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LSDeep1_scaffold_42_prodigal-single.1__X__X__00122
Bact-VirLSDeep1_scaffold_42_prodigal-single.1__X__X__00122
Identity
- Kingdom:
- phage
Quality
74.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 247-360
Domain cluster:
rep: KY940711.1__ARQ95423.1__X__00191__D22-115
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF22653.2 best | DUF7007 | 51.7 | 1.70e-13 | 93.0% | 75.0% |
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3bpqD00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.58 | 29.0 | 3.25e-01 | 77.2% | 60.5% |
| 1cqaA00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.55 | 35.0 | 3.44e-01 | 99.1% | 58.5% |
| 4qxaB00 | 2.30.29.230 | Mainly Beta › Roll › PH-domain like › | 0.55 | 39.0 | 3.61e-01 | 73.7% | 98.0% |
| 4jhnD00 | 2.130.10.30 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II | 0.53 | 43.0 | 3.09e-01 | 87.7% | 40.6% |
| 3akjA01 | 3.30.200.120 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › | 0.52 | 32.0 | 3.91e-01 | 71.1% | 95.9% |
| 1hi9A02 | 3.30.1360.130 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Dipeptide transport protein | 0.51 | 31.0 | 3.56e-01 | 74.6% | 88.2% |
| 4nkbA01 | 3.30.1120.120 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.51 | 35.0 | 3.52e-01 | 78.9% | 71.1% |
| 1k82B01 | 3.20.190.10 | Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › MutM-like, N-terminal | 0.50 | 35.0 | 3.44e-01 | 71.9% | 89.8% |
| 5cenA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.50 | 32.0 | 3.70e-01 | 70.2% | 93.6% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3258907 | 223.2.1.1 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Profilin | 0.58 | 35.0 | 3.35e-01 | 95.6% | 51.5% |
| 3241852 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.53 | 35.0 | 3.59e-01 | 86.8% | 67.8% |
| 3740180 | 12.1.1.14 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › A_amylase_dom_C | 0.52 | 30.0 | 3.31e-01 | 82.5% | 71.1% |
| 5028275 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.50 | 37.0 | 2.68e-01 | 78.1% | 35.7% |
D2
medium
residues 1-31_51-101
Domain cluster:
representative
CATH (45)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2k49A00 | 2.30.29.80 | Mainly Beta › Roll › PH-domain like › | 0.78 | 57.0 | 4.96e-01 | 75.6% | 100.0% |
| 4zfvB01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.73 | 50.0 | 3.79e-01 | 70.7% | 80.7% |
| 2knrA00 | 3.40.1530.20 | Alpha Beta › 3-Layer(aba) Sandwich › hypothetical protein tt1805 › Protein of unknown function (DUF1491) | 0.68 | 52.0 | 4.65e-01 | 82.9% | 73.7% |
| 4ifeA02 | 3.30.420.240 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.68 | 50.0 | 3.63e-01 | 78.0% | 85.0% |
| 3bzcA03 | 3.30.420.140 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › YqgF/RNase H-like domain | 0.67 | 48.0 | 4.21e-01 | 76.8% | 91.4% |
| 2h3gX02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.66 | 46.0 | 3.68e-01 | 72.0% | 71.1% |
| 6jdbA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.66 | 46.0 | 3.78e-01 | 73.2% | 81.7% |
| 2q2rA02 | 3.40.367.20 | Alpha Beta › 3-Layer(aba) Sandwich › Hexokinase; domain 1 › | 0.66 | 46.0 | 3.49e-01 | 74.4% | 71.9% |
| 5nckA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.65 | 45.0 | 3.51e-01 | 73.2% | 81.7% |
| 4ijaA03 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.65 | 44.0 | 3.66e-01 | 70.7% | 81.3% |
| 3ohrA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.65 | 45.0 | 3.47e-01 | 73.2% | 82.2% |
| 1sz2A02 | 3.40.367.20 | Alpha Beta › 3-Layer(aba) Sandwich › Hexokinase; domain 1 › | 0.64 | 44.0 | 3.38e-01 | 72.0% | 70.0% |
| 3thxB02 | 3.30.420.110 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › MutS, connector domain | 0.64 | 55.0 | 4.52e-01 | 96.3% | 100.0% |
| 3psfA04 | 3.30.420.140 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › YqgF/RNase H-like domain | 0.64 | 47.0 | 3.80e-01 | 79.3% | 79.3% |
