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LacPavin_0818_WC40_scaffold_120392_prodigal-single.1__X__X__00089
Bact-VirLacPavin_0818_WC40_scaffold_120392_prodigal-single.1__X__X__00089
Identity
- Kingdom:
- phage
Quality
85.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 12-64
Domain cluster:
representative
CATH (80)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2h1eA02 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.82 | 63.0 | 6.31e-01 | 83.0% | 81.8% |
| 2w38A01 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.73 | 61.0 | 3.77e-01 | 94.3% | 31.7% |
| 3tdgA01 | 3.10.450.520 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.72 | 58.0 | 5.41e-01 | 88.7% | 84.8% |
| 1pfsA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.71 | 54.0 | 4.78e-01 | 83.0% | 87.2% |
| 2xzhA00 | 2.130.10.110 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Clathrin heavy-chain terminal domain | 0.71 | 57.0 | 3.49e-01 | 92.5% | 22.1% |
| 1olzA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.71 | 58.0 | 3.40e-01 | 94.3% | 31.8% |
| 1h6hA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.71 | 52.0 | 3.86e-01 | 81.1% | 30.8% |
| 5ygbA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 58.0 | 5.07e-01 | 92.5% | 71.2% |
| 4ikbA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.70 | 52.0 | 3.97e-01 | 81.1% | 38.8% |
| 8aa9A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.69 | 52.0 | 4.08e-01 | 81.1% | 70.2% |
| 3m9qA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 60.0 | 5.41e-01 | 98.1% | 86.1% |
| 4aw8A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.69 | 59.0 | 4.10e-01 | 100.0% | 80.1% |
| 4cy8A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.69 | 53.0 | 3.41e-01 | 84.9% | 56.5% |
| 1dgsA04 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.68 | 50.0 | 4.56e-01 | 81.1% | 95.9% |
| 3kxtA00 | 2.30.30.610 | Mainly Beta › Roll › SH3 type barrels. › Chromatin protein Cren7 | 0.68 | 55.0 | 5.40e-01 | 88.7% | 91.1% |
| 6j7cA02 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.67 | 48.0 | 3.39e-01 | 77.4% | 57.0% |
| 1fvzA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.66 | 52.0 | 3.39e-01 | 90.6% | 74.3% |
| 3f1zI00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.66 | 49.0 | 3.89e-01 | 83.0% | 69.0% |
| 1vr8A00 | 3.40.1000.20 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › TM1622-like | 0.65 | 55.0 | 4.17e-01 | 98.1% | 83.0% |
| 8jx6A02 | 2.30.30.780 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 51.0 | 4.23e-01 | 90.6% | 100.0% |
| 6x6aA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.65 | 47.0 | 2.96e-01 | 75.5% | 45.6% |
| 5hc2B00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.65 | 52.0 | 3.17e-01 | 88.7% | 77.5% |
| 5bkaE01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.65 | 52.0 | 4.02e-01 | 94.3% | 90.9% |
| 3lxrF00 | 1.10.4120.20 | Mainly Alpha › Orthogonal Bundle › SopE-like GEF fold › | 0.65 | 45.0 | 3.16e-01 | 75.5% | 66.3% |
| 2k5vA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.64 | 48.0 | 4.02e-01 | 83.0% | 75.5% |
| 5c0pA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.64 | 50.0 | 3.26e-01 | 94.3% | 25.7% |
| 1floC02 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.64 | 50.0 | 3.27e-01 | 90.6% | 49.8% |
| 2rjzA02 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.64 | 51.0 | 4.23e-01 | 90.6% | 87.9% |
| 1vclA01 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.63 | 46.0 | 3.48e-01 | 83.0% | 94.6% |
| 1iyxA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.63 | 46.0 | 3.59e-01 | 79.2% | 93.6% |
| 4o8sA01 | 3.10.450.620 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › JHP933, nucleotidyltransferase-like core domain | 0.63 | 55.0 | 4.16e-01 | 98.1% | 52.8% |
| 2nlkA02 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.63 | 52.0 | 3.34e-01 | 92.5% | 34.2% |
| 1ar0A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.63 | 52.0 | 3.98e-01 | 94.3% | 86.4% |
| 3a5zB01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 53.0 | 5.04e-01 | 98.1% | 87.3% |
| 4iupA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 55.0 | 4.94e-01 | 98.1% | 88.9% |
| 2lt1A00 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.62 | 52.0 | 4.70e-01 | 98.1% | 88.0% |
| 3d9wA02 | 2.40.128.150 | Mainly Beta › Beta Barrel › Lipocalin › Cysteine proteinases | 0.62 | 47.0 | 3.92e-01 | 86.8% | 60.8% |
| 5c7qB00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.62 | 47.0 | 3.25e-01 | 83.0% | 62.8% |
| 3njaA02 | 2.10.70.100 | Mainly Beta › Ribbon › Complement Module; domain 1 › | 0.62 | 42.0 | 4.48e-01 | 71.7% | 95.7% |
| 3nuhB03 | 3.10.20.690 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.61 | 46.0 | 4.00e-01 | 90.6% | 50.6% |
| 4nzrM02 | 2.160.20.180 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.61 | 49.0 | 3.53e-01 | 96.2% | 65.8% |
| 2ckfB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.61 | 51.0 | 3.68e-01 | 100.0% | 92.4% |
| 6secA03 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.61 | 51.0 | 3.29e-01 | 98.1% | 45.8% |
| 1vqqA01 | 3.10.450.100 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › NTF2-like; domain 1 | 0.60 | 51.0 | 4.14e-01 | 100.0% | 94.5% |
| 1jkmA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.60 | 47.0 | 2.90e-01 | 88.7% | 74.6% |
| 2ciuA00 | 3.10.450.320 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Mitochondrial import inner membrane translocase subunit Tim21 | 0.60 | 47.0 | 3.80e-01 | 96.2% | 92.7% |
| 1uebA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 48.0 | 4.63e-01 | 94.3% | 88.9% |
| 4ztkA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.59 | 48.0 | 3.20e-01 | 100.0% | 28.7% |
| 1qwdB00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.59 | 49.0 | 3.58e-01 | 98.1% | 41.0% |
| 1lv9A00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.58 | 42.0 | 4.06e-01 | 81.1% | 67.2% |
| 2xe4A01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.58 | 43.0 | 2.62e-01 | 81.1% | 34.7% |
| 3ebwA01 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.58 | 48.0 | 3.68e-01 | 98.1% | 59.2% |
| 3q90B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 47.0 | 3.60e-01 | 92.5% | 84.6% |
| 2i1yA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.58 | 49.0 | 3.06e-01 | 94.3% | 30.0% |
| 3f6gA01 | 3.30.160.740 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.58 | 43.0 | 4.21e-01 | 81.1% | 100.0% |
| 3hk4A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 50.0 | 3.90e-01 | 98.1% | 85.6% |
| 3oyyA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 49.0 | 4.59e-01 | 96.2% | 86.4% |
