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LSDeep1_scaffold_42_prodigal-single.1__X__X__00071
Bact-VirLSDeep1_scaffold_42_prodigal-single.1__X__X__00071
Identity
- Kingdom:
- phage
Quality
86.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-77
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3m9qA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 44.0 | 4.54e-01 | 100.0% | 84.7% |
| 1vclA01 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.60 | 48.0 | 3.91e-01 | 89.5% | 96.0% |
| 3kxtA00 | 2.30.30.610 | Mainly Beta › Roll › SH3 type barrels. › Chromatin protein Cren7 | 0.59 | 40.0 | 4.37e-01 | 97.4% | 94.6% |
| 6vilA01 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.58 | 49.0 | 3.95e-01 | 100.0% | 48.3% |
| 2l89A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 41.0 | 3.72e-01 | 100.0% | 52.8% |
| 1y0gA00 | 2.40.128.110 | Mainly Beta › Beta Barrel › Lipocalin › Lipid/polyisoprenoid-binding, YceI-like | 0.58 | 43.0 | 3.43e-01 | 82.9% | 98.2% |
| 3upuA03 | 2.30.30.780 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 49.0 | 4.13e-01 | 98.7% | 93.1% |
| 7cceA01 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.56 | 48.0 | 3.91e-01 | 100.0% | 49.0% |
| 4bb7B00 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.55 | 46.0 | 3.28e-01 | 100.0% | 30.3% |
| 4ft4B01 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.55 | 49.0 | 3.92e-01 | 100.0% | 51.3% |
| 2z17A00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.54 | 41.0 | 3.86e-01 | 82.9% | 88.3% |
| 2kcjA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.50 | 41.0 | 3.77e-01 | 96.1% | 88.9% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3907176 | 4.1.1.248 ↗ | beta barrels › SH3 › SH3 › SH3 › CABIT | 0.77 | 58.0 | 5.51e-01 | 100.0% | 67.8% |
| 5029166 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 57.0 | 5.80e-01 | 100.0% | 85.1% |
| 3937006 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 58.0 | 5.84e-01 | 100.0% | 84.6% |
| 3580428 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 46.0 | 5.02e-01 | 71.1% | 100.0% |
| 3798523 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.63 | 55.0 | 5.41e-01 | 100.0% | 90.0% |
| 3530890 | 2004.1.1.402 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CABIT | 0.60 | 52.0 | 4.95e-01 | 100.0% | 81.8% |
| 2410381 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.60 | 44.0 | 4.43e-01 | 100.0% | 75.9% |
| 3848483 | 4.1.1.248 ↗ | beta barrels › SH3 › SH3 › SH3 › CABIT | 0.60 | 53.0 | 4.88e-01 | 100.0% | 76.5% |
| 3614906 | 4.26.1.8 ↗ | beta barrels › SH3 › Chromatin protein Cren7 › Chromatin protein Cren7 › Saf4_Yju2 | 0.57 | 42.0 | 4.33e-01 | 92.1% | 84.3% |
| 4501781 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 50.0 | 4.64e-01 | 100.0% | 78.0% |
| 4255495 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.55 | 44.0 | 3.07e-01 | 86.8% | 54.0% |
| 4262943 | 220.1.1.184 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_S11IP | 0.55 | 45.0 | 3.94e-01 | 96.1% | 83.2% |
| 3898198 | 220.1.1.184 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_S11IP | 0.54 | 46.0 | 3.97e-01 | 97.4% | 85.6% |
| 3931053 | 4.25.1.2 ↗ | beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain › BRWD_AD | 0.54 | 47.0 | 4.37e-01 | 100.0% | 88.0% |
| 3999482 | 4.1.1.311 ↗ | beta barrels › SH3 › SH3 › SH3 › BRWD_AD | 0.53 | 46.0 | 4.14e-01 | 100.0% | 77.3% |
| 3631731 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 46.0 | 3.72e-01 | 100.0% | 53.3% |
| 3208838 | 4.1.1.20 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH | 0.51 | 46.0 | 3.64e-01 | 100.0% | 51.6% |
| 4960051 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.51 | 44.0 | 3.38e-01 | 94.7% | 47.1% |
| 3900186 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.51 | 38.0 | 3.50e-01 | 84.2% | 72.7% |
| 3934023 | 3343.1.1.1 ↗ | alpha complex topology › gamma-tubulin complex protein 4 (GCP4) › gamma-tubulin complex protein 4 (GCP4) › gamma-tubulin complex protein 4 (GCP4) › GCP_C_terminal | 0.50 | 36.0 | 2.17e-01 | 77.6% | 32.2% |