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LSDeep1_scaffold_42_prodigal-single.1__X__X__00004

Bact-Vir

LSDeep1_scaffold_42_prodigal-single.1__X__X__00004

Identity

Kingdom:
phage

Quality

77.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 14-73
PDB
Domain cluster: representative
CATH (56)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3qv0A00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.79 59.0 4.13e-01 80.0% 27.4%
5egjA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.73 50.0 3.62e-01 71.7% 51.5%
4icwA00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.69 53.0 4.15e-01 83.3% 86.9%
6x05A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.69 55.0 3.35e-01 88.3% 28.4%
1hq0A00 3.60.100.10 Alpha Beta › 4-Layer Sandwich › Cytotoxic necrotizing factor 1 (CNF1) › Cytotoxic necrotizing factor, Rho-activating domain 0.67 45.0 2.89e-01 70.0% 17.3%
6bm0A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.67 53.0 3.30e-01 90.0% 32.2%
1d5rA02 2.60.40.1110 Mainly Beta › Sandwich › Immunoglobulin-like › 0.65 49.0 3.88e-01 83.3% 86.5%
4r03A00 2.40.128.720 Mainly Beta › Beta Barrel › Lipocalin › 0.64 47.0 3.93e-01 80.0% 44.0%
1w96C04 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.64 51.0 3.34e-01 88.3% 83.6%
4ikbA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.64 50.0 3.91e-01 86.7% 77.5%
4ienA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.63 46.0 3.40e-01 76.7% 34.4%
3n8bA00 3.10.450.700 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.63 49.0 4.58e-01 86.7% 77.3%
3wuhB01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.63 48.0 3.54e-01 86.7% 53.7%
4n2cA02 2.60.40.1700 Mainly Beta › Sandwich › Immunoglobulin-like › Protein-arginine deiminase, central domain 0.63 45.0 3.23e-01 76.7% 94.2%
6oziB00 3.30.2170.10 Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily 0.62 49.0 3.33e-01 86.7% 41.5%
4g7nA01 3.30.1120.120 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.62 44.0 3.52e-01 75.0% 76.0%
2qkdA01 2.20.25.420 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain 0.62 42.0 4.57e-01 70.0% 89.6%
4dkwA00 3.30.420.280 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 0.61 46.0 3.34e-01 85.0% 45.9%
2w02B02 2.30.30.1240 Mainly Beta › Roll › SH3 type barrels. › AscD, thumb domain, four stranded beta-sheet 0.61 43.0 4.13e-01 73.3% 73.5%
2hqsA01 3.40.50.10070 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TolB, N-terminal domain 0.61 45.0 3.46e-01 80.0% 47.9%
7essA01 3.30.420.140 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › YqgF/RNase H-like domain 0.61 44.0 3.46e-01 78.3% 58.3%
4nspA00 3.30.2170.10 Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily 0.61 48.0 3.24e-01 86.7% 41.2%
2w35A00 3.30.2170.10 Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily 0.61 49.0 3.39e-01 91.7% 83.0%
5c0pA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.59 44.0 2.81e-01 80.0% 21.1%
4htgA03 3.30.160.40 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain 0.59 44.0 4.06e-01 81.7% 68.4%
1a7tA00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.58 42.0 2.81e-01 76.7% 37.4%
3q9oA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.58 49.0 3.40e-01 96.7% 36.6%
4gnxB00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.58 45.0 3.77e-01 93.3% 96.7%
1mu5A01 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.58 47.0 3.35e-01 96.7% 75.2%
6n9aB02 3.30.420.200 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 0.58 42.0 4.08e-01 81.7% 68.1%
2ltjA00 2.20.230.10 Mainly Beta › Single Sheet › Resuscitation-promoting factor rpfb fold › Resuscitation-promoting factor rpfb. 0.58 38.0 3.25e-01 70.0% 59.5%
3gldA01 2.60.40.3050 Mainly Beta › Sandwich › Immunoglobulin-like › 0.58 43.0 3.23e-01 78.3% 88.8%
1okjA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.58 44.0 3.85e-01 83.3% 74.7%
1na8B00 2.60.40.1230 Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain 0.57 43.0 3.34e-01 83.3% 73.1%
3bbjA00 2.40.160.210 Mainly Beta › Beta Barrel › Porin › Acyl-CoA thioesterase, double hotdog domain 0.57 43.0 2.81e-01 80.0% 85.4%
1v89A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 46.0 3.85e-01 98.3% 64.4%
3hrgA01 3.30.420.250 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Protein of unknown function DUF3822, N-terminal domain 0.56 44.0 3.39e-01 88.3% 88.1%
2fwrA01 3.40.1170.30 Alpha Beta › 3-Layer(aba) Sandwich › MutS, DNA mismatch repair protein, domain I › 0.56 42.0 4.33e-01 85.0% 87.7%
3l4gC04 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.56 40.0 2.71e-01 81.7% 81.8%
8adlB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 43.0 2.80e-01 90.0% 45.6%
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.55 40.0 3.94e-01 85.0% 71.4%