| 2k4vA00 | 3.30.160.370 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Domain of unknown function DUF5064 | 0.57 | 47.0 | 3.74e-01 | 100.0% | 56.0% |
| 6s8zA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 48.0 | 4.65e-01 | 98.1% | 93.5% |
| 1iz6A01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 50.0 | 4.65e-01 | 100.0% | 87.0% |
| 6ruiB04 | 3.90.1110.10 | Alpha Beta › Alpha-Beta Complex › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3 › RNA polymerase Rpb2, domain 2 | 0.57 | 45.0 | 3.28e-01 | 96.2% | 29.7% |
| 2ia1A01 | 3.30.500.20 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › BH3703-like domains | 0.56 | 47.0 | 3.73e-01 | 98.1% | 52.1% |
| 4dy0B02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.56 | 44.0 | 3.44e-01 | 90.6% | 75.0% |
| 4a8jB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 45.0 | 3.10e-01 | 100.0% | 84.1% |
| 4ge6A00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.54 | 43.0 | 2.75e-01 | 92.5% | 30.4% |
| 1sr9A02 | 3.30.160.270 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Alpha-isopropylmalate synthase LeuA, regulatory domain | 0.54 | 40.0 | 2.95e-01 | 84.9% | 53.7% |
| 1lj5A02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.54 | 43.0 | 3.18e-01 | 92.5% | 93.5% |
| 4bumX00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.53 | 38.0 | 2.45e-01 | 77.4% | 14.1% |
| 4c0dB00 | 2.30.30.1020 | Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain | 0.53 | 42.0 | 2.91e-01 | 90.6% | 24.6% |
| 3b77A01 | 2.30.29.50 | Mainly Beta › Roll › PH-domain like › Bacterial Pleckstrin homology domain | 0.53 | 43.0 | 3.60e-01 | 94.3% | 51.0% |
| 2kcjA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 34.0 | 2.88e-01 | 77.4% | 33.3% |
| 4bg7A00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.52 | 36.0 | 3.16e-01 | 90.6% | 42.9% |
| 1z87A01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 39.0 | 3.34e-01 | 86.8% | 89.0% |
| 8dajA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.52 | 40.0 | 2.67e-01 | 96.2% | 32.4% |
| 5is8A02 | 2.70.160.11 | Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 | 0.51 | 39.0 | 2.79e-01 | 88.7% | 89.4% |
| 1tluA00 | 3.60.90.10 | Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase | 0.51 | 43.0 | 3.43e-01 | 100.0% | 70.9% |
| 4htgA03 | 3.30.160.40 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain | 0.51 | 41.0 | 3.76e-01 | 100.0% | 87.3% |
| 6ka3A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.51 | 39.0 | 3.06e-01 | 96.2% | 61.9% |
| 3luqB00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.51 | 36.0 | 2.90e-01 | 77.4% | 86.8% |
| 3nqzA01 | 3.10.450.490 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 39.0 | 3.49e-01 | 98.1% | 69.2% |
ECOD (87)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3212945 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.83 | 64.0 | 6.23e-01 | 83.0% | 74.6% |
| 5081844 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.77 | 57.0 | 4.35e-01 | 79.2% | 67.5% |
| 3596583 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.77 | 64.0 | 3.68e-01 | 90.6% | 48.7% |
| 3702792 | 2003.1.2.12 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › DAO | 0.76 | 63.0 | 3.66e-01 | 90.6% | 49.2% |
| 3466584 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.75 | 55.0 | 5.21e-01 | 79.2% | 96.9% |
| 3472797 | 277.1.1.0 ↗ | a+b two layers › PX domain › PX domain › PX domain | 0.75 | 55.0 | 4.07e-01 | 79.2% | 32.9% |
| 4974920 | 2.1.1.76 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 | 0.72 | 53.0 | 4.37e-01 | 81.1% | 80.0% |
| 5035149 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.72 | 53.0 | 4.42e-01 | 81.1% | 82.1% |
| 4945684 | 2.1.1.76 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 | 0.71 | 52.0 | 4.15e-01 | 81.1% | 69.6% |
| 3267978 | 331.3.1.4 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › IP_trans | 0.71 | 56.0 | 3.56e-01 | 88.7% | 70.9% |
| 3520079 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.71 | 56.0 | 4.40e-01 | 88.7% | 70.4% |
| 3706903 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.70 | 51.0 | 3.75e-01 | 79.2% | 28.8% |
| 5050059 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.70 | 52.0 | 4.10e-01 | 81.1% | 69.6% |
| 5040605 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.70 | 51.0 | 4.12e-01 | 81.1% | 71.8% |
| 3410370 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 59.0 | 5.42e-01 | 96.2% | 90.0% |
| 4618633 | 4.26.1.1 ↗ | beta barrels › SH3 › Chromatin protein Cren7 › Chromatin protein Cren7 › Cren7 | 0.69 | 56.0 | 5.46e-01 | 88.7% | 88.1% |
| 4931879 | 2.1.1.76 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 | 0.69 | 50.0 | 4.18e-01 | 81.1% | 79.0% |
| 5018521 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.68 | 57.0 | 4.98e-01 | 92.5% | 72.5% |
| 3637283 | 5.1.4.441 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Clathrin-link | 0.68 | 54.0 | 3.31e-01 | 92.5% | 21.6% |
| 3221229 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 51.0 | 5.45e-01 | 90.6% | 95.6% |
| 3221233 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.67 | 52.0 | 5.59e-01 | 90.6% | 100.0% |
| 3948020 | 283.2.1.1 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › GPW_gp25 | 0.67 | 54.0 | 4.36e-01 | 92.5% | 46.4% |
| 5020459 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.67 | 49.0 | 4.10e-01 | 81.1% | 79.8% |
| 3472467 | 284.1.3.0 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain | 0.67 | 49.0 | 4.47e-01 | 81.1% | 77.3% |
| 3605574 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.67 | 53.0 | 3.77e-01 | 90.6% | 59.4% |
| 4950462 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.66 | 53.0 | 5.16e-01 | 90.6% | 81.7% |
| 5035148 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.66 | 48.0 | 3.55e-01 | 81.1% | 52.9% |
| 4975882 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.66 | 49.0 | 3.92e-01 | 81.1% | 70.0% |
| 4586017 | 330.6.1.1 ↗ | a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer | 0.66 | 56.0 | 4.41e-01 | 98.1% | 63.5% |
| 1954221 | 2.26.1.1 ↗ | beta barrels › OB-fold › Arcadin-1 › Arcadin-1 › Arcadin_1 | 0.65 | 49.0 | 4.37e-01 | 81.1% | 90.7% |
| 4269457 | 330.6.1.1 ↗ | a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer | 0.65 | 55.0 | 4.18e-01 | 98.1% | 54.5% |
| 4028885 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.64 | 55.0 | 5.21e-01 | 98.1% | 89.2% |
| 4951394 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.64 | 47.0 | 3.94e-01 | 81.1% | 78.0% |
| 5044712 | 4272.1.1.1 ↗ | a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa | 0.64 | 46.0 | 3.51e-01 | 79.2% | 35.0% |
