←Back to structures
LacPavin_0818_WC40_scaffold_120392_prodigal-single.1__X__X__00121
Bact-VirLacPavin_0818_WC40_scaffold_120392_prodigal-single.1__X__X__00121
Identity
- Kingdom:
- phage
Quality
83.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 48-143
Domain cluster:
rep: OR354853.1__WNM55429.1__CoNPh30_CDS0010__00010__D14-133
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05105.18 best | Phage_holin_4_1 | 40.8 | 3.10e-10 | 99.0% | 76.1% |
CATH (56)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2p5tA00 | 1.10.8.130 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.74 | 62.0 | 6.32e-01 | 94.8% | 91.3% |
| 1fewA00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.73 | 52.0 | 4.26e-01 | 74.0% | 62.4% |
| 2uuiA00 | 1.20.120.550 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Membrane associated eicosanoid/glutathione metabolism-like domain | 0.73 | 59.0 | 5.03e-01 | 97.9% | 54.2% |
| 2wyhB04 | 1.20.1270.50 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Glycoside hydrolase family 38, central domain | 0.68 | 60.0 | 5.90e-01 | 94.8% | 92.1% |
| 1eq1A00 | 1.20.120.20 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein | 0.68 | 59.0 | 4.97e-01 | 97.9% | 95.2% |
| 6p73A02 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.66 | 58.0 | 5.06e-01 | 94.8% | 66.4% |
| 1oahA02 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.66 | 59.0 | 5.11e-01 | 95.8% | 67.6% |
| 6qumQ00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.65 | 41.0 | 4.58e-01 | 79.2% | 82.4% |
| 1t72A02 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.65 | 47.0 | 4.69e-01 | 75.0% | 76.5% |
| 3buxB01 | 1.20.930.20 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Adaptor protein Cbl, N-terminal domain | 0.65 | 56.0 | 5.03e-01 | 93.8% | 69.0% |
| 1fioA00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.64 | 49.0 | 3.95e-01 | 81.2% | 46.8% |
| 4ys0A02 | 1.10.3060.10 | Mainly Alpha › Orthogonal Bundle › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA | 0.64 | 51.0 | 4.24e-01 | 85.4% | 94.7% |
| 2c5iT00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.64 | 45.0 | 4.55e-01 | 72.9% | 76.6% |
| 3m9vA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.64 | 56.0 | 4.75e-01 | 95.8% | 72.6% |
| 3onjA00 | 1.20.58.400 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins | 0.63 | 45.0 | 4.54e-01 | 75.0% | 78.4% |
| 7dl9A01 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.63 | 53.0 | 4.27e-01 | 94.8% | 84.0% |
| 3rguB00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.62 | 50.0 | 5.17e-01 | 92.7% | 96.6% |
| 2cmrA00 | 1.20.58.1860 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.62 | 47.0 | 3.82e-01 | 82.3% | 85.4% |
| 3a98A02 | 1.20.1270.350 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Dedicator of cytokinesis N-terminal subdomain | 0.61 | 48.0 | 4.97e-01 | 88.5% | 92.0% |
| 1u7lA02 | 1.20.1460.10 | Mainly Alpha › Up-down Bundle › subunit c (vma5p) of the yeast v-atpase, domain 2 › subunit c (vma5p) of the yeast v-atpase, domain 2 | 0.61 | 55.0 | 4.42e-01 | 97.9% | 54.6% |
| 3fb2A01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.61 | 42.0 | 4.15e-01 | 71.9% | 73.3% |
| 4m70I00 | 1.20.5.4130 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.61 | 49.0 | 4.75e-01 | 93.8% | 77.8% |
| 2yfaB01 | 1.20.1440.210 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.61 | 52.0 | 4.88e-01 | 95.8% | 77.3% |
| 4hz4A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.61 | 41.0 | 3.92e-01 | 70.8% | 58.9% |
| 4hr1A00 | 1.20.1270.410 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.61 | 53.0 | 5.01e-01 | 99.0% | 88.1% |
| 4v1gA00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.60 | 42.0 | 4.39e-01 | 70.8% | 87.1% |
| 2ap3A00 | 1.20.120.570 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YkyA-like | 0.60 | 43.0 | 3.48e-01 | 75.0% | 55.2% |
| 2js5A00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.60 | 40.0 | 4.59e-01 | 70.8% | 93.0% |
| 3h3mA00 | 1.20.58.380 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Flagellar protein flit. | 0.60 | 46.0 | 4.80e-01 | 88.5% | 85.4% |
| 3pltA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.59 | 42.0 | 3.32e-01 | 75.0% | 67.3% |
