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LSDeep1_scaffold_42_prodigal-single.1__X__X__00114
Bact-VirLSDeep1_scaffold_42_prodigal-single.1__X__X__00114
Identity
- Kingdom:
- phage
Quality
75.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 70-118
Domain cluster:
representative
CATH (79)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3n8bA00 | 3.10.450.700 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.79 | 59.0 | 5.17e-01 | 100.0% | 53.3% |
| 1jkfA03 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.76 | 54.0 | 5.06e-01 | 100.0% | 61.7% |
| 2pimA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.73 | 63.0 | 4.63e-01 | 98.0% | 67.4% |
| 3lw3B00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.71 | 60.0 | 4.40e-01 | 95.9% | 61.3% |
| 4gw9A02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.71 | 49.0 | 4.00e-01 | 95.9% | 39.1% |
| 1wznA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.70 | 54.0 | 5.17e-01 | 100.0% | 73.2% |
| 2v8qA01 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.70 | 52.0 | 4.34e-01 | 95.9% | 44.9% |
| 3d6xB00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.70 | 58.0 | 4.22e-01 | 95.9% | 69.3% |
| 1q4tA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.69 | 57.0 | 4.20e-01 | 95.9% | 62.7% |
| 4ybvA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.69 | 57.0 | 4.35e-01 | 95.9% | 73.6% |
| 1a1aB00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.69 | 49.0 | 3.91e-01 | 100.0% | 37.3% |
| 3iq2A00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.68 | 53.0 | 4.02e-01 | 100.0% | 35.0% |
| 2d42A02 | 3.10.450.380 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.67 | 49.0 | 4.55e-01 | 100.0% | 60.0% |
| 1fguB02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.67 | 51.0 | 3.86e-01 | 100.0% | 33.9% |
| 3ugvA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.67 | 57.0 | 4.23e-01 | 100.0% | 38.1% |
| 2r76A00 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.67 | 59.0 | 4.28e-01 | 100.0% | 37.9% |
| 1tkkA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.66 | 59.0 | 4.42e-01 | 100.0% | 41.7% |
| 3q45A01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.66 | 60.0 | 4.31e-01 | 100.0% | 38.1% |
| 1bqgA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.66 | 59.0 | 4.18e-01 | 100.0% | 34.8% |
| 3jvaA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.66 | 59.0 | 4.42e-01 | 100.0% | 42.1% |
| 2bvbA00 | 2.60.120.710 | Mainly Beta › Sandwich › Jelly Rolls › Toxoplasma gondii micronemal protein 1 TgMIC1 | 0.66 | 56.0 | 4.10e-01 | 98.0% | 53.3% |
| 3klqA01 | 2.60.40.3050 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.66 | 58.0 | 4.26e-01 | 95.9% | 39.5% |
| 1vhzA01 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.65 | 44.0 | 3.05e-01 | 98.0% | 19.7% |
| 3kenA00 | 3.40.850.10 | Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain | 0.65 | 58.0 | 3.47e-01 | 100.0% | 33.9% |
| 3ehcB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.65 | 55.0 | 4.12e-01 | 98.0% | 41.4% |
| 5w8mA00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.64 | 48.0 | 3.23e-01 | 100.0% | 19.9% |
| 2qddA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.64 | 55.0 | 4.11e-01 | 100.0% | 38.5% |
| 3d2lA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.64 | 49.0 | 4.52e-01 | 100.0% | 65.1% |
| 2vr3B02 | 2.60.40.1290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.63 | 57.0 | 3.94e-01 | 100.0% | 75.5% |
| 2pmqA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.63 | 54.0 | 4.01e-01 | 100.0% | 38.8% |
| 4iiqC02 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.62 | 53.0 | 3.69e-01 | 100.0% | 63.5% |
| 3pcoB05 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.62 | 53.0 | 3.46e-01 | 95.9% | 57.4% |
| 4k3yC00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.62 | 49.0 | 2.95e-01 | 98.0% | 12.1% |
| 1ue6D00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.62 | 52.0 | 4.14e-01 | 98.0% | 89.4% |
| 1se8A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.62 | 53.0 | 4.13e-01 | 100.0% | 88.3% |
| 3hn3A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 54.0 | 4.25e-01 | 100.0% | 67.3% |
| 6kcvA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 47.0 | 3.19e-01 | 95.9% | 49.4% |