| 5081845 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.64 | 47.0 | 3.92e-01 | 81.1% | 79.0% |
| 4545039 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.64 | 52.0 | 4.82e-01 | 94.3% | 88.6% |
| 3659202 | 1.1.11.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain | 0.64 | 45.0 | 3.97e-01 | 77.4% | 50.0% |
| 5050058 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.64 | 46.0 | 3.33e-01 | 81.1% | 46.3% |
| 4041586 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.63 | 54.0 | 5.12e-01 | 98.1% | 89.2% |
| 2126 | 6.1.1.4 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › Ricin_B_lectin | 0.63 | 46.0 | 3.47e-01 | 83.0% | 94.0% |
| 4393617 | 330.6.1.1 ↗ | a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer | 0.63 | 53.0 | 4.13e-01 | 100.0% | 60.8% |
| 4101580 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.63 | 53.0 | 5.05e-01 | 98.1% | 89.2% |
| 4675864 | 207.12.1.2 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Protein M antibody-binding region › Protein M antibody-binding region › M_large_dom | 0.63 | 49.0 | 3.03e-01 | 90.6% | 34.2% |
| 4393122 | 330.6.1.1 ↗ | a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer | 0.63 | 51.0 | 4.06e-01 | 98.1% | 55.2% |
| 3914493 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.63 | 51.0 | 2.94e-01 | 92.5% | 14.8% |
| 3867704 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.63 | 51.0 | 3.22e-01 | 92.5% | 28.7% |
| 3590766 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.62 | 44.0 | 3.44e-01 | 73.6% | 40.0% |
| 4609098 | 330.6.1.1 ↗ | a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer | 0.62 | 50.0 | 3.91e-01 | 98.1% | 52.6% |
| 4419948 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.62 | 53.0 | 5.02e-01 | 98.1% | 89.2% |
| 4213539 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.62 | 53.0 | 5.01e-01 | 98.1% | 89.2% |
| 4982529 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.62 | 46.0 | 4.74e-01 | 84.9% | 96.0% |
| 3306779 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.61 | 51.0 | 4.84e-01 | 94.3% | 86.2% |
| 4284764 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.61 | 52.0 | 4.93e-01 | 98.1% | 89.2% |
| 4038269 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.61 | 50.0 | 4.75e-01 | 94.3% | 86.2% |
| 4292289 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.61 | 52.0 | 4.95e-01 | 98.1% | 89.2% |
| 4158157 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.61 | 51.0 | 4.81e-01 | 94.3% | 86.2% |
| 4345080 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.61 | 51.0 | 4.87e-01 | 98.1% | 89.2% |
| 3590827 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.61 | 52.0 | 4.89e-01 | 98.1% | 87.7% |
| 4135259 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.61 | 52.0 | 4.88e-01 | 98.1% | 89.2% |
| 842 | 9.1.1.11 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin_2 | 0.60 | 50.0 | 3.65e-01 | 98.1% | 40.7% |
| 3686955 | 2486.1.1.1 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › ECH_1 | 0.60 | 46.0 | 2.91e-01 | 83.0% | 75.6% |
| 5023892 | 330.6.1.1 ↗ | a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer | 0.60 | 43.0 | 3.37e-01 | 81.1% | 65.9% |
| 4104219 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.59 | 52.0 | 4.90e-01 | 100.0% | 89.2% |
| 4037383 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.59 | 50.0 | 4.74e-01 | 98.1% | 83.1% |
| 4391625 | 330.6.1.1 ↗ | a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer | 0.59 | 47.0 | 3.93e-01 | 98.1% | 63.6% |
| 4446791 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.59 | 50.0 | 4.78e-01 | 98.1% | 89.2% |
| 5064787 | 316.1.1.18 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › AbiEii | 0.59 | 48.0 | 3.10e-01 | 96.2% | 31.4% |
| 4146937 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.58 | 50.0 | 4.75e-01 | 98.1% | 89.2% |
| 5066122 | 264.2.1.0 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain | 0.58 | 42.0 | 3.78e-01 | 81.1% | 68.8% |
| 3265170 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.58 | 49.0 | 4.64e-01 | 98.1% | 83.1% |
| 3608236 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.58 | 48.0 | 4.60e-01 | 98.1% | 83.1% |
| 4086925 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.58 | 50.0 | 4.72e-01 | 98.1% | 86.2% |
| 4201878 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.58 | 49.0 | 4.65e-01 | 98.1% | 89.2% |
| 4051625 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.58 | 50.0 | 4.72e-01 | 98.1% | 89.2% |
| 142633 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.58 | 49.0 | 4.59e-01 | 96.2% | 86.4% |
| 5018715 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.57 | 44.0 | 4.31e-01 | 90.6% | 91.7% |
| 3389626 | 4292.2.1.0 ↗ | a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain | 0.56 | 46.0 | 4.24e-01 | 100.0% | 77.3% |
| 4524363 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.55 | 47.0 | 4.46e-01 | 98.1% | 87.7% |
| 3615124 | 5.1.3.28 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_3 | 0.55 | 44.0 | 2.77e-01 | 100.0% | 22.1% |
| 5008812 | 264.2.1.0 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain | 0.55 | 41.0 | 3.43e-01 | 86.8% | 77.1% |
| 3270561 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.54 | 44.0 | 2.83e-01 | 94.3% | 29.0% |
| 4266402 | 3692.1.1.1 ↗ | a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › OCD_Mu_crystall | 0.52 | 38.0 | 3.04e-01 | 84.9% | 72.8% |
| 4623684 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.51 | 44.0 | 3.29e-01 | 98.1% | 40.7% |
| 5050697 | 375.1.1.21 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ZPR1 | 0.51 | 39.0 | 4.06e-01 | 90.6% | 94.0% |
| 4054729 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.51 | 40.0 | 3.75e-01 | 100.0% | 85.3% |
| 5053256 | 331.9.1.0 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain | 0.51 | 39.0 | 3.07e-01 | 88.7% | 37.6% |
| 4950072 | 3692.1.1.1 ↗ | a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › OCD_Mu_crystall | 0.50 | 41.0 | 3.29e-01 | 100.0% | 51.2% |
D2
high
residues 359-407
Domain cluster:
rep: IMGVR_UViG_3300021426_000003-3300021426-Ga0224482_10000072181__D164-213
D3
high
residues 426-474
Domain cluster:
rep: IMGVR_UViG_3300021426_000003-3300021426-Ga0224482_10000072181__D164-213
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1u3eM02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.90 | 82.0 | 7.21e-01 | 100.0% | 70.6% |
| 5yc9B01 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.81 | 47.0 | 3.66e-01 | 71.4% | 28.9% |
| 2mtzA01 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.60 | 45.0 | 4.54e-01 | 81.6% | 96.0% |
