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LSDeep1_scaffold_41_prodigal-single.1__X__X__00514

Bact-Vir

LSDeep1_scaffold_41_prodigal-single.1__X__X__00514

Identity

Kingdom:
phage

Quality

92.6 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 237-338
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF17863.8 best AAA_lid_2 52.4 5.40e-14 70.6% 91.8%
CATH (37)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2r44A03 1.10.8.80 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Magnesium chelatase subunit I, C-Terminal domain 0.94 87.0 8.17e-01 96.1% 83.1%
1g8pA02 1.10.8.80 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Magnesium chelatase subunit I, C-Terminal domain 0.93 62.0 7.11e-01 98.0% 88.5%
1fnnA01 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.83 48.0 4.91e-01 86.3% 59.4%
3uk6A02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.82 48.0 5.31e-01 85.3% 72.3%
2c9oB03 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.81 48.0 5.26e-01 85.3% 72.3%
2l09A01 1.10.8.550 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Proto-chlorophyllide reductase 57 kD subunit B 0.80 39.0 5.37e-01 86.3% 94.2%
2kruA01 1.10.8.550 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Proto-chlorophyllide reductase 57 kD subunit B 0.74 36.0 4.90e-01 90.2% 92.3%
7wd3A04 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.70 43.0 4.81e-01 75.5% 79.5%
1jwjA01 3.90.340.10 Alpha Beta › Alpha-Beta Complex › Nitric Oxide Synthase; Chain A, domain 1 › Nitric Oxide Synthase; Chain A, domain 1 0.70 38.0 3.20e-01 100.0% 31.4%
2x8aA02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.66 41.0 4.59e-01 71.6% 80.0%
4csrA00 1.10.20.10 Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A 0.61 43.0 4.65e-01 89.2% 85.2%
1eqzF00 1.10.20.10 Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A 0.60 46.0 4.57e-01 89.2% 76.6%
5y27A00 1.10.20.10 Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A 0.59 43.0 4.44e-01 89.2% 79.6%
1q9cA01 1.10.20.10 Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A 0.58 42.0 3.76e-01 76.5% 85.0%
2bykD00 1.10.20.10 Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A 0.57 44.0 4.65e-01 93.1% 91.3%
7ekoO01 1.10.1780.10 Mainly Alpha › Orthogonal Bundle › Double Clp-N motif › Clp, N-terminal domain 0.57 48.0 4.16e-01 91.2% 85.7%
4wzsB00 1.10.20.10 Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A 0.57 42.0 4.07e-01 93.1% 69.0%
1f1eA00 1.10.20.10 Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A 0.56 49.0 4.22e-01 92.2% 87.4%
6w6jD01 1.10.1780.10 Mainly Alpha › Orthogonal Bundle › Double Clp-N motif › Clp, N-terminal domain 0.56 47.0 4.34e-01 91.2% 88.5%
7tfmA01 1.10.1780.10 Mainly Alpha › Orthogonal Bundle › Double Clp-N motif › Clp, N-terminal domain 0.55 47.0 4.28e-01 93.1% 90.3%
1h3oB00 1.10.20.10 Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A 0.55 38.0 4.40e-01 86.3% 97.3%
2ly8A00 1.10.20.10 Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A 0.55 46.0 4.32e-01 90.2% 76.0%
6azyA01 1.10.1780.10 Mainly Alpha › Orthogonal Bundle › Double Clp-N motif › Clp, N-terminal domain 0.55 46.0 4.29e-01 93.1% 94.7%
3v9rA00 1.10.20.10 Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A 0.55 37.0 4.04e-01 88.2% 81.8%
4nftC00 1.10.20.10 Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A 0.55 48.0 3.95e-01 95.1% 88.8%
4csrB00 1.10.20.10 Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A 0.54 38.0 4.19e-01 86.3% 89.0%
1ywmA02 1.20.1270.150 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Surface Active Protein 0.54 37.0 4.10e-01 82.4% 94.7%
7egfc01 1.10.20.10 Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A 0.54 36.0 3.96e-01 87.3% 82.6%
6muwB00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.53 44.0 3.38e-01 100.0% 39.7%
4akfA01 3.40.1090.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytosolic phospholipase A2 catalytic domain › Cytosolic phospholipase A2 catalytic domain 0.53 46.0 3.26e-01 100.0% 71.8%
4hh5A00 1.10.1780.10 Mainly Alpha › Orthogonal Bundle › Double Clp-N motif › Clp, N-terminal domain 0.52 47.0 4.03e-01 100.0% 86.5%
3unbF00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.52 43.0 3.27e-01 100.0% 37.7%