| 1zt4C01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.60 | 51.0 | 3.55e-01 | 100.0% | 62.6% |
| 2a74A05 | 2.60.40.1930 | Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain | 0.60 | 53.0 | 4.16e-01 | 100.0% | 63.8% |
| 4kghA00 | 3.15.10.10 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 | 0.60 | 51.0 | 3.41e-01 | 95.9% | 29.5% |
| 1p1jA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.60 | 53.0 | 4.03e-01 | 100.0% | 81.7% |
| 4ruwA01 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.60 | 50.0 | 3.09e-01 | 100.0% | 16.1% |
| 3dbxA01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.60 | 51.0 | 3.52e-01 | 100.0% | 63.3% |
| 4cvuA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 53.0 | 3.97e-01 | 100.0% | 63.0% |
| 4jhmA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.60 | 51.0 | 3.95e-01 | 100.0% | 42.7% |
| 3qvsA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.59 | 52.0 | 4.10e-01 | 100.0% | 82.2% |
| 6x5vA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 53.0 | 4.21e-01 | 100.0% | 64.6% |
| 1gr0A02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.59 | 52.0 | 4.34e-01 | 100.0% | 72.6% |
| 5odnC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.58 | 43.0 | 3.49e-01 | 100.0% | 40.2% |
| 1ix2A00 | 2.60.40.1220 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 50.0 | 4.01e-01 | 100.0% | 71.6% |
| 2bmoB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 49.0 | 3.29e-01 | 98.0% | 24.7% |
| 6k96B02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.58 | 50.0 | 4.05e-01 | 100.0% | 77.3% |
| 1kczA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.57 | 49.0 | 3.44e-01 | 100.0% | 43.6% |
| 2f86B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 47.0 | 3.47e-01 | 100.0% | 34.9% |
| 3cinA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.57 | 50.0 | 3.93e-01 | 100.0% | 81.7% |
| 4wtxA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 48.0 | 3.91e-01 | 100.0% | 63.9% |
| 4ikbA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.56 | 45.0 | 3.39e-01 | 100.0% | 34.9% |
| 5irbA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 48.0 | 3.81e-01 | 100.0% | 59.6% |
| 3jvgA01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.56 | 46.0 | 3.26e-01 | 100.0% | 62.4% |
| 1dfaA01 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.55 | 42.0 | 2.88e-01 | 87.8% | 82.7% |
| 3aa0B02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.55 | 48.0 | 3.44e-01 | 100.0% | 31.6% |
| 3ebyA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 47.0 | 3.38e-01 | 100.0% | 32.7% |
| 3bjsA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.55 | 45.0 | 3.49e-01 | 100.0% | 40.2% |
| 1uliB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 47.0 | 3.25e-01 | 100.0% | 28.8% |
| 4gs3A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 40.0 | 3.42e-01 | 100.0% | 45.6% |
| 1dt9A01 | 3.30.960.10 | Alpha Beta › 2-Layer Sandwich › Translation, Eukaryotic Peptide Chain Release Factor Subunit 1; Chain A › eRF1 domain 1 | 0.54 | 44.0 | 3.56e-01 | 98.0% | 83.8% |
| 3bioA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.54 | 47.0 | 3.61e-01 | 100.0% | 99.1% |
| 4aq1A02 | 2.60.40.1080 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 47.0 | 3.89e-01 | 100.0% | 61.5% |
| 2ckfB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 47.0 | 3.23e-01 | 100.0% | 29.4% |
| 3w5mA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.53 | 45.0 | 3.06e-01 | 100.0% | 74.1% |
| 6xaxA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 47.0 | 3.89e-01 | 100.0% | 71.8% |
| 1wfnA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 46.0 | 3.78e-01 | 100.0% | 69.3% |
| 4mt4A00 | 1.20.1600.10 | Mainly Alpha › Up-down Bundle › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.52 | 43.0 | 2.54e-01 | 100.0% | 48.3% |
| 3bc9A01 | 2.60.40.1220 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 42.0 | 3.54e-01 | 100.0% | 67.7% |
| 3n91A02 | 2.40.128.420 | Mainly Beta › Beta Barrel › Lipocalin › | 0.51 | 43.0 | 3.24e-01 | 100.0% | 55.9% |
| 8egxA04 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.51 | 45.0 | 3.58e-01 | 100.0% | 60.4% |
| 3pqvA02 | 3.30.360.20 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › RNA 3'-terminal phosphate cyclase, insert domain | 0.51 | 44.0 | 3.56e-01 | 100.0% | 78.1% |
