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LSDeep1_scaffold_42_prodigal-single.1__X__X__00294
Bact-VirLSDeep1_scaffold_42_prodigal-single.1__X__X__00294
Identity
- Kingdom:
- phage
Quality
69.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-59
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3nbiA01 | 1.10.8.1020 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › RecQ-mediated genome instability protein 1, N-terminal domain | 0.71 | 60.0 | 5.84e-01 | 98.1% | 100.0% |
| 4pxhB00 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.70 | 49.0 | 4.30e-01 | 100.0% | 50.7% |
| 3bosA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.63 | 51.0 | 4.84e-01 | 100.0% | 88.1% |
| 3ilkA02 | 1.10.8.590 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.59 | 42.0 | 4.01e-01 | 80.8% | 76.5% |
| 3vkhB01 | 1.10.287.2620 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.58 | 36.0 | 3.36e-01 | 92.3% | 50.0% |
| 3b0dB00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.57 | 42.0 | 3.50e-01 | 80.8% | 70.5% |
| 1s8nA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 41.0 | 4.02e-01 | 80.8% | 89.7% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5031849 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.72 | 61.0 | 5.86e-01 | 98.1% | 88.3% |
| 3972276 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.69 | 59.0 | 5.58e-01 | 98.1% | 80.0% |
| 3604537 | 101.1.2.542 ↗ | alpha arrays › HTH › HTH › winged helix domain › ATPase_2 | 0.68 | 58.0 | 5.21e-01 | 100.0% | 70.7% |
| 3604666 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 57.0 | 5.64e-01 | 100.0% | 94.5% |
| 3387896 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.67 | 56.0 | 5.19e-01 | 98.1% | 88.6% |
| 4294585 | 103.1.1.67 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UPF0515 | 0.67 | 51.0 | 5.36e-01 | 90.4% | 97.8% |
| 4033485 | 571.1.1.1 ↗ | alpha arrays › Replisome organizer (g39p helicase loader/inhibitor protein) › Replisome organizer (g39p helicase loader/inhibitor protein) › Replisome organizer (g39p helicase loader/inhibitor protein) › G39P_N | 0.65 | 52.0 | 4.89e-01 | 92.3% | 89.2% |
| 3254545 | 103.11.1.0 ↗ | alpha arrays › RuvA-C › RMI1 N-terminal helical domain-related › RMI1 N-terminal helical domain-related | 0.63 | 52.0 | 5.17e-01 | 100.0% | 100.0% |