4i5jA02 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.52 35.0 3.12e-01 90.2% 45.9%
4uqwB00 1.10.1780.10 Mainly Alpha › Orthogonal Bundle › Double Clp-N motif › Clp, N-terminal domain 0.52 47.0 4.06e-01 100.0% 89.8%
1y1aA02 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.52 35.0 3.74e-01 94.1% 81.6%
3b0bB00 1.10.20.10 Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A 0.51 38.0 3.94e-01 90.2% 83.5%
1kx5A00 1.10.20.10 Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A 0.50 35.0 3.20e-01 83.3% 54.1%
ECOD (88)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4943615 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.98 84.0 8.72e-01 100.0% 94.7%
4945383 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.97 80.0 7.99e-01 94.1% 82.9%
4943746 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.97 83.0 8.64e-01 100.0% 94.7%
4947246 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.96 83.0 8.20e-01 100.0% 85.7%
5080772 148.1.3.20 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_2 0.96 84.0 7.81e-01 100.0% 76.7%
4983617 148.1.3.20 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_2 0.95 83.0 7.79e-01 100.0% 76.7%
5029543 2004.1.1.155 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_3 0.95 89.0 5.91e-01 100.0% 30.2%
5024099 148.1.3.20 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_2 0.95 83.0 7.51e-01 100.0% 70.8%
4992654 148.1.3.20 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_2 0.95 83.0 8.12e-01 96.1% 85.2%
4063280 148.1.3.20 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_2 0.95 74.0 8.12e-01 99.0% 96.5%
3962695 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.94 83.0 5.75e-01 100.0% 32.6%
3952599 148.1.3.20 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_2 0.93 87.0 8.65e-01 100.0% 94.3%
5025644 148.1.3.20 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_2 0.92 65.0 7.35e-01 100.0% 92.5%
4997973 148.1.3.20 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_2 0.91 78.0 7.48e-01 99.0% 79.1%
1614409 148.1.3.20 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_2 0.91 87.0 8.54e-01 100.0% 93.6%
3960347 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.91 77.0 8.18e-01 91.2% 100.0%
4944899 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.90 67.0 7.34e-01 96.1% 92.9%
3972248 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.89 72.0 7.16e-01 94.1% 81.0%
4975172 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.89 58.0 6.14e-01 86.3% 74.4%
4997798 148.1.3.20 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_2 0.89 73.0 7.08e-01 95.1% 79.1%
3588988 148.1.3.20 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_2 0.89 76.0 7.89e-01 100.0% 95.8%
5019483 148.1.3.20 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_2 0.88 68.0 6.72e-01 100.0% 77.1%
2570230 148.1.3.20 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_2 0.87 68.0 7.22e-01 100.0% 91.2%
3285896 148.1.3.20 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_2 0.87 67.0 6.76e-01 100.0% 81.0%
3264031 148.1.3.20 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_2 0.87 72.0 7.04e-01 95.1% 80.0%
4997975 148.1.3.20 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_2 0.86 72.0 7.01e-01 96.1% 80.9%
3289135 148.1.3.315 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › DUF5682 0.86 61.0 7.06e-01 98.0% 100.0%
5004938 148.1.3.20 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_2 0.85 73.0 7.53e-01 96.1% 96.8%
5073394 148.1.3.20 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_2 0.84 65.0 6.91e-01 100.0% 91.1%
5046896 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.84 63.0 7.05e-01 99.0% 98.8%
5000867 148.1.3.20 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_2 0.84 74.0 6.64e-01 100.0% 70.4%
4122054 148.1.3.20 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_2 0.83 78.0 7.53e-01 100.0% 93.8%
5049406 148.1.3.20 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_2 0.83 66.0 6.88e-01 100.0% 89.5%
3838010 148.1.3.19 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 0.83 44.0 5.32e-01 70.6% 77.1%
52241 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.83 48.0 5.35e-01 86.3% 71.4%