| 1e0gA00 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.56 | 40.0 | 4.05e-01 | 79.6% | 100.0% |
| 3h5tA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.53 | 45.0 | 4.58e-01 | 100.0% | 100.0% |
| 3ikwA02 | 3.10.540.20 | Alpha Beta › Roll › duf1285 like fold › | 0.50 | 42.0 | 3.82e-01 | 100.0% | 95.7% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2876 | 101.1.14.2 ↗ | alpha arrays › HTH › HTH › DNA-binding domain of intron-encoded endonucleases › I-HmuI_NUMOD-like | 0.90 | 82.0 | 7.17e-01 | 100.0% | 69.6% |
| 4414927 | 101.1.14.3 ↗ | alpha arrays › HTH › HTH › DNA-binding domain of intron-encoded endonucleases › NUMOD1 | 0.86 | 77.0 | 6.84e-01 | 100.0% | 71.0% |
| 3171408 | 101.1.14.3 ↗ | alpha arrays › HTH › HTH › DNA-binding domain of intron-encoded endonucleases › NUMOD1 | 0.84 | 73.0 | 7.35e-01 | 98.0% | 96.0% |
| 4384880 | 101.1.14.3 ↗ | alpha arrays › HTH › HTH › DNA-binding domain of intron-encoded endonucleases › NUMOD1 | 0.84 | 74.0 | 6.18e-01 | 100.0% | 58.8% |
| 3587703 | 101.1.14.0 ↗ | alpha arrays › HTH › HTH › DNA-binding domain of intron-encoded endonucleases | 0.83 | 72.0 | 7.19e-01 | 100.0% | 94.0% |
| 3720958 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.64 | 51.0 | 5.07e-01 | 85.7% | 96.0% |
| 3240617 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.58 | 45.0 | 4.22e-01 | 85.7% | 88.3% |
| 5047478 | 6058.1.1.1 ↗ | alpha arrays › C-terminal alpha domain in Alpha-Glycerophosphate Oxidase › C-terminal alpha domain in Alpha-Glycerophosphate Oxidase › C-terminal alpha domain in Alpha-Glycerophosphate Oxidase › DAO_C | 0.52 | 42.0 | 3.14e-01 | 91.8% | 48.5% |
D4
medium
residues 81-138
Domain cluster:
rep: MT104122.1__QIG62564.1__X__00050__D171-224
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF14311.13 best | DUF4379 | 59.2 | 5.10e-16 | 87.9% | 91.1% |
D5
medium
residues 145-262
Domain cluster:
rep: LacPavin_0818_WC40_scaffold_193576_prodigal-single.1__X__X__00294__D106-220
CATH (51)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3votA01 | 3.40.50.20 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.71 | 45.0 | 4.80e-01 | 81.4% | 74.3% |
| 5dn8A02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.65 | 59.0 | 5.31e-01 | 100.0% | 94.5% |
| 3regA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.65 | 57.0 | 5.05e-01 | 96.6% | 91.2% |
| 2a1iA01 | 3.40.50.10130 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.65 | 54.0 | 5.50e-01 | 100.0% | 91.5% |
| 2kx7A00 | 3.40.50.11620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphotransferase RcsD, RcsD-ABL domain | 0.64 | 45.0 | 4.70e-01 | 100.0% | 77.5% |
| 1j24A00 | 3.40.50.10130 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.63 | 57.0 | 5.53e-01 | 100.0% | 94.0% |
| 6nazA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.63 | 56.0 | 5.14e-01 | 98.3% | 93.6% |
| 2bgwB01 | 3.40.50.10130 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.63 | 57.0 | 5.53e-01 | 100.0% | 93.9% |
| 5tebG00 | 3.40.50.10140 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Toll/interleukin-1 receptor homology (TIR) domain | 0.63 | 56.0 | 5.12e-01 | 99.2% | 94.3% |
| 1u7zC00 | 3.40.50.10300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › CoaB-like | 0.63 | 56.0 | 4.59e-01 | 99.2% | 93.2% |
| 2cb0A02 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.63 | 55.0 | 5.11e-01 | 100.0% | 75.7% |
| 3fkqA01 | 3.40.50.10850 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Ntrc-like two-domain protein. | 0.62 | 50.0 | 5.03e-01 | 99.2% | 87.9% |
| 3ljsA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.62 | 55.0 | 4.07e-01 | 99.2% | 81.5% |
| 7vm0A02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.61 | 54.0 | 4.95e-01 | 98.3% | 79.6% |
| 2amlA02 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.60 | 54.0 | 5.08e-01 | 100.0% | 79.6% |
| 3dmyA02 | 3.40.50.261 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Succinyl-CoA synthetase domains | 0.60 | 54.0 | 5.14e-01 | 100.0% | 85.7% |
| 4s1wB02 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.60 | 53.0 | 4.99e-01 | 100.0% | 79.5% |
| 3oqpA00 | 3.40.50.850 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Isochorismatase-like | 0.60 | 53.0 | 4.39e-01 | 97.5% | 86.5% |
| 6w6aA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.59 | 48.0 | 3.77e-01 | 87.3% | 87.1% |
| 3ihjA03 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.59 | 53.0 | 4.19e-01 | 100.0% | 62.2% |
| 3fj1A02 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.59 | 50.0 | 4.81e-01 | 95.8% | 81.6% |
| 3b5vA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.59 | 51.0 | 4.02e-01 | 94.9% | 90.7% |
| 4h17A00 | 3.40.50.850 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Isochorismatase-like | 0.58 | 50.0 | 4.20e-01 | 92.4% | 84.8% |
| 7bobA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.58 | 47.0 | 3.39e-01 | 87.3% | 80.3% |
| 4nf7A00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.58 | 46.0 | 3.31e-01 | 86.4% | 83.7% |
| 3ezsA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.58 | 52.0 | 4.15e-01 | 99.2% | 58.9% |
| 7q1bA01 | 3.40.800.20 | Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Histone deacetylase domain | 0.58 | 52.0 | 3.65e-01 | 100.0% | 92.3% |
| 3u31A01 | 3.40.50.1220 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TPP-binding domain | 0.57 | 47.0 | 4.29e-01 | 91.5% | 76.2% |
| 4q6jB00 | 3.20.20.450 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain | 0.57 | 45.0 | 3.59e-01 | 84.7% | 88.7% |
| 1jphA00 | 3.20.20.210 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › | 0.57 | 45.0 | 3.28e-01 | 85.6% | 89.6% |
| 1h3fA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.57 | 39.0 | 3.40e-01 | 71.2% | 79.5% |
| 3r4vA01 | 3.40.50.1440 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain | 0.56 | 50.0 | 3.81e-01 | 100.0% | 57.4% |
| 3nqbA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.56 | 48.0 | 3.82e-01 | 94.1% | 98.0% |
| 3v46A00 | 3.40.50.11990 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › RNA polymerase II accessory factor, Cdc73 C-terminal domain | 0.56 | 51.0 | 4.60e-01 | 100.0% | 88.7% |
| 3av0A01 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.56 | 48.0 | 3.84e-01 | 96.6% | 91.2% |
| 3mcwA00 | 3.40.50.850 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Isochorismatase-like | 0.56 | 50.0 | 4.25e-01 | 100.0% | 91.8% |
| 3f4wA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.55 | 46.0 | 3.82e-01 | 90.7% | 95.7% |
| 8bc3B01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.55 | 44.0 | 3.67e-01 | 86.4% | 85.5% |