| 1xzpA02 | 1.20.120.430 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › tRNA modification GTPase MnmE domain 2 | 0.58 | 46.0 | 3.90e-01 | 86.5% | 98.8% |
| 3m7gA02 | 1.10.8.1010 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.58 | 50.0 | 5.02e-01 | 92.7% | 95.8% |
| 1qdbA02 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.58 | 49.0 | 4.35e-01 | 95.8% | 63.6% |
| 3r2qA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.58 | 39.0 | 3.77e-01 | 75.0% | 59.3% |
| 4nqiD00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.58 | 50.0 | 3.83e-01 | 96.9% | 78.9% |
| 3swhA01 | 1.10.357.50 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › | 0.58 | 43.0 | 3.65e-01 | 79.2% | 84.8% |
| 4mhlA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.58 | 46.0 | 3.92e-01 | 94.8% | 52.2% |
| 3tulB00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.57 | 47.0 | 4.25e-01 | 89.6% | 90.2% |
| 4i9oA00 | 1.10.246.20 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Coactivator CBP, KIX domain | 0.57 | 41.0 | 4.44e-01 | 91.7% | 94.9% |
| 1sumB01 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.57 | 50.0 | 4.85e-01 | 93.8% | 91.6% |
| 1sumB02 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.56 | 52.0 | 4.85e-01 | 99.0% | 95.8% |
| 7c1iA01 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.56 | 39.0 | 3.86e-01 | 95.8% | 68.0% |
| 6h9xA01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.56 | 39.0 | 3.85e-01 | 71.9% | 95.1% |
| 3a7mA01 | 1.20.58.380 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Flagellar protein flit. | 0.56 | 40.0 | 3.83e-01 | 81.2% | 64.5% |
| 1j5wA02 | 1.20.58.180 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Class II aaRS and biotin synthetases; domain 2 | 0.56 | 41.0 | 4.56e-01 | 93.8% | 96.1% |
| 3nvoB02 | 1.20.58.340 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region | 0.55 | 48.0 | 4.55e-01 | 94.8% | 88.8% |
| 1s35A02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.55 | 41.0 | 3.95e-01 | 79.2% | 78.2% |
| 2fupA00 | 1.20.58.300 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › FlgN-like | 0.54 | 48.0 | 4.38e-01 | 96.9% | 92.9% |
| 1vcsA00 | 1.20.58.400 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins | 0.53 | 41.0 | 4.03e-01 | 82.3% | 80.4% |
| 3ck6C02 | 1.20.58.340 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region | 0.53 | 46.0 | 4.31e-01 | 94.8% | 84.0% |
| 4qndA00 | 1.20.1280.290 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.52 | 44.0 | 4.39e-01 | 100.0% | 87.6% |
| 2i0mA02 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.52 | 48.0 | 4.73e-01 | 100.0% | 99.0% |
| 4dvyP01 | 1.10.357.130 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › | 0.52 | 43.0 | 3.41e-01 | 89.6% | 46.2% |
| 3kavA00 | 1.20.1270.360 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.52 | 41.0 | 4.07e-01 | 95.8% | 82.4% |
| 1sigA00 | 1.10.601.10 | Mainly Alpha › Orthogonal Bundle › RNA Polymerase Primary Sigma Factor › RNA Polymerase Primary Sigma Factor | 0.51 | 45.0 | 3.17e-01 | 97.9% | 85.6% |
| 1ywqA00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.51 | 40.0 | 3.15e-01 | 83.3% | 77.9% |
ECOD (63)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3961831 | 103.4.1.7 ↗ | alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › DUF1290 | 0.87 | 72.0 | 6.97e-01 | 93.8% | 79.0% |
| 4029596 | 5001.1.1.81 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › THH1_TOM1-3_dom | 0.84 | 78.0 | 5.79e-01 | 100.0% | 51.7% |
| 4024287 | 5001.1.1.81 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › THH1_TOM1-3_dom | 0.83 | 77.0 | 5.33e-01 | 100.0% | 41.0% |
| 4954635 | 4207.1.2.0 ↗ | alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › MED7 hinge region | 0.79 | 48.0 | 4.89e-01 | 84.4% | 62.1% |
| 4027147 | 3871.1.1.1 ↗ | alpha duplicates or obligate multimers › PHIST › PHIST › PHIST › PRESAN | 0.75 | 62.0 | 5.54e-01 | 87.5% | 77.7% |
| 3349480 | 159.1.2.0 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related | 0.72 | 56.0 | 5.81e-01 | 91.7% | 88.9% |
| 5043412 | 1025.1.1.0 ↗ | alpha bundles › Stonustoxin helical domain › Stonustoxin helical domain › Stonustoxin helical domain | 0.71 | 63.0 | 5.90e-01 | 94.8% | 93.0% |