2qm4A01 2.170.210.10 Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › DNA double-strand break repair and VJ recombination XRCC4, N-terminal 0.55 43.0 3.25e-01 85.0% 70.6%
1vhzA01 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.55 40.0 3.03e-01 85.0% 66.9%
6r3wA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 43.0 3.29e-01 93.3% 77.6%
1wuoA00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.54 43.0 2.90e-01 85.0% 40.6%
3ia8A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 42.0 3.20e-01 88.3% 74.1%
3cygA01 3.30.565.40 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Fervidobacterium nodosum Rt17-B1 like 0.53 36.0 2.98e-01 71.7% 60.5%
2ch9A01 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 38.0 3.27e-01 81.7% 59.3%
3bm4A00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.52 37.0 2.66e-01 85.0% 23.4%
8jx6A02 2.30.30.780 Mainly Beta › Roll › SH3 type barrels. › 0.52 38.0 3.27e-01 80.0% 55.3%
1gyvA00 2.60.40.1230 Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain 0.52 39.0 3.23e-01 85.0% 84.2%
3dsbA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.52 35.0 3.11e-01 73.3% 62.4%
4pibA00 2.60.40.3910 Mainly Beta › Sandwich › Immunoglobulin-like › Inclusion body protein 0.51 36.0 2.77e-01 78.3% 86.8%
4o8sA01 3.10.450.620 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › JHP933, nucleotidyltransferase-like core domain 0.51 37.0 2.96e-01 76.7% 77.6%
4c92C00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.51 37.0 3.44e-01 78.3% 64.6%
1gm5A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 41.0 3.61e-01 98.3% 91.2%
ECOD (77)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4938611 295.1.1.53 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › DUF3467 0.81 62.0 6.10e-01 85.0% 78.1%
3716329 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.78 62.0 4.49e-01 86.7% 35.2%
3882925 11.1.6.5 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › UPA domain › UPA-FIIND 0.74 52.0 3.90e-01 73.3% 96.4%
3501513 391.1.1.0 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module 0.73 43.0 3.59e-01 70.0% 36.4%
3457141 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.72 59.0 3.66e-01 88.3% 49.1%
3927366 2484.1.1.4 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_H 0.72 56.0 4.22e-01 86.7% 80.0%
3396837 295.1.1.4 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › COMM_domain 0.72 58.0 5.57e-01 91.7% 97.1%
5030390 4312.1.1.0 a+b two layers › RelE-like › RelE-like › RelE-like 0.72 49.0 4.32e-01 76.7% 48.3%
3526966 11.2.1.79 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › CTSRT 0.71 54.0 4.12e-01 83.3% 82.1%
3940017 5.1.3.6 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 0.70 57.0 3.68e-01 90.0% 49.7%
3684135 5.1.3.67 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.70 57.0 3.55e-01 88.3% 43.9%
3259640 222.1.1.0 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase 0.70 49.0 4.12e-01 73.3% 77.0%
3411385 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.70 58.0 4.09e-01 91.7% 58.9%
3629780 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.70 56.0 3.41e-01 86.7% 50.3%
3338367 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.70 54.0 4.12e-01 83.3% 85.2%
4940436 3414.1.1.0 beta sandwiches › A putative surface protein › A putative surface protein › A putative surface protein 0.68 43.0 3.75e-01 70.0% 43.3%
3236951 243.3.1.35 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF229 0.68 47.0 3.48e-01 73.3% 66.9%
3484051 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.67 55.0 3.41e-01 91.7% 27.0%
3349675 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.67 50.0 3.88e-01 81.7% 82.9%
3932155 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.67 54.0 3.55e-01 91.7% 35.6%
3653968 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.66 53.0 3.26e-01 88.3% 35.4%
3843423 2484.5.1.3 mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH_2 0.65 52.0 4.10e-01 90.0% 84.6%
4572085 7503.1.1.3 a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › TolB_N 0.65 48.0 3.78e-01 81.7% 39.2%
3927742 5.1.3.117 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1+Kelch_KLHDC2_KLHL20_DRC7 0.64 51.0 3.32e-01 88.3% 52.8%
5030539 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.64 50.0 4.38e-01 85.0% 82.2%
3561019 2484.5.1.3 mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH_2 0.63 50.0 3.99e-01 90.0% 84.6%
4974067 300.1.1.0 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease 0.63 44.0 3.31e-01 73.3% 31.6%
3415319 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.63 52.0 3.67e-01 93.3% 65.9%
3670829 5.1.3.144 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › b-prop_At3g26010-like 0.63 50.0 3.14e-01 88.3% 36.1%
3898844 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.63 53.0 3.71e-01 93.3% 67.5%
3598341 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.62 49.0 3.13e-01 88.3% 31.6%