| 2gupA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.63 | 45.0 | 3.46e-01 | 74.4% | 83.8% |
| 3ttcA03 | 3.30.420.360 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.63 | 48.0 | 4.21e-01 | 80.5% | 76.0% |
| 3vpzA02 | 3.40.367.20 | Alpha Beta › 3-Layer(aba) Sandwich › Hexokinase; domain 1 › | 0.63 | 44.0 | 3.37e-01 | 73.2% | 70.5% |
| 4htlA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.63 | 45.0 | 3.44e-01 | 74.4% | 83.7% |
| 5umsA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.62 | 44.0 | 4.08e-01 | 73.2% | 72.5% |
| 1i3pA00 | 2.60.250.10 | Mainly Beta › Sandwich › Baculovirus p35 › Baculovirus p35 | 0.62 | 42.0 | 2.96e-01 | 70.7% | 89.8% |
| 3syjA02 | 2.160.20.20 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.62 | 40.0 | 2.37e-01 | 74.4% | 8.4% |
| 1pz4A00 | 3.30.1050.10 | Alpha Beta › 2-Layer Sandwich › Nonspecific Lipid-transfer Protein; Chain A › SCP2 sterol-binding domain | 0.62 | 35.0 | 3.15e-01 | 74.4% | 40.7% |
| 1okjA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.60 | 41.0 | 4.00e-01 | 70.7% | 65.3% |
| 6ovpA00 | 3.30.1050.10 | Alpha Beta › 2-Layer Sandwich › Nonspecific Lipid-transfer Protein; Chain A › SCP2 sterol-binding domain | 0.59 | 37.0 | 3.28e-01 | 74.4% | 43.2% |
| 1w97L01 | 3.30.420.380 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.59 | 44.0 | 3.60e-01 | 79.3% | 87.7% |
| 2b4wA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.59 | 46.0 | 3.14e-01 | 84.1% | 40.2% |
| 2qgyB01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.58 | 40.0 | 3.42e-01 | 72.0% | 90.5% |
| 4ioyX02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.58 | 44.0 | 3.92e-01 | 79.3% | 68.7% |
| 3kd4A01 | 2.60.40.3140 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 44.0 | 3.34e-01 | 82.9% | 82.2% |
| 1s14B00 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.57 | 42.0 | 3.25e-01 | 76.8% | 78.1% |
| 3cwvA01 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.57 | 42.0 | 3.17e-01 | 78.0% | 77.3% |
| 2w20B01 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.57 | 44.0 | 2.85e-01 | 84.1% | 43.4% |
| 1w0pA02 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.56 | 44.0 | 2.84e-01 | 85.4% | 43.0% |
| 2v5gA00 | 3.40.1690.10 | Alpha Beta › 3-Layer(aba) Sandwich › name from scop › secretion proteins EscU | 0.55 | 41.0 | 3.67e-01 | 81.7% | 56.7% |
| 1eurA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.54 | 39.0 | 2.55e-01 | 75.6% | 88.4% |
| 1uv4A00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.53 | 42.0 | 2.90e-01 | 85.4% | 55.7% |
| 4kcaA02 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.53 | 43.0 | 2.77e-01 | 87.8% | 55.7% |
| 1b63A01 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.53 | 37.0 | 2.80e-01 | 73.2% | 72.7% |
| 2y23A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 36.0 | 3.41e-01 | 70.7% | 96.2% |
| 3u4vA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 43.0 | 3.88e-01 | 90.2% | 64.7% |
| 2zuoA10 | 3.30.479.30 | Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › Band 7 domain | 0.52 | 36.0 | 3.27e-01 | 72.0% | 100.0% |
| 2kdvA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.51 | 35.0 | 2.95e-01 | 74.4% | 93.3% |
| 8axiA01 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.51 | 38.0 | 2.53e-01 | 80.5% | 41.0% |
| 3mmyA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.50 | 38.0 | 2.49e-01 | 79.3% | 84.5% |
| 7obmA01 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.50 | 41.0 | 2.72e-01 | 87.8% | 26.2% |
ECOD (61)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4065184 | 2484.1.1.41 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › AnmK | 0.72 | 49.0 | 3.82e-01 | 70.7% | 78.9% |
| 4267201 | 2484.1.1.41 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › AnmK | 0.72 | 51.0 | 3.82e-01 | 74.4% | 87.0% |
| 4340539 | 2484.1.1.41 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › AnmK | 0.70 | 48.0 | 3.76e-01 | 70.7% | 77.6% |