| 3989535 | 632.6.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Plasmid maintenance system epsilon/zeta, antidote epsilon subunit › Plasmid maintenance system epsilon/zeta, antidote epsilon subunit | 0.71 | 59.0 | 6.01e-01 | 94.8% | 90.5% |
| 4996751 | 632.1.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain | 0.70 | 62.0 | 6.08e-01 | 96.9% | 88.6% |
| 4013477 | 1025.1.1.0 ↗ | alpha bundles › Stonustoxin helical domain › Stonustoxin helical domain › Stonustoxin helical domain | 0.70 | 60.0 | 5.78e-01 | 94.8% | 92.7% |
| 3620092 | 3860.1.1.0 ↗ | alpha bundles › Myosin VI lever arm › Myosin VI lever arm › Myosin VI lever arm | 0.70 | 60.0 | 5.30e-01 | 96.9% | 65.9% |
| 5014127 | 5065.1.1.1 ↗ | alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › ABC-3 | 0.70 | 57.0 | 4.13e-01 | 94.8% | 31.5% |
| 4267909 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.70 | 59.0 | 4.58e-01 | 89.6% | 79.5% |
| 4501553 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.69 | 60.0 | 5.53e-01 | 94.8% | 99.2% |
| 5079638 | 632.1.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain | 0.69 | 60.0 | 5.99e-01 | 94.8% | 90.0% |
| 3362472 | 605.1.1.132 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › DUF641 | 0.69 | 60.0 | 5.73e-01 | 93.8% | 82.7% |
| 4934610 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.68 | 51.0 | 5.43e-01 | 91.7% | 89.4% |
| 3389526 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.68 | 55.0 | 5.42e-01 | 94.8% | 84.0% |
| 3757 | 601.20.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Apolipophorin-III › Apolipophorin-III › ApoLp-III | 0.68 | 59.0 | 4.97e-01 | 97.9% | 95.2% |
| 3335328 | 103.4.1.0 ↗ | alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein | 0.67 | 56.0 | 5.61e-01 | 97.9% | 88.0% |
| 4333013 | 547.1.1.1 ↗ | alpha duplicates or obligate multimers › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › GlutR_dimer | 0.67 | 50.0 | 5.37e-01 | 79.2% | 96.2% |
| 5018461 | 1076.1.1.4 ↗ | alpha bundles › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › PrsW-protease | 0.67 | 56.0 | 4.31e-01 | 93.8% | 42.2% |
| 4959565 | 1075.1.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain | 0.67 | 58.0 | 4.47e-01 | 94.8% | 74.3% |
| 5071125 | 632.1.1.3 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain › Alpha-mann_mid | 0.67 | 59.0 | 5.74e-01 | 94.8% | 88.6% |
| 3242683 | 632.1.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain | 0.66 | 52.0 | 5.43e-01 | 89.6% | 90.0% |
| 4078986 | 3831.1.1.0 ↗ | alpha bundles › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 | 0.65 | 54.0 | 5.46e-01 | 92.7% | 95.8% |
| 4236831 | 604.6.1.50 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › DUF2524 | 0.65 | 41.0 | 4.44e-01 | 71.9% | 76.2% |
| 4494025 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.64 | 58.0 | 5.62e-01 | 97.9% | 93.3% |
| 4564044 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.64 | 45.0 | 3.36e-01 | 75.0% | 29.6% |
| 3171345 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.63 | 46.0 | 3.72e-01 | 76.0% | 43.9% |
| 3459621 | 3826.1.1.0 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) | 0.63 | 54.0 | 5.33e-01 | 94.8% | 89.0% |
| 4456090 | 5086.1.1.94 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HB_LcnD | 0.63 | 46.0 | 3.53e-01 | 87.5% | 33.3% |
| 5041273 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.62 | 54.0 | 5.25e-01 | 93.8% | 87.6% |
| 4995305 | 604.5.1.2 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PhoU | 0.62 | 44.0 | 4.47e-01 | 72.9% | 75.8% |
| 3744787 | 633.22.1.0 ↗ | alpha bundles › Bromodomain-like › Vitamin K epoxide reductase (VKOR) › Vitamin K epoxide reductase (VKOR) | 0.61 | 51.0 | 4.63e-01 | 95.8% | 68.5% |
| 4942859 | 605.4.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › ROP protein › ROP protein | 0.61 | 51.0 | 5.32e-01 | 92.7% | 98.9% |
| 4998043 | 633.29.1.13 ↗ | alpha bundles › Bromodomain-like › Putative uncharacterized protein PAV1-137 › Putative uncharacterized protein PAV1-137 › DUF2096_N | 0.61 | 52.0 | 5.18e-01 | 95.8% | 90.0% |
| 3330281 | 4992.1.1.0 ↗ | extended segments › RelB-like › RelB-like › RelB-like | 0.61 | 52.0 | 5.03e-01 | 94.8% | 87.3% |
