LT

Euk-Vir

Raccoon-associated_polyomavirus_2

LT__YP_009357242__Raccoon-associated_polyomavirus_2__1978920

Identity

81.7 mean pLDDT

Shotokuvirae› Cossaviricota› Papovaviricetes› Sepolyvirales› Polyomaviridae› Deltapolyomavirus› Raccoon-associated_polyomavirus_2

TaxID: 1978920

View cluster (129 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-70

PDB

Domain cluster: rep: small_T_antigen__YP_007346980__Betapolyomavirus_ptedavyi__1891773__D7-77

D2 high residues 208-319

PDB

Domain cluster: rep: large_T_antigen__YP_009115503__Adelie_penguin_polyomavirus__1590650__D167-268

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02217.23 best	T_Ag_DNA_bind	105.1	3.50e-30	79.5%	93.6%

D3 high residues 337-421

PDB

Domain cluster: rep: ORF01L__YP_009252373__Marbled_eel_polyomavirus__1662286__D415-505

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF06431.17 best	Polyoma_lg_T_C	79.4	3.60e-22	100.0%	19.9%

D4 medium residues 424-462_616-707

PDB

Domain cluster: rep: large_T_antigen__YP_007195293__Alphapolyomavirus_septipanos__1891739__D391-454_582-665

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF06431.17 best	Polyoma_lg_T_C	70.6	1.70e-19	71.0%	21.3%

D5 medium residues 463-615

PDB

Domain cluster: rep: MN062720.1__QDP45567.1__SEA_FUZZBUSTER_83__00083__D568-722_747-764

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF06431.17 best	Polyoma_lg_T_C	241.9	1.70e-71	100.0%	36.7%
PF00519.24	PPV_E1_C	27.7	2.10e-06	86.9%	37.0%