| 4ibnA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.51 | 39.0 | 2.77e-01 | 98.0% | 24.5% |
| 4uv3E01 | 3.40.50.10610 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ABC-type transport auxiliary lipoprotein component | 0.51 | 43.0 | 2.90e-01 | 100.0% | 30.5% |
ECOD (69)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3678038 | 2.1.1.76 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 | 0.81 | 63.0 | 5.45e-01 | 100.0% | 56.0% |
| 3366703 | 2.1.1.157 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CDC24_OB2 | 0.80 | 58.0 | 4.23e-01 | 100.0% | 28.9% |
| 3504767 | 2.1.1.76 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 | 0.77 | 60.0 | 5.34e-01 | 100.0% | 60.0% |
| 3648384 | 222.1.1.4 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT | 0.77 | 65.0 | 4.54e-01 | 95.9% | 59.3% |
| 4593266 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.76 | 59.0 | 5.09e-01 | 100.0% | 54.7% |
| 4263600 | 222.1.1.12 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PS-DH | 0.73 | 61.0 | 4.11e-01 | 95.9% | 48.7% |
| 3858981 | 295.1.1.4 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › COMM_domain | 0.72 | 62.0 | 5.50e-01 | 100.0% | 67.1% |
| 4108243 | 222.1.1.12 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PS-DH | 0.71 | 59.0 | 4.03e-01 | 95.9% | 49.7% |
| 2900859 | 222.1.1.17 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PKS_DH_N | 0.71 | 60.0 | 4.66e-01 | 98.0% | 78.3% |
| 3541704 | 222.1.1.4 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT | 0.71 | 58.0 | 4.49e-01 | 98.0% | 75.8% |
| 3961744 | 222.1.1.0 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase | 0.70 | 59.0 | 4.30e-01 | 95.9% | 68.3% |
| 3722822 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.70 | 54.0 | 3.17e-01 | 98.0% | 9.9% |
| 3255279 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.70 | 53.0 | 3.07e-01 | 95.9% | 9.3% |
| 3551896 | 295.1.1.4 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › COMM_domain | 0.69 | 58.0 | 5.23e-01 | 100.0% | 67.1% |
| 3621025 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.69 | 61.0 | 5.54e-01 | 100.0% | 73.8% |
| 3394752 | 5.1.5.41 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40_2 | 0.69 | 61.0 | 3.60e-01 | 100.0% | 13.6% |
| 3799143 | 292.2.1.0 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain | 0.67 | 59.0 | 4.28e-01 | 100.0% | 37.8% |
| 3719842 | 5.1.3.28 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_3 | 0.66 | 56.0 | 3.45e-01 | 100.0% | 15.9% |
| 3674239 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.65 | 58.0 | 4.50e-01 | 100.0% | 50.5% |
| 3741279 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.65 | 52.0 | 3.79e-01 | 100.0% | 31.4% |
| 3181100 | 223.1.1.24 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_8 | 0.64 | 54.0 | 3.96e-01 | 93.9% | 36.2% |
| 3974473 | 218.1.1.0 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like | 0.64 | 57.0 | 4.08e-01 | 100.0% | 35.7% |
| 3248736 | 295.1.1.4 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › COMM_domain | 0.63 | 54.0 | 4.60e-01 | 100.0% | 58.7% |
| 3797734 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.63 | 53.0 | 3.56e-01 | 95.9% | 57.5% |
| 4986795 | 2484.1.1.66 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_3 | 0.62 | 53.0 | 3.64e-01 | 100.0% | 28.5% |
| 4982481 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.62 | 45.0 | 3.80e-01 | 100.0% | 43.2% |
| 4942841 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.61 | 50.0 | 3.81e-01 | 100.0% | 38.3% |
| 4979858 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.61 | 55.0 | 3.25e-01 | 98.0% | 24.5% |
| 2780879 | 1172.1.1.1 ↗ | beta barrels › UL131A-like › UL130 C-terminal domain › UL130 C-terminal domain › Gp_UL130 | 0.61 | 50.0 | 3.86e-01 | 95.9% | 40.5% |
| 3444419 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.61 | 54.0 | 4.27e-01 | 100.0% | 49.0% |
| 3203130 | 7579.1.1.24 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › LIP | 0.61 | 52.0 | 3.04e-01 | 100.0% | 23.8% |
| 2541776 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.61 | 53.0 | 4.12e-01 | 100.0% | 89.9% |
| 3716709 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.61 | 54.0 | 4.01e-01 | 100.0% | 86.2% |
