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LacPavin_0818_WC40_scaffold_120392_prodigal-single.1__X__X__00009
Bact-VirLacPavin_0818_WC40_scaffold_120392_prodigal-single.1__X__X__00009
Identity
- Kingdom:
- phage
Quality
50.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 274-306_339-364
D2
medium
residues 8-100
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4llgM00 | 3.10.20.510 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › RNA polymerase inhibitor | 0.65 | 35.0 | 4.61e-01 | 90.3% | 98.0% |
| 3ajvC02 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.52 | 25.0 | 2.52e-01 | 84.9% | 40.7% |
| 3f1sB02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.51 | 29.0 | 2.99e-01 | 98.9% | 53.8% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3229807 | 822.1.1.0 ↗ | a+b two layers › GYF/BRK domain-like › GYF domain › GYF domain | 0.55 | 31.0 | 3.31e-01 | 92.5% | 62.5% |
| 5059796 | 4326.1.1.0 ↗ | a+b two layers › ERH-like › ERH-like › ERH-like | 0.54 | 31.0 | 3.53e-01 | 94.6% | 75.4% |
| 3447999 | 1.1.1.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP_2 | 0.52 | 41.0 | 3.82e-01 | 87.1% | 99.2% |
| 4072524 | 1.1.7.88 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25963 | 0.52 | 40.0 | 3.82e-01 | 98.9% | 70.9% |