| 3557114 | 604.1.1.66 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin_1st_PEPL | 0.60 | 43.0 | 4.18e-01 | 75.0% | 70.0% |
| 4365052 | 5041.1.1.1 ↗ | extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › ATP-synt_C | 0.60 | 43.0 | 4.33e-01 | 76.0% | 74.7% |
| 3853566 | 604.5.1.0 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) | 0.60 | 54.0 | 5.04e-01 | 94.8% | 80.0% |
| 3924651 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.60 | 43.0 | 4.40e-01 | 75.0% | 75.8% |
| 3262024 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.60 | 49.0 | 3.85e-01 | 91.7% | 72.1% |
| 3788489 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.59 | 50.0 | 3.93e-01 | 94.8% | 84.1% |
| 4994150 | 632.18.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › hypothetical protein PA2901 › hypothetical protein PA2901 | 0.59 | 49.0 | 4.96e-01 | 96.9% | 92.6% |
| 3704762 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.59 | 47.0 | 4.32e-01 | 85.4% | 86.4% |
| 3647788 | 632.1.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain | 0.58 | 49.0 | 4.94e-01 | 93.8% | 92.6% |
| 3711235 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.58 | 52.0 | 2.98e-01 | 100.0% | 27.9% |
| 3497911 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.58 | 49.0 | 4.42e-01 | 94.8% | 71.9% |
| 4501940 | 1111.1.1.1 ↗ | alpha complex topology › Trimeric intracellular cation (TRIC) channel › Trimeric intracellular cation (TRIC) channel › Trimeric intracellular cation (TRIC) channel › Gly_transporter | 0.57 | 50.0 | 4.01e-01 | 100.0% | 71.6% |
| 3270160 | 603.1.1.3 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › V-SNARE | 0.57 | 38.0 | 3.83e-01 | 70.8% | 67.0% |
| 3616669 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.56 | 51.0 | 4.81e-01 | 97.9% | 98.3% |
| 4883406 | 622.4.1.1 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related › Blo-t-5 | 0.56 | 49.0 | 4.63e-01 | 94.8% | 89.7% |
| 2060710 | 604.1.1.1 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin | 0.55 | 41.0 | 3.97e-01 | 79.2% | 77.5% |
| 1019363 | 604.5.1.2 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PhoU | 0.53 | 48.0 | 4.56e-01 | 100.0% | 98.2% |
| 3895470 | 3826.1.1.0 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) | 0.53 | 42.0 | 4.25e-01 | 99.0% | 89.5% |
| 3496462 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.52 | 48.0 | 4.77e-01 | 100.0% | 97.0% |
| 4373117 | 5069.1.1.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes | 0.52 | 45.0 | 4.05e-01 | 100.0% | 72.9% |
| 3526861 | 603.1.1.99 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF27021 | 0.52 | 47.0 | 4.49e-01 | 97.9% | 87.3% |
| 3398622 | 604.6.1.1 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › GAT | 0.51 | 45.0 | 4.67e-01 | 93.8% | 100.0% |
| 4946795 | 633.12.1.0 ↗ | alpha bundles › Bromodomain-like › Ta0600-like › Ta0600-like | 0.50 | 36.0 | 3.64e-01 | 72.9% | 96.8% |
| 55069 | 603.1.1.1 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin | 0.50 | 43.0 | 4.16e-01 | 93.8% | 91.7% |
| 4565043 | 3718.1.1.0 ↗ | alpha bundles › Flagellar protein fliT › Flagellar protein fliT › Flagellar protein fliT | 0.50 | 43.0 | 4.51e-01 | 93.8% | 98.9% |
D2
high
residues 175-278
Domain cluster:
rep: CAKLQF020000002.1__CAH1073768.1__SAMEA5780031_00655__00283__D403-506
Pfam (4)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08448.17 best | PAS_4 | 26.9 | 6.80e-06 | 98.1% | 83.6% |
| PF00989.32 | PAS | 25.8 | 1.30e-05 | 97.1% | 85.8% |
| PF13426.14 | PAS_9 | 30.5 | 5.00e-07 | 95.2% | 91.3% |
| PF08447.19 | PAS_3 | 42.9 | 6.60e-11 | 83.7% | 97.8% |
CATH (79)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2b02A01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.91 | 84.0 | 8.44e-01 | 97.1% | 99.0% |
| 2r78C00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.88 | 76.0 | 7.32e-01 | 97.1% | 81.9% |
| 3oloA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.87 | 75.0 | 7.31e-01 | 97.1% | 84.7% |
| 3h9wA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.86 | 81.0 | 7.98e-01 | 100.0% | 99.1% |
| 3eehA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.86 | 80.0 | 7.66e-01 | 98.1% | 89.7% |
| 4f3lA03 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.86 | 80.0 | 7.57e-01 | 100.0% | 86.1% |
