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LSDeep1_scaffold_42_prodigal-single.1__X__X__00395
Bact-VirLSDeep1_scaffold_42_prodigal-single.1__X__X__00395
Identity
- Kingdom:
- phage
Quality
69.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-70_84-152
Domain cluster:
rep: JGI24723J26617_10000007_prodigal-single.1__X__X__00027__D13-146
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wfxA02 | 3.20.170.30 | Alpha Beta › Alpha-Beta Barrel › ADP-ribosylation fold › | 0.80 | 50.0 | 6.13e-01 | 88.3% | 95.6% |
| 2o0pA00 | 3.20.170.20 | Alpha Beta › Alpha-Beta Barrel › ADP-ribosylation fold › Protein of unknown function DUF952 | 0.76 | 53.0 | 5.73e-01 | 89.1% | 84.2% |
| 2x5yA00 | 3.90.228.10 | Alpha Beta › Alpha-Beta Complex › Phosphoenolpyruvate Carboxykinase; domain 3 › | 0.65 | 51.0 | 4.73e-01 | 92.0% | 66.1% |
| 3q9oA03 | 3.90.175.10 | Alpha Beta › Alpha-Beta Complex › Diphtheria Toxin; domain 1 › Diphtheria Toxin, domain 1 | 0.62 | 52.0 | 4.51e-01 | 90.5% | 69.0% |
| 3b82B00 | 3.90.175.10 | Alpha Beta › Alpha-Beta Complex › Diphtheria Toxin; domain 1 › Diphtheria Toxin, domain 1 | 0.61 | 52.0 | 4.55e-01 | 91.2% | 67.6% |
| 7rb4A01 | 3.90.175.10 | Alpha Beta › Alpha-Beta Complex › Diphtheria Toxin; domain 1 › Diphtheria Toxin, domain 1 | 0.61 | 54.0 | 4.71e-01 | 95.6% | 90.6% |
| 1f0lA01 | 3.90.175.10 | Alpha Beta › Alpha-Beta Complex › Diphtheria Toxin; domain 1 › Diphtheria Toxin, domain 1 | 0.60 | 54.0 | 4.90e-01 | 97.8% | 85.0% |
| 2hw2A00 | 3.20.170.40 | Alpha Beta › Alpha-Beta Barrel › ADP-ribosylation fold › Rifampin ADP-ribosyltransferase domain | 0.60 | 45.0 | 4.55e-01 | 100.0% | 76.8% |
| 6tl1B01 | 3.90.228.10 | Alpha Beta › Alpha-Beta Complex › Phosphoenolpyruvate Carboxykinase; domain 3 › | 0.59 | 54.0 | 4.76e-01 | 99.3% | 87.9% |
| 3hkvA00 | 3.90.228.10 | Alpha Beta › Alpha-Beta Complex › Phosphoenolpyruvate Carboxykinase; domain 3 › | 0.56 | 52.0 | 4.63e-01 | 99.3% | 84.9% |
| 4gv2A02 | 3.90.228.10 | Alpha Beta › Alpha-Beta Complex › Phosphoenolpyruvate Carboxykinase; domain 3 › | 0.55 | 51.0 | 4.36e-01 | 99.3% | 89.5% |
| 1gs0A02 | 3.90.228.10 | Alpha Beta › Alpha-Beta Complex › Phosphoenolpyruvate Carboxykinase; domain 3 › | 0.55 | 50.0 | 4.31e-01 | 99.3% | 86.0% |
ECOD (39)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4296568 | 237.1.1.4 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PTS_2-RNA | 0.80 | 52.0 | 6.20e-01 | 95.6% | 94.7% |
| 4125268 | 237.1.1.4 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PTS_2-RNA | 0.80 | 52.0 | 6.35e-01 | 97.8% | 100.0% |
| 4679144 | 237.1.1.4 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PTS_2-RNA | 0.79 | 52.0 | 6.15e-01 | 97.8% | 95.8% |
| 4008473 | 237.1.1.4 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PTS_2-RNA | 0.78 | 50.0 | 5.83e-01 | 94.9% | 88.9% |
| 3106804 | 237.1.1.4 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PTS_2-RNA | 0.78 | 52.0 | 5.95e-01 | 97.8% | 89.3% |
| 4303698 | 237.1.1.4 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PTS_2-RNA | 0.78 | 51.0 | 6.05e-01 | 95.6% | 95.7% |
| 4622968 | 237.1.1.4 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PTS_2-RNA | 0.78 | 50.0 | 6.07e-01 | 94.9% | 97.8% |
| 5077692 | 237.1.1.4 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PTS_2-RNA | 0.76 | 53.0 | 6.01e-01 | 95.6% | 92.4% |
| 4994805 | 237.1.1.4 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PTS_2-RNA | 0.76 | 51.0 | 5.80e-01 | 95.6% | 90.3% |
| 3631884 | 237.1.1.36 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › DUF7587 | 0.73 | 62.0 | 5.90e-01 | 89.8% | 97.5% |
