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LacPavin_0818_WC40_scaffold_120392_prodigal-single.1__X__X__00081

Bact-Vir

LacPavin_0818_WC40_scaffold_120392_prodigal-single.1__X__X__00081

Identity

Kingdom:
phage

Quality

86.8 mean pLDDT

Cluster

View cluster (31 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-103
PDB
Domain cluster: rep: js4906-29-5_S40_scaffold_13_prodigal-single.1__X__X__00046__D3-97
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1wfxA02 3.20.170.30 Alpha Beta › Alpha-Beta Barrel › ADP-ribosylation fold › 0.80 69.0 7.14e-01 100.0% 97.8%
2o0pA00 3.20.170.20 Alpha Beta › Alpha-Beta Barrel › ADP-ribosylation fold › Protein of unknown function DUF952 0.75 69.0 6.52e-01 100.0% 85.1%
5mz2I00 3.30.190.10 Alpha Beta › 2-Layer Sandwich › Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase › Ribulose bisphosphate carboxylase, small subunit 0.56 39.0 3.48e-01 100.0% 51.1%
5e4sA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 35.0 3.58e-01 100.0% 68.1%
4nzdB01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 35.0 3.52e-01 100.0% 69.7%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4125268 237.1.1.4 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PTS_2-RNA 0.82 68.0 7.05e-01 95.9% 93.3%
3106804 237.1.1.4 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PTS_2-RNA 0.81 70.0 6.85e-01 100.0% 85.4%
7450 237.1.1.9 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › DUF952 0.75 69.0 6.54e-01 100.0% 85.8%
3202097 237.1.1.0 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation 0.72 65.0 5.03e-01 100.0% 71.0%