| 1pz1A00 | 3.20.20.100 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain | 0.55 | 44.0 | 3.24e-01 | 87.3% | 78.0% |
| 1mrzA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.54 | 40.0 | 3.67e-01 | 82.2% | 58.2% |
| 1ynsA01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.54 | 47.0 | 4.38e-01 | 94.9% | 86.0% |
| 1kjqA01 | 3.40.50.20 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 39.0 | 3.96e-01 | 76.3% | 76.0% |
| 2o2xA01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.53 | 44.0 | 3.66e-01 | 88.1% | 59.0% |
| 1d4oA00 | 3.40.50.1220 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TPP-binding domain | 0.53 | 43.0 | 3.79e-01 | 88.1% | 71.8% |
| 1xdwA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 47.0 | 3.95e-01 | 97.5% | 70.1% |
| 4s2rP02 | 3.40.350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Creatine Amidinohydrolase; Chain A, domain 1 › Creatinase/prolidase N-terminal domain | 0.52 | 42.0 | 3.84e-01 | 85.6% | 86.1% |
| 1dxyA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 46.0 | 3.93e-01 | 97.5% | 69.9% |
| 2g80A01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.52 | 44.0 | 4.11e-01 | 91.5% | 93.9% |
| 2l5oA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.51 | 39.0 | 3.66e-01 | 83.1% | 65.3% |
| 3n05A02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.50 | 40.0 | 3.46e-01 | 86.4% | 70.9% |
| 4wnyA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.50 | 38.0 | 3.73e-01 | 81.4% | 78.0% |
ECOD (72)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5038840 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.87 | 65.0 | 7.10e-01 | 96.6% | 92.0% |
| 5028457 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.84 | 67.0 | 6.32e-01 | 94.9% | 70.7% |
| 5074968 | 2008.1.1.122 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DpnII-MboI | 0.82 | 64.0 | 5.95e-01 | 81.4% | 77.9% |
| 3948428 | 2008.1.1.122 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DpnII-MboI | 0.82 | 63.0 | 5.79e-01 | 80.5% | 78.0% |
| 3959070 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.81 | 68.0 | 6.18e-01 | 100.0% | 68.7% |
| 3958985 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.81 | 66.0 | 7.11e-01 | 98.3% | 100.0% |
| 4940595 | 2008.1.1.14 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Vsr | 0.81 | 61.0 | 6.63e-01 | 95.8% | 93.0% |
| 4999525 | 2008.1.1.16 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat | 0.80 | 74.0 | 6.36e-01 | 98.3% | 89.7% |
| 5010735 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.79 | 73.0 | 6.75e-01 | 98.3% | 95.9% |
| 3287888 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.78 | 64.0 | 5.50e-01 | 85.6% | 68.6% |
| 4984120 | 2008.1.1.17 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF559 | 0.78 | 65.0 | 6.92e-01 | 98.3% | 100.0% |
| 5074941 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.77 | 68.0 | 7.09e-01 | 100.0% | 100.0% |
| 4928387 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.77 | 59.0 | 5.21e-01 | 78.8% | 77.3% |
| 3223694 | 2008.1.1.94 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF5614 | 0.77 | 59.0 | 5.09e-01 | 79.7% | 63.4% |
| 4997775 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.75 | 65.0 | 6.72e-01 | 100.0% | 97.3% |
| 4930910 | 2008.1.1.219 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF790 | 0.75 | 68.0 | 6.74e-01 | 99.2% | 96.0% |
| 5025033 | 2008.1.1.219 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF790 | 0.74 | 54.0 | 6.10e-01 | 83.1% | 100.0% |
| 5080733 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.74 | 66.0 | 6.35e-01 | 97.5% | 85.4% |
| 3235677 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.74 | 60.0 | 6.03e-01 | 85.6% | 98.3% |
| 4955559 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.73 | 58.0 | 5.80e-01 | 83.9% | 99.2% |
| 4946571 | 2008.1.1.85 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RE_TdeIII | 0.72 | 63.0 | 5.20e-01 | 93.2% | 62.4% |
| 4946865 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.72 | 60.0 | 6.20e-01 | 89.0% | 100.0% |
| 3281852 | 2008.1.1.14 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Vsr | 0.72 | 66.0 | 6.12e-01 | 100.0% | 79.3% |
| 3258001 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.71 | 65.0 | 6.10e-01 | 96.6% | 92.9% |
| 4983302 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.70 | 64.0 | 6.02e-01 | 99.2% | 91.4% |
| 4975459 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.70 | 63.0 | 5.75e-01 | 98.3% | 87.1% |
| 5080532 | 2008.4.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › TBP-interacting protein N-terminal domain-like › TBP-interacting protein N-terminal domain-like | 0.70 | 57.0 | 5.91e-01 | 97.5% | 95.4% |
| 4956059 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.69 | 54.0 | 4.83e-01 | 82.2% | 72.7% |
| 5076295 | 2008.1.1.107 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NERD | 0.69 | 62.0 | 5.93e-01 | 98.3% | 99.3% |
| 4960251 | 2008.1.1.16 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat | 0.69 | 62.0 | 5.98e-01 | 98.3% | 91.7% |
| 4970960 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.69 | 61.0 | 5.60e-01 | 98.3% | 87.1% |
| 3196217 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.68 | 61.0 | 4.68e-01 | 100.0% | 59.9% |
| 4222489 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.68 | 56.0 | 5.81e-01 | 98.3% | 95.4% |
| 4947569 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.68 | 60.0 | 5.49e-01 | 96.6% | 83.2% |
| 5079137 | 2008.1.1.16 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat | 0.68 | 60.0 | 5.71e-01 | 97.5% | 97.9% |
| 5010842 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.67 | 59.0 | 5.34e-01 | 94.1% | 81.3% |
| 4937745 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.67 | 58.0 | 5.70e-01 | 100.0% | 88.0% |
| 4945220 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.67 | 58.0 | 5.83e-01 | 97.5% | 92.5% |
| 4941691 | 2008.1.1.16 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat | 0.67 | 60.0 | 5.51e-01 | 98.3% | 81.2% |
| 5056125 | 2008.1.1.14 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Vsr | 0.67 | 63.0 | 6.09e-01 | 100.0% | 90.8% |
| 4932970 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.67 | 56.0 | 5.86e-01 | 95.8% | 100.0% |
| 5053093 | 2008.1.1.236 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PF27126 | 0.67 | 59.0 | 5.25e-01 | 96.6% | 95.2% |
| 5075254 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.66 | 60.0 | 5.21e-01 | 100.0% | 89.4% |
| 3895050 | 2008.1.1.7 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 | 0.65 | 59.0 | 5.26e-01 | 100.0% | 77.1% |