| 119224 | 3098.1.1.1 ↗ | a+b two layers › Uncharacterized protein ATC0905 › Uncharacterized protein ATC0905 › Uncharacterized protein ATC0905 › DUF1491 | 0.68 | 52.0 | 4.65e-01 | 82.9% | 73.7% |
| 3600012 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.68 | 51.0 | 4.19e-01 | 80.5% | 98.0% |
| 5044642 | 2484.1.1.302 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB | 0.67 | 52.0 | 3.71e-01 | 84.1% | 82.0% |
| 3700143 | 2484.1.1.48 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II | 0.67 | 59.0 | 4.68e-01 | 98.8% | 92.4% |
| 3263647 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.67 | 48.0 | 4.19e-01 | 74.4% | 69.2% |
| 3180145 | 2484.1.1.21 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › BcrAD_BadFG | 0.66 | 45.0 | 3.31e-01 | 72.0% | 93.2% |
| 4276915 | 2484.1.1.48 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II | 0.66 | 57.0 | 4.72e-01 | 97.6% | 90.0% |
| 3597605 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.66 | 48.0 | 3.78e-01 | 76.8% | 74.7% |
| 5045495 | 268.1.1.0 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related | 0.65 | 38.0 | 3.06e-01 | 75.6% | 31.0% |
| 3712058 | 2484.1.1.72 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › YqgF | 0.65 | 48.0 | 3.88e-01 | 79.3% | 80.6% |
| 4647734 | 268.1.1.1 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related › SCP2 | 0.65 | 39.0 | 3.41e-01 | 74.4% | 40.0% |
| 4429265 | 2484.1.1.31 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Glucokinase | 0.65 | 44.0 | 3.31e-01 | 72.0% | 68.2% |
| 3256010 | 2484.1.1.48 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II | 0.65 | 53.0 | 4.27e-01 | 91.5% | 92.1% |
| 5021767 | 268.1.1.0 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related | 0.65 | 44.0 | 3.79e-01 | 73.2% | 44.6% |
| 3701860 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.64 | 44.0 | 4.21e-01 | 70.7% | 74.7% |
| 3957263 | 268.1.1.0 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related | 0.64 | 40.0 | 3.61e-01 | 76.8% | 46.8% |
| 3727382 | 2484.1.1.21 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › BcrAD_BadFG | 0.64 | 44.0 | 3.29e-01 | 72.0% | 92.3% |
| 4976836 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.64 | 51.0 | 3.25e-01 | 87.8% | 54.4% |
| 5029720 | 268.1.1.0 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related | 0.64 | 40.0 | 3.70e-01 | 74.4% | 51.0% |
| 3384667 | 2484.1.1.157 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF4371 | 0.64 | 51.0 | 3.31e-01 | 89.0% | 74.6% |
| 4150469 | 4263.2.1.1 ↗ | a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain › FtsH_ext | 0.64 | 45.0 | 4.72e-01 | 74.4% | 80.0% |
| 4931792 | 306.3.1.6 ↗ | a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › DEAD_assoc | 0.64 | 48.0 | 3.60e-01 | 79.3% | 97.4% |
| 4514389 | 2484.1.1.31 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Glucokinase | 0.64 | 44.0 | 3.34e-01 | 72.0% | 70.7% |
| 5056882 | 4081.1.1.12 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › DUF2207 | 0.63 | 48.0 | 3.62e-01 | 81.7% | 63.4% |
| 4605798 | 2484.1.1.31 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Glucokinase | 0.63 | 45.0 | 3.47e-01 | 75.6% | 92.1% |
| 4661838 | 2484.1.1.48 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II | 0.63 | 54.0 | 4.22e-01 | 98.8% | 92.6% |
| 3181725 | 2484.1.1.21 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › BcrAD_BadFG | 0.62 | 44.0 | 3.21e-01 | 73.2% | 91.3% |
| 5044329 | 4081.1.1.0 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related | 0.62 | 43.0 | 3.30e-01 | 72.0% | 77.9% |
| 3920905 | 220.1.1.19 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Rttp106-like_middle | 0.62 | 43.0 | 3.75e-01 | 72.0% | 58.9% |
| 3964241 | 4263.2.1.1 ↗ | a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain › FtsH_ext | 0.61 | 40.0 | 4.25e-01 | 72.0% | 77.1% |
| 4032501 | 4263.2.1.1 ↗ | a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain › FtsH_ext | 0.61 | 42.0 | 4.39e-01 | 72.0% | 78.7% |
