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LSDeep1_scaffold_42_prodigal-single.1__X__X__00416
Bact-VirLSDeep1_scaffold_42_prodigal-single.1__X__X__00416
Identity
- Kingdom:
- phage
Quality
91.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-113
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2xdvA03 | 3.90.930.40 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › | 0.60 | 39.0 | 3.95e-01 | 100.0% | 65.5% |
| 6at7B03 | 1.10.274.20 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Phenylalanine ammonia-lyase 1; domain 3 | 0.57 | 33.0 | 3.38e-01 | 88.0% | 56.1% |
| 2cw8A03 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.55 | 43.0 | 3.75e-01 | 83.3% | 97.0% |
| 4dwpA02 | 1.10.443.30 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Telomere resolvase | 0.55 | 45.0 | 3.64e-01 | 91.7% | 54.2% |
| 2uvaG12 | 3.30.70.3330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 42.0 | 3.96e-01 | 86.1% | 68.0% |
| 4dixA02 | 2.30.29.140 | Mainly Beta › Roll › PH-domain like › | 0.52 | 36.0 | 3.51e-01 | 73.1% | 82.4% |
| 1dynA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 36.0 | 3.58e-01 | 72.2% | 90.3% |
| 1z87A01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 36.0 | 3.70e-01 | 72.2% | 97.0% |
| 3wdoA01 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.51 | 41.0 | 2.89e-01 | 90.7% | 41.8% |
| 3a8uX01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.50 | 42.0 | 3.64e-01 | 88.9% | 78.1% |
| 1xg7A02 | 1.10.340.30 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 | 0.50 | 39.0 | 3.55e-01 | 82.4% | 69.2% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4611946 | 3281.1.1.4 ↗ | alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit L (NuoL)-related › Proton_antipo_M,Proton_antipo_N,NADH5_C | 0.53 | 42.0 | 2.71e-01 | 87.0% | 54.0% |
| 3934455 | 216.1.1.17 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › Med15_C | 0.53 | 36.0 | 3.56e-01 | 99.1% | 65.2% |
| 3386726 | 5052.1.1.1 ↗ | alpha complex topology › Proton glutamate symport protein › Proton glutamate symport protein › Proton glutamate symport protein › SDF | 0.53 | 41.0 | 2.77e-01 | 83.3% | 79.6% |
| 3933119 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.52 | 36.0 | 3.43e-01 | 72.2% | 83.1% |
| 3225748 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.50 | 32.0 | 3.35e-01 | 71.3% | 69.0% |