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LT986460.2__SPF82080.1__X__00005
Bact-VirLT986460.2__SPF82080.1__X__00005
Identity
- Accession:
- LT986460 ↗
- Kingdom:
- phage
Quality
80.9
mean pLDDT
Taxonomy
TaxID: 2055238
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-48
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5xc5A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 41.0 | 2.95e-01 | 89.6% | 89.8% |
| 1uscA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.53 | 41.0 | 2.98e-01 | 100.0% | 67.4% |
| 4r0mB01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.52 | 43.0 | 2.56e-01 | 100.0% | 17.0% |
| 1xg9A02 | 3.10.25.20 | Alpha Beta › Roll › Methionyl-tRNA Fmet Formyltransferase; Chain A, domain 2 › | 0.52 | 42.0 | 3.99e-01 | 100.0% | 95.2% |
| 2d73A01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.52 | 41.0 | 2.67e-01 | 100.0% | 49.6% |
| 1x0cA01 | 2.60.350.10 | Mainly Beta › Sandwich › Dex49a from penicillium minioluteum complex, domain 1 › Dextranase, N-terminal | 0.51 | 40.0 | 2.96e-01 | 100.0% | 73.7% |
| 3wirA03 | 2.60.420.10 | Mainly Beta › Sandwich › Maltose phosphorylase, domain 3 › Maltose phosphorylase, domain 3 | 0.51 | 37.0 | 3.53e-01 | 100.0% | 63.8% |
| 1z2aA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 37.0 | 2.77e-01 | 89.6% | 89.6% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3860874 | 11.1.1.3 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ig | 0.55 | 41.0 | 3.20e-01 | 100.0% | 32.6% |
| 4504318 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 40.0 | 3.47e-01 | 100.0% | 50.7% |
| 3487471 | 375.1.8.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Cytochrome c oxidase Subunit F | 0.54 | 40.0 | 3.42e-01 | 89.6% | 45.2% |
| 3470952 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 42.0 | 2.75e-01 | 100.0% | 32.0% |