←Back to structures
LSDeep1_scaffold_42_prodigal-single.1__X__X__00089
Bact-VirLSDeep1_scaffold_42_prodigal-single.1__X__X__00089
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-147
Domain cluster:
rep: OP172755.1__WAX11389.1__CB473P1_00102__00102__D3-159
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03235.20 best | GmrSD_N | 63.8 | 3.40e-17 | 96.4% | 55.0% |
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1vz0A01 | 3.90.1530.30 | Alpha Beta › Alpha-Beta Complex › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain › | 0.73 | 33.0 | 4.80e-01 | 73.4% | 95.2% |
| 1xw3A01 | 3.90.1530.10 | Alpha Beta › Alpha-Beta Complex › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain | 0.71 | 46.0 | 5.38e-01 | 95.7% | 93.8% |
| 1aj6A00 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.50 | 35.0 | 3.22e-01 | 72.7% | 67.5% |
ECOD (34)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5018770 | 876.1.1.4 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › DUF262 | 0.91 | 69.0 | 7.35e-01 | 99.3% | 87.2% |
| 5030163 | 876.1.1.4 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › DUF262 | 0.89 | 70.0 | 7.78e-01 | 99.3% | 100.0% |
| 5081788 | 876.1.1.4 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › DUF262 | 0.89 | 66.0 | 7.45e-01 | 98.6% | 96.4% |
| 4964225 | 876.1.1.4 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › DUF262 | 0.87 | 82.0 | 7.94e-01 | 98.6% | 98.7% |
| 5075504 | 876.1.1.4 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › DUF262 | 0.86 | 55.0 | 6.80e-01 | 94.2% | 100.0% |
| 3386516 | 876.1.1.4 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › DUF262 | 0.84 | 81.0 | 6.47e-01 | 100.0% | 98.0% |
| 3945776 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.79 | 52.0 | 6.13e-01 | 100.0% | 96.8% |
| 5073612 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.78 | 52.0 | 5.93e-01 | 100.0% | 89.5% |
| 3587492 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.78 | 46.0 | 5.32e-01 | 92.8% | 81.0% |
| 4946472 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.77 | 44.0 | 5.71e-01 | 87.1% | 98.8% |
| 3278076 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.77 | 49.0 | 5.97e-01 | 95.7% | 98.9% |
| 2841795 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.77 | 47.0 | 5.75e-01 | 96.4% | 95.6% |
| 3971842 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.76 | 47.0 | 4.91e-01 | 93.5% | 66.2% |
| 3942579 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.76 | 41.0 | 5.41e-01 | 84.2% | 97.3% |
| 3948471 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.76 | 52.0 | 5.69e-01 | 100.0% | 85.2% |
| 4862436 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.74 | 50.0 | 5.90e-01 | 100.0% | 100.0% |
| 4929132 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.73 | 49.0 | 5.88e-01 | 98.6% | 100.0% |
| 2710114 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.73 | 43.0 | 5.10e-01 | 93.5% | 86.0% |
| 3772471 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.73 | 45.0 | 5.54e-01 | 92.1% | 96.7% |
| 5083282 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.72 | 50.0 | 5.73e-01 | 100.0% | 98.0% |
| 2387795 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.71 | 43.0 | 5.30e-01 | 97.8% | 96.6% |
| 85732 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.71 | 45.0 | 4.86e-01 | 95.7% | 74.4% |
| 3992892 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.69 | 40.0 | 5.04e-01 | 93.5% | 97.5% |
| 3506049 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.68 | 39.0 | 4.24e-01 | 90.6% | 67.0% |
| 5049279 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.68 | 47.0 | 5.50e-01 | 97.1% | 99.0% |
| 3247083 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.68 | 40.0 | 4.34e-01 | 95.0% | 68.3% |
| 3701649 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.67 | 46.0 | 5.23e-01 | 95.0% | 97.0% |
| 4393138 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.66 | 52.0 | 5.55e-01 | 100.0% | 95.0% |
| 4370861 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.66 | 50.0 | 5.48e-01 | 100.0% | 99.1% |
| 5073795 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.63 | 52.0 | 5.52e-01 | 97.8% | 98.4% |
| 5050551 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.55 | 48.0 | 4.69e-01 | 92.1% | 95.3% |
| 4984325 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.54 | 42.0 | 4.07e-01 | 94.2% | 72.5% |
| 3279590 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.53 | 43.0 | 4.49e-01 | 85.6% | 96.0% |
| 4947338 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.51 | 47.0 | 4.20e-01 | 100.0% | 87.9% |
D2
high
residues 154-350
Domain cluster:
representative
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5018771 | 160.1.1.0 ↗ | alpha superhelices › C-terminal domain of alpha and beta subunits of F1 ATP synthase › C-terminal domain of alpha and beta subunits of F1 ATP synthase › C-terminal domain of alpha and beta subunits of F1 ATP synthase | 0.83 | 75.0 | 7.75e-01 | 95.4% | 99.5% |
| 3937970 | 102.1.3.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › PAP/OAS1 substrate-binding domain | 0.52 | 36.0 | 3.73e-01 | 92.9% | 73.2% |