| 4027941 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.65 | 50.0 | 5.54e-01 | 81.4% | 100.0% |
| 3265349 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.65 | 58.0 | 4.93e-01 | 100.0% | 84.4% |
| 4931386 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.65 | 52.0 | 5.52e-01 | 97.5% | 98.1% |
| 4948137 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.65 | 58.0 | 5.13e-01 | 100.0% | 89.7% |
| 5081860 | 2003.1.1.51 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DFP | 0.64 | 58.0 | 4.76e-01 | 100.0% | 94.9% |
| 3550235 | 2007.1.3.34 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › PDE8A_N | 0.64 | 57.0 | 5.31e-01 | 99.2% | 80.7% |
| 5026996 | 2003.1.1.51 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DFP | 0.62 | 55.0 | 4.53e-01 | 98.3% | 94.9% |
| 5076121 | 2007.6.1.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › SIS | 0.62 | 55.0 | 4.73e-01 | 100.0% | 62.7% |
| 3863359 | 2007.9.1.5 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain › TIR_3 | 0.61 | 55.0 | 5.36e-01 | 100.0% | 93.1% |
| 3689973 | 2006.1.6.4 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › Ku_N | 0.60 | 50.0 | 4.16e-01 | 89.8% | 96.2% |
| 3403539 | 7512.1.1.1 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDPGT | 0.60 | 53.0 | 4.01e-01 | 99.2% | 89.3% |
| 3713276 | 2006.1.6.4 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › Ku_N | 0.60 | 50.0 | 4.18e-01 | 92.4% | 97.2% |
| 5074119 | 2003.1.1.51 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DFP | 0.60 | 54.0 | 4.30e-01 | 100.0% | 89.8% |
| 3411027 | 7512.1.1.1 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDPGT | 0.59 | 52.0 | 3.96e-01 | 99.2% | 86.7% |
| 1348880 | 2008.1.1.74 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PvuRts1I-like_N | 0.59 | 50.0 | 4.82e-01 | 100.0% | 79.6% |
| 3987846 | 2002.1.1.50 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › F_bP_aldolase | 0.59 | 50.0 | 3.73e-01 | 91.5% | 92.8% |
| 5002908 | 7586.1.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like domain in prismane-like proteins › Rossmann-like domain in prismane-like proteins › Rossmann-like domain in prismane-like proteins › Prismane | 0.58 | 52.0 | 4.59e-01 | 100.0% | 77.7% |
| 4659236 | 2003.1.4.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › DHS-like NAD/FAD-binding domain › SIR2 | 0.58 | 50.0 | 3.95e-01 | 95.8% | 90.0% |
| 4972050 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.57 | 46.0 | 3.11e-01 | 87.3% | 74.0% |
| 4563833 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.56 | 43.0 | 3.15e-01 | 83.9% | 54.3% |
| 4309113 | 2003.1.4.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › DHS-like NAD/FAD-binding domain | 0.56 | 46.0 | 3.65e-01 | 89.8% | 83.2% |
| 4969542 | 300.1.1.6 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › Regulator_TrmB | 0.56 | 41.0 | 3.83e-01 | 77.1% | 99.3% |
| 4313486 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.54 | 46.0 | 4.36e-01 | 94.9% | 97.2% |
| 3977807 | 2002.5.1.1 ↗ | a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL | 0.54 | 44.0 | 3.86e-01 | 89.8% | 89.1% |
| 4114740 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.53 | 41.0 | 3.47e-01 | 84.7% | 98.1% |
| 4339836 | 2006.1.4.17 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › DUF188 | 0.52 | 46.0 | 4.32e-01 | 100.0% | 95.9% |
| 3391355 | 7512.1.1.1 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDPGT | 0.51 | 42.0 | 3.30e-01 | 89.8% | 95.3% |
| 3394430 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.51 | 43.0 | 3.32e-01 | 94.1% | 86.4% |
D6
medium
residues 298-335
Domain cluster:
representative
CATH (65)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ulqB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.92 | 79.0 | 6.81e-01 | 100.0% | 62.1% |
| 4go1A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.91 | 80.0 | 7.06e-01 | 100.0% | 68.5% |
| 3vfzB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.90 | 80.0 | 6.64e-01 | 100.0% | 58.7% |
| 6jqsA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.90 | 77.0 | 6.33e-01 | 100.0% | 53.7% |
| 6hn7B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.90 | 61.0 | 4.81e-01 | 71.1% | 37.5% |
| 5f64A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.90 | 76.0 | 6.01e-01 | 100.0% | 48.0% |
| 3hugA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.89 | 80.0 | 6.16e-01 | 100.0% | 47.5% |
| 4nqwA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.89 | 79.0 | 6.62e-01 | 100.0% | 59.4% |
| 6uglB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.89 | 75.0 | 6.50e-01 | 100.0% | 62.1% |
| 3p7nA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.88 | 76.0 | 6.05e-01 | 100.0% | 50.0% |
| 4gvpA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.88 | 76.0 | 4.68e-01 | 100.0% | 18.0% |
| 1a04A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.88 | 75.0 | 5.83e-01 | 100.0% | 45.0% |
| 6v7xB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.88 | 75.0 | 6.54e-01 | 100.0% | 64.3% |
| 1ku3A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.88 | 78.0 | 6.65e-01 | 100.0% | 67.2% |
| 5fgmA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.88 | 77.0 | 6.36e-01 | 100.0% | 56.9% |
| 1s7oB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.88 | 79.0 | 5.61e-01 | 100.0% | 36.2% |
| 1rp3G02 | 1.20.140.160 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain | 0.87 | 77.0 | 5.13e-01 | 100.0% | 26.8% |
| 6cc0A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.87 | 73.0 | 5.95e-01 | 100.0% | 51.4% |
| 2o8xA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.87 | 76.0 | 6.43e-01 | 100.0% | 60.7% |
| 2x48A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.87 | 72.0 | 6.39e-01 | 100.0% | 64.8% |
| 3t0yA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.84 | 72.0 | 6.22e-01 | 100.0% | 61.7% |
| 2lfwA01 | 1.20.140.160 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain | 0.84 | 70.0 | 4.74e-01 | 100.0% | 26.2% |
| 2r0qC02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.84 | 69.0 | 6.12e-01 | 100.0% | 63.6% |
| 2elhA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.84 | 70.0 | 5.82e-01 | 100.0% | 54.5% |
| 2qlzA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 73.0 | 6.16e-01 | 100.0% | 60.3% |
| 1gdtB03 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.82 | 67.0 | 6.43e-01 | 100.0% | 80.0% |
| 4nvsA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.80 | 63.0 | 4.23e-01 | 97.4% | 22.6% |
| 2h09A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.80 | 67.0 | 5.56e-01 | 100.0% | 60.6% |
| 3tgnB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 66.0 | 5.70e-01 | 100.0% | 58.7% |