3428 148.1.3.50 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Cdc6_lid 0.83 49.0 5.42e-01 90.2% 72.6%
4041830 148.1.3.20 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_2 0.83 49.0 6.04e-01 88.2% 93.8%
4201704 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.82 74.0 7.02e-01 93.1% 93.9%
3284850 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.82 61.0 6.82e-01 99.0% 98.8%
4934221 148.1.3.20 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_2 0.82 55.0 6.56e-01 71.6% 100.0%
3172016 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.81 78.0 6.41e-01 100.0% 77.6%
5050118 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.81 76.0 6.40e-01 100.0% 79.4%
5044875 148.1.3.20 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_2 0.81 75.0 6.05e-01 100.0% 68.6%
5000152 148.1.3.20 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_2 0.80 73.0 6.75e-01 97.1% 96.8%
4971995 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.80 63.0 6.71e-01 100.0% 93.3%
3724404 148.1.3.20 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_2 0.80 76.0 7.00e-01 100.0% 86.4%
4623181 148.1.3.20 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_2 0.80 54.0 6.18e-01 97.1% 93.3%
5049997 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.79 56.0 4.80e-01 100.0% 47.7%
5039661 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.78 69.0 6.45e-01 100.0% 77.6%
3196942 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.78 73.0 6.84e-01 100.0% 88.6%
3076071 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.78 48.0 4.93e-01 84.3% 64.0%
4980996 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.77 42.0 3.11e-01 71.6% 22.4%
4939813 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.77 71.0 6.15e-01 100.0% 67.3%
3475867 148.1.3.17 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid 0.77 51.0 5.86e-01 74.5% 92.0%
3318092 148.1.3.19 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 0.77 41.0 4.77e-01 70.6% 72.0%
4666971 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.76 41.0 4.77e-01 70.6% 72.0%
5028412 148.1.3.20 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_2 0.76 70.0 5.93e-01 100.0% 69.7%
4929924 148.1.3.19 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 0.75 43.0 4.70e-01 85.3% 68.2%
3619127 148.1.3.19 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 0.75 41.0 4.53e-01 70.6% 65.9%
3575738 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.74 43.0 4.14e-01 73.5% 51.3%
3232045 148.1.3.19 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 0.73 46.0 4.94e-01 81.4% 73.9%
5078781 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.73 50.0 5.33e-01 86.3% 80.0%
4024278 148.1.3.17 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid 0.72 56.0 5.84e-01 99.0% 88.4%
4946868 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.72 43.0 4.67e-01 84.3% 70.6%
3605789 148.1.3.19 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 0.72 46.0 5.08e-01 83.3% 79.5%
4981858 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.72 50.0 5.02e-01 79.4% 69.5%
3630661 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.71 43.0 4.77e-01 84.3% 76.2%
1871534 148.1.3.19 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 0.71 43.0 4.28e-01 73.5% 57.9%
5013995 148.1.3.17 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid 0.71 52.0 5.65e-01 85.3% 91.8%
3442812 148.1.3.19 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 0.71 45.0 4.94e-01 83.3% 77.6%
3877790 148.1.3.19 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 0.70 46.0 5.03e-01 78.4% 80.7%
4790043 2004.1.1.820 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM_lid 0.70 49.0 4.60e-01 86.3% 59.2%
3520608 148.1.3.19 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 0.70 43.0 4.67e-01 83.3% 74.1%
4964866 148.1.3.404 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › PrkA 0.69 64.0 5.41e-01 100.0% 79.4%
3583412 148.1.3.17 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid 0.69 51.0 4.90e-01 84.3% 68.7%
3499861 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.68 44.0 4.39e-01 76.5% 62.9%
3610034 148.1.3.19 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 0.67 42.0 4.52e-01 73.5% 73.0%