| 2kdkA01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.86 | 80.0 | 7.91e-01 | 100.0% | 96.3% |
| 3lyxB00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.85 | 79.0 | 7.52e-01 | 100.0% | 86.7% |
| 2gj3A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.85 | 79.0 | 7.52e-01 | 100.0% | 87.4% |
| 4hoiB00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.85 | 79.0 | 7.62e-01 | 99.0% | 94.7% |
| 5svgC00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.84 | 79.0 | 7.46e-01 | 100.0% | 95.9% |
| 2z6cA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.84 | 78.0 | 7.36e-01 | 99.0% | 87.6% |
| 4hiaA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.84 | 78.0 | 6.42e-01 | 99.0% | 60.2% |
| 3ewkA01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.84 | 77.0 | 7.82e-01 | 99.0% | 100.0% |
| 4i5sA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.84 | 73.0 | 7.49e-01 | 98.1% | 96.9% |
| 1bywA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.84 | 78.0 | 7.68e-01 | 100.0% | 99.1% |
| 1p97A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.84 | 78.0 | 7.53e-01 | 100.0% | 93.0% |
| 2pd8B00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.84 | 75.0 | 6.74e-01 | 96.2% | 81.4% |
| 4r3aA01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.83 | 77.0 | 6.36e-01 | 100.0% | 60.8% |
| 7a6pB01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.83 | 78.0 | 6.97e-01 | 100.0% | 79.0% |
| 3ewkA03 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.83 | 75.0 | 7.47e-01 | 97.1% | 99.1% |
| 5iu1B00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.83 | 75.0 | 7.36e-01 | 98.1% | 91.1% |
| 4dj3B02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.82 | 76.0 | 6.61e-01 | 100.0% | 70.1% |
| 2v0uA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.82 | 76.0 | 6.68e-01 | 99.0% | 72.6% |
| 4hh2C04 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.82 | 74.0 | 7.08e-01 | 98.1% | 85.5% |
| 3mr0A01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.82 | 74.0 | 7.25e-01 | 96.2% | 90.0% |
| 5hwtB00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.82 | 75.0 | 7.06e-01 | 99.0% | 88.5% |
| 3bwlB00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.82 | 72.0 | 6.77e-01 | 97.1% | 79.7% |
| 3cloC01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.81 | 75.0 | 6.00e-01 | 99.0% | 65.8% |
| 2vlgC00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.81 | 74.0 | 7.46e-01 | 99.0% | 99.0% |
| 3mjqA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.81 | 72.0 | 7.16e-01 | 98.1% | 92.5% |
| 2jheA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.81 | 65.0 | 6.49e-01 | 99.0% | 82.4% |
| 6kjuB01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.81 | 73.0 | 7.07e-01 | 99.0% | 90.6% |
| 1f98A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.80 | 71.0 | 6.66e-01 | 97.1% | 78.4% |
| 4f3lA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.80 | 74.0 | 7.01e-01 | 99.0% | 97.5% |
| 3mfxB00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.80 | 70.0 | 6.78e-01 | 97.1% | 86.0% |
| 6hmjA01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.79 | 74.0 | 7.40e-01 | 100.0% | 99.0% |
| 3mqqB00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.79 | 72.0 | 6.88e-01 | 99.0% | 86.4% |
| 1wa9A02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.79 | 72.0 | 6.08e-01 | 100.0% | 66.1% |
| 3fc7A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.79 | 67.0 | 6.88e-01 | 98.1% | 96.0% |
| 1d06A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.78 | 71.0 | 6.60e-01 | 99.0% | 80.0% |
| 3b33A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.78 | 68.0 | 6.68e-01 | 97.1% | 89.0% |
| 1s67L00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.78 | 70.0 | 6.70e-01 | 98.1% | 87.4% |
| 4jgpA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.77 | 56.0 | 5.80e-01 | 96.2% | 79.8% |
| 6zj8D01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.77 | 63.0 | 6.09e-01 | 100.0% | 78.9% |
| 4hh2B03 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.76 | 68.0 | 6.95e-01 | 99.0% | 99.0% |
| 3k3dA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.76 | 70.0 | 6.53e-01 | 100.0% | 81.7% |
| 4hh3A01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.74 | 64.0 | 6.23e-01 | 97.1% | 85.1% |
