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LacPavin_0818_WC40_scaffold_120392_prodigal-single.1__X__X__00035
Bact-VirLacPavin_0818_WC40_scaffold_120392_prodigal-single.1__X__X__00035
Identity
- Kingdom:
- phage
Quality
85.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 52-172
Domain cluster:
rep: JSantini_GMIN_scaffold_8_prodigal-single.1__X__X__00299__D31-130
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4g29A00 | 3.10.670.10 | Alpha Beta › Roll › Secreted effector protein ssei fold › Secreted effector protein ssei. | 0.63 | 57.0 | 5.09e-01 | 96.7% | 71.1% |
| 3d4eA01 | 3.30.1450.10 | Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › | 0.55 | 31.0 | 3.58e-01 | 75.2% | 77.4% |
| 1rtqA00 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.53 | 43.0 | 3.29e-01 | 87.6% | 49.5% |
| 2qg7B01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.50 | 34.0 | 3.70e-01 | 76.0% | 84.2% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 185758 | 219.1.1.55 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Tox-PLDMTX | 0.63 | 57.0 | 5.05e-01 | 96.7% | 71.6% |
| 3221476 | 219.1.1.97 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CEPT76_peptidase | 0.60 | 55.0 | 4.50e-01 | 100.0% | 65.9% |
| 4634055 | 219.1.1.76 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF553 | 0.58 | 50.0 | 4.28e-01 | 93.4% | 66.8% |
| 3985863 | 219.1.1.109 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Toxin_15 | 0.56 | 42.0 | 3.56e-01 | 78.5% | 86.3% |
| 3232810 | 220.1.1.49 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Carm_PH | 0.50 | 38.0 | 3.54e-01 | 80.2% | 71.0% |
| 3719044 | 219.1.1.112 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH, UCH_1 | 0.50 | 42.0 | 3.09e-01 | 91.7% | 88.0% |