| 3256269 | 237.1.1.0 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation | 0.72 | 51.0 | 5.79e-01 | 90.5% | 95.2% |
| 3920549 | 237.1.1.1 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PARP | 0.71 | 49.0 | 4.54e-01 | 91.2% | 56.5% |
| 3186037 | 237.1.1.3 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › Enterotoxin_a | 0.68 | 59.0 | 6.00e-01 | 97.8% | 93.3% |
| 1005578 | 237.1.1.15 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › Dot_icm_IcmQ | 0.67 | 49.0 | 4.92e-01 | 94.2% | 75.0% |
| 3196342 | 237.1.1.1 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PARP | 0.66 | 49.0 | 4.50e-01 | 93.4% | 60.3% |
| 3200918 | 237.1.1.36 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › DUF7587 | 0.65 | 59.0 | 4.85e-01 | 96.4% | 56.6% |
| 3724972 | 237.1.1.1 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PARP | 0.64 | 49.0 | 3.88e-01 | 93.4% | 41.1% |
| 3250305 | 237.1.1.1 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PARP | 0.63 | 55.0 | 4.94e-01 | 92.0% | 68.6% |
| 3202097 | 237.1.1.0 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation | 0.63 | 53.0 | 4.59e-01 | 89.8% | 71.0% |
| 3879371 | 237.1.1.1 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PARP | 0.62 | 51.0 | 4.62e-01 | 92.0% | 66.1% |
| 3543256 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.60 | 51.0 | 4.65e-01 | 92.7% | 68.9% |
| 3555152 | 237.1.1.1 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PARP | 0.59 | 54.0 | 4.84e-01 | 97.1% | 84.9% |
| 4984075 | 304.5.1.30 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › AsnC_trans_reg | 0.59 | 26.0 | 3.48e-01 | 85.4% | 76.7% |
| 3252897 | 237.1.1.1 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PARP | 0.59 | 51.0 | 4.34e-01 | 91.2% | 68.6% |
| 3241341 | 237.1.1.1 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PARP | 0.58 | 50.0 | 4.38e-01 | 92.0% | 72.4% |
| 3258251 | 237.1.1.1 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PARP | 0.58 | 50.0 | 4.21e-01 | 92.0% | 66.7% |
| 3870487 | 237.1.1.1 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PARP | 0.58 | 51.0 | 4.29e-01 | 92.7% | 66.0% |
| 3973736 | 237.1.1.11 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › RES | 0.57 | 49.0 | 4.35e-01 | 93.4% | 78.5% |
| 3727394 | 237.1.1.1 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PARP | 0.56 | 52.0 | 4.21e-01 | 99.3% | 83.2% |
| 3324343 | 237.1.1.1 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PARP | 0.56 | 49.0 | 4.35e-01 | 93.4% | 66.3% |
| 3922705 | 237.1.1.1 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PARP | 0.56 | 52.0 | 4.50e-01 | 99.3% | 80.5% |
| 3453008 | 237.1.1.1 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PARP | 0.56 | 48.0 | 4.14e-01 | 94.2% | 60.1% |
| 3270835 | 237.1.1.1 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PARP | 0.56 | 52.0 | 4.34e-01 | 99.3% | 84.4% |
| 4014210 | 237.1.1.0 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation | 0.55 | 51.0 | 4.22e-01 | 99.3% | 86.0% |
| 3878517 | 237.1.1.1 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PARP | 0.55 | 51.0 | 4.23e-01 | 99.3% | 79.6% |
| 3694624 | 237.1.1.1 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PARP | 0.55 | 50.0 | 4.05e-01 | 99.3% | 78.7% |
| 5039780 | 304.126.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C | 0.54 | 23.0 | 3.23e-01 | 89.1% | 81.5% |
| 3218322 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 29.0 | 3.25e-01 | 98.5% | 66.7% |
| 3749674 | 4059.1.1.1 ↗ | a+b complex topology › Serpins › Serpins › Serpins › Serpin | 0.53 | 38.0 | 2.82e-01 | 75.2% | 93.8% |
D2
high
residues 184-273