| 3288634 | 218.1.1.1 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N | 0.60 | 52.0 | 4.15e-01 | 100.0% | 49.0% |
| 4997175 | 218.1.1.1 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N | 0.60 | 54.0 | 4.09e-01 | 100.0% | 45.5% |
| 1174598 | 218.1.1.1 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N | 0.60 | 51.0 | 3.86e-01 | 100.0% | 39.7% |
| 3386947 | 2011.1.1.14 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › DUF4910 | 0.60 | 49.0 | 3.14e-01 | 98.0% | 34.8% |
| 3705696 | 304.114.1.0 ↗ | a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain | 0.59 | 50.0 | 3.31e-01 | 100.0% | 46.5% |
| 3997968 | 5.1.5.128 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_NUP159_NUP214 | 0.59 | 48.0 | 3.13e-01 | 100.0% | 22.9% |
| 4334767 | 218.1.1.0 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like | 0.59 | 50.0 | 4.13e-01 | 100.0% | 53.7% |
| 3704401 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.59 | 53.0 | 4.00e-01 | 100.0% | 47.8% |
| 3716955 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 53.0 | 4.69e-01 | 100.0% | 78.6% |
| 3173021 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.59 | 49.0 | 3.50e-01 | 100.0% | 31.5% |
| 3848773 | 243.1.1.13 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › CaMKII_AD | 0.58 | 47.0 | 3.37e-01 | 98.0% | 28.5% |
| 3725346 | 243.1.1.25 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_3 | 0.57 | 46.0 | 3.53e-01 | 100.0% | 36.2% |
| 5018864 | 11.1.1.895 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF29538 | 0.57 | 51.0 | 3.90e-01 | 100.0% | 67.3% |
| 3869070 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.56 | 50.0 | 4.09e-01 | 100.0% | 68.9% |
| 3689179 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.56 | 44.0 | 2.86e-01 | 100.0% | 17.0% |
| 1242000 | 218.1.1.1 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N | 0.55 | 45.0 | 3.44e-01 | 100.0% | 37.0% |
| 3720086 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.55 | 47.0 | 3.29e-01 | 100.0% | 89.4% |
| 6380 | 243.1.1.1 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › Ring_hydroxyl_B | 0.55 | 47.0 | 3.38e-01 | 100.0% | 32.7% |
| 3487886 | 2485.2.1.0 ↗ | a+b three layers › Thioredoxin-like › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RNA 3'-terminal phosphate cyclase, RPTC, insert domain | 0.54 | 46.0 | 3.68e-01 | 100.0% | 72.4% |
| 152653 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.54 | 40.0 | 3.42e-01 | 100.0% | 45.6% |
| 5033989 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 47.0 | 4.53e-01 | 98.0% | 96.4% |
| 2632043 | 243.1.1.26 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_4 | 0.54 | 46.0 | 3.38e-01 | 100.0% | 35.0% |
| 3511040 | 2485.2.1.1 ↗ | a+b three layers › Thioredoxin-like › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RTC_insert | 0.53 | 45.0 | 3.66e-01 | 100.0% | 76.0% |
| 3266716 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 47.0 | 3.99e-01 | 100.0% | 61.3% |
| 5060238 | 11.1.1.533 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › HYR | 0.53 | 44.0 | 3.74e-01 | 100.0% | 63.3% |
| 3210879 | 2.4.1.0 ↗ | beta barrels › OB-fold › MOP-like › MOP-like | 0.53 | 40.0 | 4.01e-01 | 100.0% | 90.0% |
| 3940319 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.52 | 43.0 | 2.63e-01 | 95.9% | 17.7% |
| 3190573 | 706.2.1.0 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G | 0.52 | 45.0 | 4.36e-01 | 98.0% | 100.0% |
| 3506977 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.52 | 42.0 | 3.19e-01 | 100.0% | 56.6% |
| 3971791 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 45.0 | 4.14e-01 | 100.0% | 84.6% |
| 3291641 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.51 | 41.0 | 3.47e-01 | 98.0% | 51.6% |
| 3759236 | 223.1.1.77 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › Intu_longin_3 | 0.51 | 41.0 | 2.96e-01 | 98.0% | 28.2% |
| 4977495 | 2011.2.1.7 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › PAC2 | 0.51 | 40.0 | 2.69e-01 | 98.0% | 22.1% |
| 3242737 | 5.1.5.47 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › BCAS3_WD40 | 0.51 | 41.0 | 2.40e-01 | 100.0% | 24.3% |
| None | — | 0.50 | 39.0 | 2.52e-01 | 89.8% | 18.5% | |
| 3269709 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 43.0 | 3.70e-01 | 100.0% | 61.3% |
D2
medium
residues 11-68