5030441 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.66 41.0 4.49e-01 79.4% 75.3%
4395479 148.1.3.19 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 0.65 45.0 4.69e-01 78.4% 75.8%
4020947 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.62 43.0 4.59e-01 79.4% 82.0%
4989650 148.1.3.19 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 0.62 42.0 4.48e-01 74.5% 78.9%
3201487 148.1.1.5 alpha arrays › Histone-like › Histone-related › Histone › TFIID-18kDa 0.61 42.0 4.61e-01 89.2% 84.7%
3396348 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.60 55.0 5.34e-01 99.0% 93.6%
3784529 148.1.1.5 alpha arrays › Histone-like › Histone-related › Histone › TFIID-18kDa 0.59 42.0 4.45e-01 89.2% 83.3%
3934688 148.1.1.9 alpha arrays › Histone-like › Histone-related › Histone › TFIID_20kDa 0.58 41.0 4.77e-01 91.2% 100.0%
4466239 148.1.1.9 alpha arrays › Histone-like › Histone-related › Histone › TFIID_20kDa 0.55 37.0 4.43e-01 83.3% 100.0%
3836893 148.1.1.12 alpha arrays › Histone-like › Histone-related › Histone › Bromo_TP 0.55 39.0 4.38e-01 92.2% 93.8%
4013688 148.1.1.0 alpha arrays › Histone-like › Histone-related › Histone 0.52 39.0 4.39e-01 87.3% 100.0%
D2 medium residues 14-81_188-232
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3nbxX01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.84 78.0 6.24e-01 99.1% 100.0%
8ctsB01 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.75 47.0 5.33e-01 100.0% 82.8%
2nnwA02 1.10.287.4070 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.52 44.0 4.28e-01 100.0% 81.9%
2v1xA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 42.0 3.38e-01 86.7% 65.0%
2xblD00 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.51 36.0 3.06e-01 71.7% 86.2%
ECOD (21)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4937763 2004.1.1.155 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_3 0.97 93.0 7.11e-01 99.1% 96.9%
5029543 2004.1.1.155 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_3 0.96 93.0 6.35e-01 100.0% 67.4%
4943614 2004.1.1.155 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_3 0.94 90.0 6.99e-01 99.1% 100.0%
3284346 2004.1.1.155 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_3 0.91 86.0 6.64e-01 99.1% 97.3%
3972249 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.90 67.0 5.43e-01 76.1% 100.0%
5011083 2004.1.1.223 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › bpMoxR 0.90 86.0 6.07e-01 100.0% 73.0%
1614408 2004.1.1.155 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_3 0.89 82.0 6.38e-01 97.3% 96.8%
4324606 2004.1.1.155 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_3 0.89 83.0 6.35e-01 98.2% 97.0%
5000866 2004.1.1.156 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 0.88 84.0 6.43e-01 100.0% 98.7%
4992064 2004.1.1.223 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › bpMoxR 0.88 80.0 5.71e-01 95.6% 71.5%
4271043 2004.1.1.223 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › bpMoxR 0.85 78.0 6.13e-01 98.2% 99.5%
None 0.85 76.0 6.03e-01 95.6% 100.0%
5004937 2004.1.1.156 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 0.84 78.0 5.92e-01 98.2% 99.6%
4941372 5054.1.1.0 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels 0.68 44.0 5.01e-01 100.0% 87.1%
3834208 2004.5.1.3 a/b three-layered sandwiches › P-loop domains-like › Differentially expressed in normal cells and neoplasia (DENN) domain › Differentially expressed in normal cells and neoplasia (DENN) domain › DENN 0.63 49.0 3.87e-01 83.2% 85.4%
3432084 2004.5.1.1 a/b three-layered sandwiches › P-loop domains-like › Differentially expressed in normal cells and neoplasia (DENN) domain › Differentially expressed in normal cells and neoplasia (DENN) domain › DENN,dDENN 0.62 49.0 3.85e-01 85.0% 85.0%
3330955 2004.5.1.3 a/b three-layered sandwiches › P-loop domains-like › Differentially expressed in normal cells and neoplasia (DENN) domain › Differentially expressed in normal cells and neoplasia (DENN) domain › DENN 0.61 48.0 3.78e-01 85.8% 83.5%
4948156 2004.5.1.0 a/b three-layered sandwiches › P-loop domains-like › Differentially expressed in normal cells and neoplasia (DENN) domain › Differentially expressed in normal cells and neoplasia (DENN) domain 0.55 44.0 3.49e-01 86.7% 96.7%
