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LSDeep1_scaffold_42_prodigal-single.1__X__X__00170
Bact-VirLSDeep1_scaffold_42_prodigal-single.1__X__X__00170
Identity
- Kingdom:
- phage
Quality
68.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 16-77
D2
high
residues 98-274
Domain cluster:
rep: pre3_saliva_scaffold_7_prodigal-single.1__X__X__00207__D143-323
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00644.27 best | PARP | 40.2 | 3.70e-10 | 71.2% | 41.2% |
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1gs0A02 | 3.90.228.10 | Alpha Beta › Alpha-Beta Complex › Phosphoenolpyruvate Carboxykinase; domain 3 › | 0.76 | 67.0 | 6.21e-01 | 91.5% | 98.1% |
| 4gv2A02 | 3.90.228.10 | Alpha Beta › Alpha-Beta Complex › Phosphoenolpyruvate Carboxykinase; domain 3 › | 0.75 | 66.0 | 6.20e-01 | 91.5% | 100.0% |
| 3hkvA00 | 3.90.228.10 | Alpha Beta › Alpha-Beta Complex › Phosphoenolpyruvate Carboxykinase; domain 3 › | 0.72 | 62.0 | 6.06e-01 | 89.8% | 98.4% |
| 2rf5A00 | 3.90.228.10 | Alpha Beta › Alpha-Beta Complex › Phosphoenolpyruvate Carboxykinase; domain 3 › | 0.71 | 63.0 | 5.96e-01 | 92.7% | 97.6% |
| 2x5yA00 | 3.90.228.10 | Alpha Beta › Alpha-Beta Complex › Phosphoenolpyruvate Carboxykinase; domain 3 › | 0.70 | 62.0 | 6.30e-01 | 92.7% | 98.8% |
| 6tl1B01 | 3.90.228.10 | Alpha Beta › Alpha-Beta Complex › Phosphoenolpyruvate Carboxykinase; domain 3 › | 0.68 | 58.0 | 5.58e-01 | 89.3% | 99.5% |
| 4wksC02 | 2.30.120.10 | Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region | 0.51 | 22.0 | 3.22e-01 | 92.7% | 90.7% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4014210 | 237.1.1.0 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation | 0.76 | 70.0 | 6.34e-01 | 95.5% | 99.6% |
| 3252897 | 237.1.1.1 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PARP | 0.76 | 69.0 | 6.50e-01 | 94.9% | 97.6% |
| 3908660 | 237.1.1.1 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PARP | 0.76 | 58.0 | 6.33e-01 | 78.0% | 98.7% |
| 3798868 | 237.1.1.1 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PARP | 0.75 | 71.0 | 6.40e-01 | 100.0% | 99.1% |
| 3798872 | 237.1.1.0 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation | 0.75 | 70.0 | 6.31e-01 | 97.2% | 95.2% |
| 3878517 | 237.1.1.1 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PARP | 0.75 | 71.0 | 6.46e-01 | 100.0% | 97.3% |
| 3536040 | 237.1.1.1 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PARP | 0.74 | 69.0 | 6.40e-01 | 97.2% | 91.6% |
| 3241341 | 237.1.1.1 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PARP | 0.71 | 65.0 | 6.19e-01 | 95.5% | 98.5% |
| 3879371 | 237.1.1.1 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PARP | 0.70 | 63.0 | 6.26e-01 | 93.8% | 97.8% |
| 4876939 | 237.1.1.1 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PARP | 0.70 | 62.0 | 6.15e-01 | 92.7% | 98.9% |
| 3353724 | 237.1.1.0 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation | 0.66 | 60.0 | 5.86e-01 | 95.5% | 98.4% |
| 3410782 | 237.1.1.0 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation | 0.60 | 51.0 | 5.34e-01 | 94.4% | 97.5% |