| 5xgbA01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.74 | 66.0 | 6.38e-01 | 99.0% | 85.6% |
| 3mxqC00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.74 | 67.0 | 6.27e-01 | 98.1% | 82.4% |
| 3fg8A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.73 | 62.0 | 6.21e-01 | 99.0% | 89.6% |
| 4ehoA04 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.73 | 65.0 | 6.12e-01 | 98.1% | 81.5% |
| 3luqB00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.70 | 63.0 | 6.11e-01 | 98.1% | 88.6% |
| 3volA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.70 | 64.0 | 5.78e-01 | 100.0% | 78.3% |
| 3icyA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.69 | 63.0 | 6.06e-01 | 98.1% | 98.3% |
| 3caxA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.69 | 58.0 | 5.32e-01 | 97.1% | 68.8% |
| 1oj5A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.68 | 61.0 | 6.15e-01 | 99.0% | 98.1% |
| 3pxpA02 | 3.30.450.180 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.67 | 59.0 | 4.84e-01 | 100.0% | 78.9% |
| 2qkpD00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.64 | 56.0 | 5.21e-01 | 98.1% | 76.1% |
| 2g7uC02 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.64 | 58.0 | 4.80e-01 | 99.0% | 71.3% |
| 5y6iA02 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.63 | 58.0 | 4.96e-01 | 99.0% | 74.5% |
| 1ysqA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.63 | 56.0 | 4.67e-01 | 99.0% | 71.8% |
| 5tjjB02 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.60 | 53.0 | 4.46e-01 | 99.0% | 71.9% |
| 3lydA01 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.58 | 45.0 | 4.10e-01 | 100.0% | 61.3% |
| 3ugfB02 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.58 | 40.0 | 3.37e-01 | 100.0% | 41.8% |
| 3jcuO01 | 2.40.160.30 | Mainly Beta › Beta Barrel › Porin › Photosystem II, cytochrome c-550 precursor | 0.55 | 47.0 | 3.96e-01 | 93.3% | 84.1% |
| 4bboA00 | 2.40.128.30 | Mainly Beta › Beta Barrel › Lipocalin › Avidin-like | 0.54 | 44.0 | 4.30e-01 | 87.5% | 92.0% |
| 2imjD01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 45.0 | 4.12e-01 | 94.2% | 67.6% |
| 4r1kB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 45.0 | 4.12e-01 | 92.3% | 85.3% |
| 3hx8A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 45.0 | 4.25e-01 | 94.2% | 95.3% |
| 4ktpA01 | 2.70.98.40 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain | 0.53 | 44.0 | 3.42e-01 | 94.2% | 76.0% |
| 7c5wA01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 43.0 | 3.89e-01 | 91.3% | 98.6% |
| 5aigA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 43.0 | 4.16e-01 | 94.2% | 95.2% |
| 3ff2A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 41.0 | 4.04e-01 | 89.4% | 94.0% |
| 3er7B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 43.0 | 4.11e-01 | 93.3% | 96.7% |
| 4d47A00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.51 | 43.0 | 2.91e-01 | 94.2% | 29.4% |
| 3djwA00 | 3.30.160.300 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.51 | 41.0 | 4.26e-01 | 87.5% | 95.8% |
| 4ztkA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.50 | 43.0 | 3.32e-01 | 99.0% | 81.7% |
| 2h36X00 | 3.30.160.300 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.50 | 41.0 | 4.06e-01 | 88.5% | 85.2% |
ECOD (100)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4999857 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.93 | 90.0 | 8.45e-01 | 100.0% | 91.7% |
| 4970454 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.93 | 88.0 | 7.73e-01 | 100.0% | 75.9% |
| 5021979 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.92 | 89.0 | 8.51e-01 | 100.0% | 96.5% |
| 5052073 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.92 | 87.0 | 5.95e-01 | 100.0% | 34.0% |
| 5004040 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.91 | 84.0 | 7.94e-01 | 98.1% | 84.2% |
| 4980686 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.90 | 84.0 | 8.27e-01 | 99.0% | 98.2% |
| 3971533 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.89 | 82.0 | 8.23e-01 | 97.1% | 97.1% |
| 3631997 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.89 | 81.0 | 6.12e-01 | 98.1% | 45.0% |