| 185599 | 3392.1.1.0 ↗ | a+b two layers › Cytoplasmic domain of BfpC › Cytoplasmic domain of BfpC › Cytoplasmic domain of BfpC | 0.61 | 45.0 | 3.60e-01 | 78.0% | 48.8% |
| 3165271 | 207.2.1.60 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta-sol_PIC_HAP1_IgA0_2nd | 0.61 | 44.0 | 2.74e-01 | 76.8% | 18.2% |
| 4627625 | 2484.1.1.31 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Glucokinase | 0.60 | 42.0 | 3.20e-01 | 74.4% | 82.3% |
| 3925928 | 268.1.1.1 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related › SCP2 | 0.60 | 35.0 | 3.18e-01 | 74.4% | 40.9% |
| 2391702 | 2484.1.1.31 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Glucokinase | 0.60 | 43.0 | 3.22e-01 | 78.0% | 89.8% |
| 1125314 | 268.1.1.1 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related › SCP2 | 0.60 | 37.0 | 3.21e-01 | 74.4% | 39.8% |
| 2722539 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.59 | 40.0 | 3.70e-01 | 70.7% | 86.8% |
| 3269812 | 220.1.1.83 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › VID27_N | 0.58 | 45.0 | 3.57e-01 | 82.9% | 81.2% |
| 4421199 | 225.1.1.3 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c | 0.58 | 42.0 | 3.06e-01 | 76.8% | 75.5% |
| 3369497 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.58 | 46.0 | 3.69e-01 | 85.4% | 50.3% |
| 3969516 | 4081.1.1.0 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related | 0.57 | 42.0 | 3.18e-01 | 78.0% | 72.0% |
| 3396717 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.57 | 41.0 | 3.99e-01 | 76.8% | 66.3% |
| 3285777 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.56 | 38.0 | 3.18e-01 | 70.7% | 78.7% |
| 4026079 | 5.1.4.254 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_NOL10_N | 0.56 | 40.0 | 2.65e-01 | 75.6% | 90.2% |
| 2643433 | 5.1.3.21 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Fungal_lectin | 0.54 | 41.0 | 2.72e-01 | 80.5% | 84.4% |
| 5081221 | 230.6.1.1 ↗ | a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain › Ribosomal_S3Ae | 0.53 | 37.0 | 3.53e-01 | 74.4% | 88.6% |
| 4196175 | 230.6.1.1 ↗ | a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain › Ribosomal_S3Ae | 0.53 | 37.0 | 3.51e-01 | 75.6% | 89.5% |
| 4968008 | 230.6.1.1 ↗ | a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain › Ribosomal_S3Ae | 0.52 | 39.0 | 3.65e-01 | 81.7% | 92.4% |
| 3700023 | 230.5.1.1 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 | 0.52 | 39.0 | 3.49e-01 | 80.5% | 90.0% |
| 3932593 | 2.1.1.179 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REV3_N | 0.52 | 41.0 | 3.84e-01 | 87.8% | 93.3% |
| 3598969 | 230.6.1.0 ↗ | a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain | 0.52 | 36.0 | 3.19e-01 | 73.2% | 79.2% |
| 5058343 | 230.5.1.1 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 | 0.52 | 37.0 | 3.30e-01 | 76.8% | 88.8% |
| 3717304 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.52 | 36.0 | 2.51e-01 | 74.4% | 76.3% |
| 3589335 | 221.4.1.0 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix | 0.51 | 35.0 | 3.24e-01 | 72.0% | 80.0% |
| 3716364 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.51 | 35.0 | 2.34e-01 | 72.0% | 90.6% |
| 3700859 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.51 | 40.0 | 2.59e-01 | 87.8% | 34.0% |
| 3605179 | 230.5.1.1 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 | 0.50 | 37.0 | 3.08e-01 | 81.7% | 68.5% |
D3
medium
residues 110-225
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2cfuA02 | 1.25.40.880 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Alkyl sulfatase, dimerisation domain | 0.54 | 35.0 | 3.26e-01 | 79.3% | 53.2% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3397519 | 109.4.1.386 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Rapsyn_N | 0.52 | 46.0 | 3.18e-01 | 100.0% | 74.0% |
| 3929397 | 5048.1.1.1 ↗ | alpha complex topology › Aquaporin-like › Aquaporin-like › Aquaporin-like › MIP | 0.50 | 37.0 | 2.96e-01 | 75.9% | 81.7% |