5053157 2004.5.1.0 a/b three-layered sandwiches › P-loop domains-like › Differentially expressed in normal cells and neoplasia (DENN) domain › Differentially expressed in normal cells and neoplasia (DENN) domain 0.54 43.0 3.27e-01 85.8% 97.1%
3622963 2004.1.1.30 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.51 38.0 2.72e-01 100.0% 25.2%
4013735 2004.1.1.30 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.51 38.0 2.65e-01 77.9% 55.0%
D3 medium residues 82-187
PDB
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF07726.18 best AAA_3 167.1 2.50e-49 100.0% 78.6%
PF07728.21 AAA_5 32.1 1.50e-07 98.1% 78.4%
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2r44A02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.87 81.0 6.76e-01 100.0% 61.7%
3nbxX01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.81 68.0 5.32e-01 100.0% 45.0%
3f8tA03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.79 74.0 5.19e-01 100.0% 36.0%
2bjvA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.76 68.0 5.81e-01 100.0% 62.9%
3ja8204 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.74 70.0 4.74e-01 100.0% 33.5%
2py5A05 4.10.80.20 Few Secondary Structures › Irregular › Rhinovirus 14, subunit 4 › DNA polymerase; domain 5 0.63 21.0 3.42e-01 83.0% 93.3%
4r7zA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.61 57.0 3.96e-01 100.0% 34.5%
7vufD01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 42.0 3.36e-01 100.0% 40.2%
3gw6A03 3.30.2460.10 Alpha Beta › 2-Layer Sandwich › Endo-n-acetylneuraminidase fold › Endo-n-acetylneuraminidase domain 0.54 21.0 2.88e-01 80.2% 66.7%
4lyaA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 48.0 3.45e-01 100.0% 43.4%
1c7uA01 3.40.1810.10 Alpha Beta › 3-Layer(aba) Sandwich › SRF-like › Transcription factor, MADS-box 0.50 24.0 2.91e-01 96.2% 66.7%
3bwxA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.50 45.0 3.32e-01 100.0% 77.9%
ECOD (63)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3284346 2004.1.1.155 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_3 0.97 92.0 6.86e-01 100.0% 45.8%
3962695 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.97 92.0 6.38e-01 100.0% 36.1%
4943614 2004.1.1.155 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_3 0.96 90.0 6.82e-01 100.0% 47.9%
4937763 2004.1.1.155 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_3 0.96 89.0 6.65e-01 100.0% 45.3%
3972249 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.94 88.0 6.97e-01 100.0% 54.2%
4552869 2004.1.1.2 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.91 87.0 6.60e-01 100.0% 58.6%
5053049 2004.1.1.156 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 0.90 87.0 6.95e-01 100.0% 61.1%
5036693 2004.1.1.156 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 0.89 86.0 6.88e-01 100.0% 61.1%
5051024 2004.1.1.155 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_3 0.89 85.0 6.93e-01 100.0% 62.8%
5044874 2004.1.1.156 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 0.89 83.0 6.10e-01 100.0% 41.6%
5028411 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.89 83.0 5.92e-01 100.0% 38.1%
5029543 2004.1.1.155 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_3 0.89 82.0 5.59e-01 100.0% 31.7%
4943502 2004.1.1.156 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 0.89 85.0 6.81e-01 100.0% 61.1%
5004937 2004.1.1.156 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 0.88 82.0 6.16e-01 100.0% 50.4%
5000866 2004.1.1.156 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 0.88 80.0 5.99e-01 100.0% 43.9%
1614408 2004.1.1.155 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_3 0.87 81.0 6.14e-01 100.0% 46.6%
3291643 2004.1.1.156 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 0.87 83.0 6.22e-01 100.0% 50.0%
3944790 2004.1.1.156 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 0.87 82.0 6.65e-01 100.0% 63.8%
4939812 2004.1.1.156 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 0.86 81.0 6.00e-01 100.0% 45.7%
3398771 2004.1.1.156 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 0.85 80.0 5.93e-01 100.0% 53.5%
4927696 2004.1.1.22 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Sigma54_activat 0.84 80.0 5.31e-01 100.0% 31.0%