| 1biaA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 69.0 | 5.77e-01 | 100.0% | 59.4% |
| 3onqA03 | 1.10.10.2840 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PucR C-terminal helix-turn-helix domain | 0.78 | 67.0 | 4.60e-01 | 100.0% | 28.2% |
| 2w7nA00 | 1.10.10.2690 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.78 | 65.0 | 4.90e-01 | 100.0% | 39.4% |
| 2ia0A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 68.0 | 6.08e-01 | 100.0% | 70.4% |
| 1lvaA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 64.0 | 5.60e-01 | 100.0% | 66.1% |
| 1r69A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.77 | 65.0 | 5.50e-01 | 94.7% | 61.9% |
| 1on2A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 68.0 | 5.48e-01 | 100.0% | 58.3% |
| 3f51C00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.77 | 64.0 | 4.85e-01 | 94.7% | 41.1% |
| 2e18A00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.77 | 64.0 | 3.87e-01 | 100.0% | 14.5% |
| 4ybaA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.76 | 65.0 | 5.24e-01 | 100.0% | 50.6% |
| 5z4zC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 63.0 | 4.89e-01 | 100.0% | 42.0% |
| 4nb5B01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 67.0 | 5.12e-01 | 100.0% | 47.1% |
| 5exvC00 | 3.40.1570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains | 0.76 | 64.0 | 4.19e-01 | 97.4% | 22.4% |
| 3k9tA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 62.0 | 5.29e-01 | 100.0% | 56.1% |
| 1z05A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 65.0 | 5.31e-01 | 100.0% | 52.8% |
| 1u8bA02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.75 | 62.0 | 5.43e-01 | 100.0% | 63.9% |
| 1c0wA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 60.0 | 5.05e-01 | 100.0% | 61.6% |
| 2xi8A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.74 | 62.0 | 5.17e-01 | 94.7% | 87.9% |
| 2p5vA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 61.0 | 5.57e-01 | 100.0% | 71.2% |
| 2isyA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 62.0 | 4.27e-01 | 100.0% | 30.4% |
| 7pzaA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 63.0 | 4.86e-01 | 100.0% | 59.3% |
| 3kxaA02 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.73 | 60.0 | 5.06e-01 | 94.7% | 90.9% |
| 1ft9A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 61.0 | 4.92e-01 | 100.0% | 64.6% |
| 2di3A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 64.0 | 5.06e-01 | 100.0% | 60.0% |
| 2mqkA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.72 | 60.0 | 5.05e-01 | 94.7% | 60.0% |
| 2gloA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.72 | 57.0 | 5.18e-01 | 100.0% | 67.8% |
| 2k9qA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.72 | 59.0 | 5.89e-01 | 94.7% | 92.5% |
| 7vjmB01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.71 | 60.0 | 5.13e-01 | 97.4% | 60.9% |
| 2x26A01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.71 | 62.0 | 3.94e-01 | 100.0% | 73.0% |
| 1b0nA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.71 | 57.0 | 4.29e-01 | 97.4% | 35.9% |
| 4rocA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.70 | 56.0 | 4.31e-01 | 100.0% | 38.8% |
| 3i71B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 51.0 | 4.54e-01 | 81.6% | 53.4% |
| 7dvrA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 57.0 | 4.00e-01 | 100.0% | 28.4% |
| 3k69A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 55.0 | 3.80e-01 | 100.0% | 26.7% |
| 7u32G01 | 1.10.10.200 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain | 0.64 | 48.0 | 4.43e-01 | 94.7% | 62.5% |
| 3b7hA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.61 | 47.0 | 3.92e-01 | 94.7% | 53.9% |
ECOD (89)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5058447 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.99 | 88.0 | 7.58e-01 | 94.7% | 65.5% |
| 5027602 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.98 | 90.0 | 7.81e-01 | 100.0% | 69.1% |
| 4938253 | 101.1.1.9 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_3 | 0.97 | 84.0 | 8.33e-01 | 94.7% | 90.0% |
| 5027601 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.96 | 87.0 | 7.38e-01 | 100.0% | 63.3% |
| 4577850 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.92 | 82.0 | 5.88e-01 | 100.0% | 37.4% |
| 5023952 | 101.1.2.888 ↗ | alpha arrays › HTH › HTH › winged helix domain › Sigma70_r4_2 | 0.92 | 81.0 | 6.53e-01 | 100.0% | 52.9% |
| 4340270 | 101.1.2.5 ↗ | alpha arrays › HTH › HTH › winged helix domain › Crp | 0.92 | 81.0 | 7.65e-01 | 100.0% | 82.2% |
| 3587538 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.92 | 81.0 | 6.57e-01 | 100.0% | 54.4% |
| 4279016 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.92 | 81.0 | 6.23e-01 | 100.0% | 46.3% |
| 4520564 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.92 | 83.0 | 6.31e-01 | 100.0% | 46.3% |
| 3969641 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.92 | 81.0 | 6.21e-01 | 100.0% | 46.3% |
| None | — | 0.92 | 83.0 | 4.95e-01 | 100.0% | 15.5% | |
| 4238054 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.92 | 84.0 | 4.95e-01 | 100.0% | 15.5% |
| 3941764 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.92 | 81.0 | 6.67e-01 | 100.0% | 56.9% |
| 3284461 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.91 | 83.0 | 4.90e-01 | 100.0% | 15.2% |
| 3288971 | 101.1.1.30 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 | 0.91 | 82.0 | 5.35e-01 | 100.0% | 25.3% |
| 4139052 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.91 | 78.0 | 6.13e-01 | 100.0% | 48.0% |
| 3971149 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.91 | 81.0 | 6.19e-01 | 100.0% | 46.3% |
| 4237551 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.91 | 81.0 | 5.87e-01 | 100.0% | 38.9% |
| 3968864 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.91 | 78.0 | 6.14e-01 | 100.0% | 48.0% |
| 2330636 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.91 | 79.0 | 7.08e-01 | 100.0% | 69.8% |
| 3947091 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.91 | 78.0 | 6.60e-01 | 100.0% | 60.0% |
| 3974736 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.90 | 82.0 | 6.16e-01 | 100.0% | 44.7% |
| 2817645 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.90 | 81.0 | 6.24e-01 | 100.0% | 47.5% |
| 3967675 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.90 | 80.0 | 7.23e-01 | 100.0% | 74.0% |
| 3284469 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.90 | 79.0 | 6.22e-01 | 100.0% | 49.3% |
| 4202221 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.90 | 81.0 | 6.58e-01 | 100.0% | 55.9% |