| 5068525 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.89 | 84.0 | 7.49e-01 | 100.0% | 75.7% |
| 4996826 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.89 | 84.0 | 5.12e-01 | 100.0% | 19.4% |
| 4961465 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.89 | 83.0 | 7.84e-01 | 99.0% | 85.8% |
| 5061582 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.89 | 83.0 | 7.84e-01 | 99.0% | 85.8% |
| 4938362 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.88 | 84.0 | 8.20e-01 | 100.0% | 95.5% |
| 5047296 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.88 | 83.0 | 8.00e-01 | 100.0% | 91.3% |
| 4999616 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.88 | 83.0 | 5.41e-01 | 100.0% | 26.8% |
| 4960099 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.88 | 83.0 | 6.17e-01 | 100.0% | 45.1% |
| 3274454 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.88 | 83.0 | 5.04e-01 | 100.0% | 18.8% |
| 3506163 | 223.1.1.29 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_11 | 0.88 | 82.0 | 7.72e-01 | 100.0% | 85.5% |
| 3723387 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.88 | 82.0 | 6.60e-01 | 99.0% | 63.2% |
| 3737772 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.88 | 83.0 | 7.98e-01 | 100.0% | 92.2% |
| 5062860 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.88 | 80.0 | 7.81e-01 | 97.1% | 89.4% |
| 4957161 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.88 | 82.0 | 8.04e-01 | 99.0% | 93.6% |
| 4959569 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.88 | 82.0 | 7.75e-01 | 99.0% | 85.8% |
| 3626119 | 223.1.1.29 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_11 | 0.88 | 82.0 | 7.06e-01 | 100.0% | 68.4% |
| 4945265 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.88 | 82.0 | 7.92e-01 | 100.0% | 92.2% |
| None | — | 0.88 | 82.0 | 7.25e-01 | 100.0% | 80.7% | |
| 4958897 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.88 | 80.0 | 7.15e-01 | 97.1% | 72.1% |
| 5044909 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.87 | 82.0 | 7.34e-01 | 100.0% | 75.7% |
| 4977960 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.87 | 82.0 | 4.90e-01 | 100.0% | 16.4% |
| 4958260 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.87 | 83.0 | 8.30e-01 | 100.0% | 100.0% |
| 3687000 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.87 | 81.0 | 5.86e-01 | 99.0% | 39.2% |
| 4977583 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.87 | 81.0 | 7.98e-01 | 99.0% | 95.5% |
| 5006333 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.87 | 80.0 | 7.98e-01 | 97.1% | 96.2% |
| 3821773 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.87 | 81.0 | 6.95e-01 | 99.0% | 66.5% |
| 4951489 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.87 | 81.0 | 7.80e-01 | 99.0% | 89.6% |
| 5021978 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.87 | 80.0 | 7.99e-01 | 99.0% | 96.2% |
| 5049432 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.87 | 79.0 | 5.28e-01 | 98.1% | 28.7% |
| 5061583 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.87 | 81.0 | 7.37e-01 | 100.0% | 77.8% |
| 4960917 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.87 | 82.0 | 5.95e-01 | 100.0% | 41.2% |
| 5055894 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.87 | 80.0 | 7.44e-01 | 99.0% | 81.6% |
| 5045423 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.87 | 81.0 | 6.00e-01 | 99.0% | 43.8% |
| None | — | 0.86 | 82.0 | 6.92e-01 | 100.0% | 66.9% | |
| 4989532 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.86 | 81.0 | 7.82e-01 | 100.0% | 92.2% |
| 3731403 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.86 | 80.0 | 7.48e-01 | 99.0% | 83.2% |
| 4957167 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.86 | 81.0 | 5.95e-01 | 99.0% | 42.4% |
| 4142766 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.86 | 78.0 | 7.15e-01 | 96.2% | 76.9% |
| 4959270 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.86 | 81.0 | 5.11e-01 | 100.0% | 23.2% |
| 4986904 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.86 | 80.0 | 5.83e-01 | 100.0% | 40.8% |
| 4960078 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.86 | 81.0 | 5.85e-01 | 100.0% | 41.2% |