5016962 2004.1.1.46 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM 0.84 80.0 5.87e-01 100.0% 46.8%
4318504 2004.1.1.156 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 0.84 79.0 6.60e-01 100.0% 66.5%
None 0.83 80.0 5.33e-01 100.0% 32.9%
5018184 2004.1.1.156 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 0.83 78.0 6.30e-01 100.0% 57.4%
4986203 2004.1.1.156 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 0.83 77.0 5.65e-01 100.0% 41.2%
3695173 2004.1.1.46 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM 0.83 80.0 5.52e-01 100.0% 38.3%
4013468 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.83 80.0 5.65e-01 100.0% 41.8%
3958312 2004.1.1.22 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Sigma54_activat 0.83 79.0 5.72e-01 100.0% 43.9%
3255516 2004.1.1.46 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM 0.83 79.0 5.55e-01 100.0% 40.0%
None 0.83 79.0 5.22e-01 100.0% 31.9%
3594046 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.82 78.0 5.67e-01 100.0% 44.2%
3476274 2004.1.1.418 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM, Mg_chelatase 0.82 78.0 5.58e-01 100.0% 41.8%
4078827 2004.1.1.418 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM, Mg_chelatase 0.82 78.0 5.45e-01 100.0% 38.3%
None 0.82 78.0 4.89e-01 100.0% 23.7%
None 0.82 78.0 5.58e-01 100.0% 42.6%
4017535 2004.1.1.418 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM, Mg_chelatase 0.81 77.0 5.32e-01 100.0% 36.5%
3550992 2004.1.1.418 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM, Mg_chelatase 0.81 77.0 5.57e-01 100.0% 43.0%
5039660 2004.1.1.22 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Sigma54_activat 0.81 77.0 5.40e-01 100.0% 36.9%
4030223 2004.1.1.418 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM, Mg_chelatase 0.81 77.0 5.52e-01 100.0% 42.6%
4958529 2004.1.1.156 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 0.81 75.0 6.13e-01 100.0% 62.2%
4324606 2004.1.1.155 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_3 0.80 77.0 5.75e-01 100.0% 46.1%
3290062 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.80 74.0 5.28e-01 100.0% 44.0%
5011083 2004.1.1.223 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › bpMoxR 0.78 71.0 4.99e-01 100.0% 34.0%
4992064 2004.1.1.223 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › bpMoxR 0.78 71.0 5.00e-01 100.0% 34.6%
None 0.77 71.0 5.52e-01 100.0% 48.4%
4271043 2004.1.1.223 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › bpMoxR 0.77 71.0 5.46e-01 100.0% 47.3%
3604664 2004.1.1.223 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › bpMoxR 0.77 70.0 5.52e-01 100.0% 50.2%
4997972 2004.1.1.155 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_3 0.76 71.0 5.41e-01 100.0% 49.3%
4931164 2004.1.1.156 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 0.74 66.0 4.97e-01 100.0% 41.6%
3274543 2004.1.1.155 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_3 0.74 70.0 5.46e-01 100.0% 75.8%
3693345 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.73 68.0 4.91e-01 100.0% 49.5%
3632069 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.72 67.0 5.14e-01 100.0% 47.7%
3718987 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.71 66.0 5.25e-01 100.0% 53.3%
1447875 2004.1.1.181 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_7 0.71 66.0 5.36e-01 100.0% 60.4%
3196943 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.70 56.0 4.72e-01 84.0% 70.0%
4031073 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.70 64.0 5.33e-01 100.0% 68.9%
4016634 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.70 66.0 4.94e-01 100.0% 51.3%
3231765 64.1.1.19 beta meanders › WW domain-like › WW domain › WW domain › FBA_2 0.55 40.0 3.91e-01 100.0% 67.5%
1495254 2004.1.1.63 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › FtsK_SpoIIIE 0.52 48.0 3.49e-01 100.0% 45.3%
3261509 109.4.1.890 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HAT_Syf1_CNRKL1_C 0.51 39.0 2.39e-01 82.1% 22.0%
3190533 109.4.1.3564 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HAT_Syf1_CNRKL1_C, HAT_PRP39_N, HAT_PRP39_C 0.50 38.0 2.54e-01 81.1% 31.8%
None 0.50 38.0 2.58e-01 80.2% 85.4%