| 4233279 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.90 | 82.0 | 4.87e-01 | 100.0% | 15.8% |
| 4863786 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 0.90 | 79.0 | 6.90e-01 | 100.0% | 67.3% |
| None | — | 0.90 | 80.0 | 5.70e-01 | 100.0% | 36.2% | |
| 4372550 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.90 | 79.0 | 5.86e-01 | 100.0% | 41.1% |
| 3946049 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.90 | 78.0 | 7.14e-01 | 100.0% | 74.0% |
| 3786618 | 101.1.1.201 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Bot1p | 0.90 | 78.0 | 5.33e-01 | 100.0% | 29.8% |
| 4530655 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.90 | 79.0 | 5.68e-01 | 100.0% | 37.0% |
| 4304581 | 101.1.1.26 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › UPF0122 | 0.90 | 79.0 | 5.86e-01 | 100.0% | 40.4% |
| None | — | 0.89 | 79.0 | 5.59e-01 | 100.0% | 34.5% | |
| 4497189 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.89 | 81.0 | 6.65e-01 | 100.0% | 58.5% |
| 3972638 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.89 | 78.0 | 6.45e-01 | 100.0% | 56.9% |
| 2448404 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.89 | 78.0 | 6.63e-01 | 100.0% | 61.7% |
| 3967026 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.89 | 78.0 | 6.17e-01 | 100.0% | 49.3% |
| 4334910 | 101.1.1.107 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF134 | 0.89 | 77.0 | 5.26e-01 | 100.0% | 29.6% |
| 3281471 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.89 | 78.0 | 6.02e-01 | 100.0% | 46.3% |
| 3972713 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.89 | 78.0 | 5.72e-01 | 100.0% | 38.9% |
| 3279913 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.89 | 77.0 | 4.79e-01 | 100.0% | 19.5% |
| 4947436 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.89 | 78.0 | 6.85e-01 | 100.0% | 67.3% |
| 3975610 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.89 | 75.0 | 6.10e-01 | 100.0% | 51.4% |
| 3951829 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.89 | 80.0 | 6.05e-01 | 100.0% | 44.7% |
| 3860590 | 101.1.1.101 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_40 | 0.89 | 77.0 | 7.00e-01 | 100.0% | 74.0% |
| 4944726 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.89 | 79.0 | 6.73e-01 | 100.0% | 63.3% |
| 3967748 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.88 | 77.0 | 5.88e-01 | 100.0% | 43.5% |
| 5028064 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.88 | 76.0 | 5.18e-01 | 100.0% | 28.5% |
| 3590541 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.88 | 75.0 | 4.74e-01 | 100.0% | 20.0% |
| 4492035 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.88 | 75.0 | 6.06e-01 | 100.0% | 51.4% |
| 3971395 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.88 | 77.0 | 6.09e-01 | 100.0% | 49.3% |
| 4244028 | 101.1.1.107 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF134 | 0.88 | 77.0 | 6.55e-01 | 100.0% | 61.7% |
| 3977260 | 101.1.1.39 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Phage_antitermQ | 0.88 | 77.0 | 5.35e-01 | 100.0% | 31.7% |
| 5002651 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.88 | 76.0 | 5.64e-01 | 100.0% | 40.0% |
| 4595970 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.88 | 78.0 | 6.67e-01 | 100.0% | 78.3% |
| 3291331 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.87 | 76.0 | 5.90e-01 | 100.0% | 46.3% |
| 3279596 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.87 | 75.0 | 4.72e-01 | 100.0% | 19.5% |
| 4683276 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.87 | 76.0 | 5.65e-01 | 100.0% | 40.0% |
| 3908306 | 101.1.1.101 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_40 | 0.87 | 75.0 | 6.43e-01 | 100.0% | 61.7% |
| 4661582 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.87 | 74.0 | 5.24e-01 | 100.0% | 32.7% |
| 3954433 | 101.1.1.17 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 | 0.87 | 75.0 | 7.09e-01 | 100.0% | 82.2% |
| 4175748 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.87 | 75.0 | 5.90e-01 | 100.0% | 47.5% |
| 4541333 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.86 | 74.0 | 6.79e-01 | 100.0% | 74.0% |
| 3795916 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.86 | 74.0 | 7.05e-01 | 100.0% | 82.2% |
| 3959876 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.86 | 74.0 | 5.40e-01 | 100.0% | 37.0% |
| 4966195 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.86 | 73.0 | 5.98e-01 | 100.0% | 52.9% |
| 3581338 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.86 | 72.0 | 6.21e-01 | 97.4% | 60.0% |
| 4534822 | 101.1.1.107 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF134 | 0.86 | 72.0 | 5.82e-01 | 100.0% | 49.3% |
| 4205790 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.86 | 74.0 | 5.77e-01 | 100.0% | 46.3% |
| 3983411 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 0.85 | 72.0 | 5.79e-01 | 100.0% | 49.3% |
| 4383273 | 101.1.1.201 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Bot1p | 0.85 | 73.0 | 4.91e-01 | 100.0% | 27.0% |
| 4980021 | 101.1.3.33 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › DUF134 | 0.85 | 72.0 | 5.94e-01 | 100.0% | 52.9% |
| 3959929 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.85 | 74.0 | 5.75e-01 | 100.0% | 46.3% |
| 4944862 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.85 | 74.0 | 5.78e-01 | 100.0% | 47.5% |
| 3699551 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.85 | 74.0 | 5.77e-01 | 100.0% | 47.5% |
| 3283374 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.85 | 72.0 | 5.36e-01 | 100.0% | 38.9% |
| 3953011 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.84 | 72.0 | 6.40e-01 | 100.0% | 67.3% |
| 5051712 | 101.1.4.90 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_23 | 0.84 | 72.0 | 6.37e-01 | 97.4% | 69.1% |
| 4927516 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.81 | 66.0 | 5.80e-01 | 100.0% | 60.0% |
| 4454772 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.80 | 71.0 | 5.92e-01 | 100.0% | 58.5% |
| 3389609 | 101.1.1.35 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_psq | 0.77 | 62.0 | 5.21e-01 | 100.0% | 51.4% |
| 4929297 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.77 | 62.0 | 5.14e-01 | 92.1% | 51.4% |
| None | — | 0.77 | 64.0 | 3.88e-01 | 100.0% | 14.5% | |
| None | — | 0.77 | 64.0 | 3.87e-01 | 100.0% | 14.5% | |
| 3983783 | 101.1.1.13 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 | 0.75 | 63.0 | 4.78e-01 | 100.0% | 45.3% |
| 4928203 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.74 | 59.0 | 3.79e-01 | 94.7% | 19.0% |