48.0 | 4.77e-01 | 98.9% | 98.9% |
| 3905920 | 11.1.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Cadherin | 0.55 | 48.0 | 4.56e-01 | 98.9% | 94.5% |
| 3242982 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 48.0 | 4.63e-01 | 100.0% | 94.3% |
| 3242976 | 11.1.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Cadherin | 0.54 | 45.0 | 4.64e-01 | 95.7% | 100.0% |
| 3416231 | 11.1.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Cadherin | 0.54 | 46.0 | 3.14e-01 | 100.0% | 38.8% |
| 3567392 | 11.1.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Cadherin | 0.54 | 46.0 | 4.64e-01 | 97.8% | 96.8% |
| 3880994 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 43.0 | 4.35e-01 | 90.3% | 96.8% |
| 3891329 | 11.1.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Cadherin | 0.54 | 44.0 | 3.84e-01 | 92.5% | 60.7% |
| 3927757 | 11.1.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Cadherin | 0.54 | 45.0 | 4.42e-01 | 96.8% | 96.2% |
| 2775348 | 11.1.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Cadherin | 0.53 | 44.0 | 4.32e-01 | 93.5% | 88.0% |
| 3928381 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 45.0 | 4.43e-01 | 100.0% | 97.0% |
| 3994279 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 44.0 | 4.38e-01 | 98.9% | 98.9% |
| 3996623 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.51 | 32.0 | 3.33e-01 | 88.2% | 65.6% |
| 3328921 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 42.0 | 4.00e-01 | 92.5% | 92.0% |
D5
medium
residues 470-526
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4knuA02 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.62 | 50.0 | 3.67e-01 | 91.2% | 87.4% |
| 4g65B02 | 3.30.70.1450 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Regulator of K+ conductance, C-terminal domain | 0.53 | 38.0 | 3.41e-01 | 82.5% | 95.7% |
| 1jhjA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 42.0 | 3.22e-01 | 100.0% | 73.3% |
| 7eu1A02 | 1.10.132.30 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › RNA polymerase Rpb1 funnel domain | 0.51 | 37.0 | 2.97e-01 | 82.5% | 67.2% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4957355 | 312.1.1.5 ↗ | a+b three layers › HIT-like › HIT-related › HIT-related › GalP_UDP_tr_C | 0.53 | 41.0 | 2.65e-01 | 89.5% | 24.5% |
| 3387126 | 4261.1.1.1 ↗ | a+b two layers › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA_C | 0.51 | 36.0 | 3.32e-01 | 78.9% | 95.0% |
| 5037980 | 4261.1.1.1 ↗ | a+b two layers › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA_C | 0.50 | 37.0 | 3.28e-01 | 84.2% | 96.8% |