←Back to structures
LT992259.1__SPL81302.1__X__00011
Bact-VirLT992259.1__SPL81302.1__X__00011
Identity
- Accession:
- LT992259 ↗
- Kingdom:
- phage
Quality
75.8
mean pLDDT
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-107
Domain cluster:
rep: JF974295.1__AGH57512.1__PSYG_00051__00051__D3-108
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13262.12 best | DUF4054 | 43.6 | 4.10e-11 | 94.4% | 98.1% |
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6b9sB02 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.57 | 30.0 | 3.58e-01 | 79.4% | 75.3% |
| 3fflA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.52 | 35.0 | 3.28e-01 | 100.0% | 57.9% |
| 4dq5B00 | 1.10.530.50 | Mainly Alpha › Orthogonal Bundle › Lysozyme › Peptidase U40 | 0.51 | 46.0 | 4.01e-01 | 100.0% | 86.3% |
| 8h72B01 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.51 | 43.0 | 3.20e-01 | 100.0% | 33.8% |
| 1cg5B00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.50 | 35.0 | 3.18e-01 | 70.1% | 87.2% |
| 1f8uA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.50 | 40.0 | 2.63e-01 | 88.8% | 32.2% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3916831 | 109.4.1.1198 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Meckelin | 0.55 | 40.0 | 3.01e-01 | 77.6% | 86.6% |
| 4027787 | 616.1.1.1 ↗ | alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › Ribosomal_S15 | 0.55 | 36.0 | 3.02e-01 | 86.9% | 38.9% |
| 3309955 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.53 | 39.0 | 4.01e-01 | 97.2% | 81.0% |
| 1148717 | 109.4.1.210 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_19 | 0.53 | 35.0 | 4.21e-01 | 100.0% | 97.3% |
| 2814210 | 109.4.1.1427 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_6, TPR_8, TPR_19 | 0.53 | 35.0 | 4.17e-01 | 100.0% | 96.1% |
| 4502176 | 1070.1.1.1 ↗ | alpha complex topology › CRISPR-associated endonuclease first helical domain › CRISPR-associated endonuclease Cpf1 first helical domain › CRISPR-associated endonuclease Cpf1 first helical domain › REC1 | 0.50 | 40.0 | 3.03e-01 | 88.8% | 80.7% |