3797604 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.62 48.0 3.07e-01 88.3% 39.7%
3892544 5.1.3.6 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 0.62 51.0 3.22e-01 90.0% 84.6%
3527733 10.1.1.35 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 0.61 51.0 3.58e-01 93.3% 67.0%
3170704 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.61 47.0 2.86e-01 85.0% 34.6%
185684 2484.1.1.77 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Terminase_6C 0.61 46.0 3.34e-01 85.0% 45.9%
3929202 2484.5.1.3 mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH_2 0.61 48.0 4.10e-01 90.0% 82.9%
2623870 2484.1.1.44 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pox_A22 0.61 47.0 3.59e-01 86.7% 55.0%
3472467 284.1.3.0 a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain 0.60 48.0 4.51e-01 88.3% 93.3%
3845979 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.59 47.0 3.87e-01 93.3% 89.6%
4370534 5.1.3.136 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DPPIV_N, PD40 0.59 45.0 2.81e-01 86.7% 23.4%
4187143 7503.1.1.3 a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › TolB_N 0.59 43.0 3.37e-01 80.0% 37.8%
4305762 7503.1.1.0 a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain 0.59 42.0 3.22e-01 81.7% 32.9%
4623130 7503.1.1.18 a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › PF30449 0.58 44.0 3.48e-01 83.3% 49.6%
4028885 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.58 41.0 4.05e-01 85.0% 69.2%
4545906 7503.1.1.3 a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › TolB_N 0.58 45.0 3.41e-01 85.0% 35.7%
3688114 5.1.4.100 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Med16_N 0.58 44.0 2.65e-01 86.7% 42.0%
3401054 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 41.0 3.71e-01 76.7% 98.8%
4639186 7503.1.1.3 a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › TolB_N 0.57 44.0 3.20e-01 81.7% 31.2%
3994778 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 50.0 3.86e-01 100.0% 44.6%
4496364 7503.1.1.3 a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › TolB_N 0.57 40.0 3.16e-01 78.3% 32.1%
5023443 330.4.1.0 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 0.57 42.0 4.10e-01 78.3% 76.9%
3605586 5.1.3.4 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › WD40 0.57 43.0 2.70e-01 86.7% 35.4%
4957146 225.1.1.3 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c 0.57 43.0 2.97e-01 83.3% 34.7%
4057405 7503.1.1.3 a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › TolB_N 0.57 41.0 3.30e-01 80.0% 36.3%
4078209 7503.1.1.3 a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › TolB_N 0.56 41.0 3.14e-01 80.0% 31.7%
4642685 7503.1.1.3 a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › TolB_N 0.56 43.0 3.43e-01 85.0% 40.0%
4298591 7503.1.1.3 a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › TolB_N 0.56 44.0 3.33e-01 86.7% 89.7%
3723171 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 48.0 3.67e-01 100.0% 42.7%
5044471 225.1.1.3 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c 0.55 43.0 2.96e-01 88.3% 35.7%
3175573 7504.1.1.5 a/b three-layered sandwiches › ITPase-like › ITPase-like › ITPase-like › DUF5427 0.55 41.0 2.99e-01 85.0% 75.0%
4351491 7503.1.1.3 a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › TolB_N 0.55 42.0 3.28e-01 85.0% 43.6%
3633078 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.55 47.0 3.78e-01 100.0% 50.4%
4942494 225.1.1.3 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c 0.55 44.0 3.08e-01 96.7% 66.3%
3717255 4096.1.1.1 a+b two layers › NAP-like › NAP-like › NAP-like › NAP 0.55 44.0 2.97e-01 96.7% 54.7%
3802939 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 38.0 2.82e-01 75.0% 96.4%
3269121 220.1.1.20 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_TFIIH 0.54 47.0 3.91e-01 100.0% 59.1%
4588045 7503.1.1.3 a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › TolB_N 0.53 42.0 3.14e-01 85.0% 37.6%
3497120 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.53 43.0 3.67e-01 88.3% 64.2%
3405306 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.52 42.0 3.51e-01 91.7% 53.9%
3738978 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 44.0 3.48e-01 100.0% 46.4%
1308581 327.11.2.7 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_10,KH-I_CeGLD3_rpt3 0.52 39.0 3.12e-01 81.7% 76.4%
3934156 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 41.0 3.47e-01 95.0% 53.0%
4623221 2003.1.2.15 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.51 42.0 2.83e-01 100.0% 32.1%
5050916 300.1.1.0 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease 0.51 35.0 2.70e-01 73.3% 32.7%
4476436 225.1.1.3 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c 0.51 43.0 3.01e-01 100.0% 82.2%
5043777 225.1.1.7 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c_3 0.50 40.0 2.91e-01 100.0% 80.0%