| 138820 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.86 | 80.0 | 7.65e-01 | 100.0% | 88.1% |
| 3462794 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.86 | 80.0 | 6.69e-01 | 99.0% | 62.4% |
| 4021548 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.86 | 80.0 | 7.36e-01 | 100.0% | 81.5% |
| 3386793 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.85 | 80.0 | 7.04e-01 | 100.0% | 73.1% |
| 3973974 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.85 | 81.0 | 7.93e-01 | 100.0% | 99.1% |
| 5049663 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.85 | 80.0 | 7.23e-01 | 100.0% | 78.5% |
| 4958869 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.85 | 79.0 | 7.91e-01 | 99.0% | 98.1% |
| 1388732 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.85 | 78.0 | 7.82e-01 | 97.1% | 100.0% |
| 5048718 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.85 | 80.0 | 5.15e-01 | 99.0% | 25.1% |
| 3779337 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.85 | 78.0 | 6.69e-01 | 97.1% | 65.2% |
| 3967163 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.85 | 79.0 | 7.27e-01 | 99.0% | 79.2% |
| 4060191 | 223.1.1.85 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3+PAS_9 | 0.85 | 80.0 | 5.60e-01 | 100.0% | 35.5% |
| 4930291 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.85 | 77.0 | 7.72e-01 | 98.1% | 96.2% |
| 1272062 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.85 | 79.0 | 7.80e-01 | 99.0% | 98.1% |
| 3967822 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.85 | 78.0 | 7.72e-01 | 99.0% | 93.6% |
| 3995035 | 223.1.1.29 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_11 | 0.85 | 79.0 | 6.83e-01 | 100.0% | 68.4% |
| 4951355 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.85 | 78.0 | 5.58e-01 | 97.1% | 37.5% |
| 3968855 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.85 | 79.0 | 7.30e-01 | 100.0% | 81.5% |
| 5047295 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.85 | 78.0 | 7.70e-01 | 98.1% | 96.4% |
| 4960175 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.85 | 79.0 | 7.34e-01 | 99.0% | 82.4% |
| 4957920 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.85 | 78.0 | 7.54e-01 | 97.1% | 89.6% |
| 3967408 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.85 | 79.0 | 7.27e-01 | 100.0% | 81.5% |
| 4980664 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.85 | 79.0 | 7.52e-01 | 100.0% | 87.5% |
| 4300729 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.85 | 79.0 | 6.29e-01 | 100.0% | 55.9% |
| 3386877 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.85 | 78.0 | 6.65e-01 | 99.0% | 64.4% |
| 5018818 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.84 | 79.0 | 5.82e-01 | 100.0% | 41.6% |
| 170705 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.84 | 78.0 | 7.78e-01 | 99.0% | 100.0% |
| 3982848 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.84 | 77.0 | 6.71e-01 | 99.0% | 68.0% |
| 4134596 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.84 | 78.0 | 6.19e-01 | 100.0% | 54.5% |
| 3362008 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.84 | 78.0 | 6.35e-01 | 99.0% | 58.9% |
| 3623605 | 223.1.1.29 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_11 | 0.84 | 79.0 | 7.22e-01 | 100.0% | 81.5% |
| 3973275 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.84 | 76.0 | 7.05e-01 | 99.0% | 78.5% |
| 5006334 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.84 | 77.0 | 7.05e-01 | 100.0% | 78.5% |
| 3685774 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.83 | 77.0 | 6.54e-01 | 100.0% | 67.3% |
| 5007983 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.83 | 78.0 | 7.39e-01 | 100.0% | 86.7% |
| 4077998 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.83 | 77.0 | 7.12e-01 | 100.0% | 82.3% |
| 5048846 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.83 | 78.0 | 7.38e-01 | 100.0% | 86.7% |
| 5019121 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.83 | 78.0 | 7.50e-01 | 100.0% | 94.8% |
| 3946851 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.83 | 76.0 | 6.62e-01 | 100.0% | 68.4% |
| 3550252 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.83 | 76.0 | 7.24e-01 | 99.0% | 85.8% |
| None | — | 0.83 | 76.0 | 6.79e-01 | 99.0% | 75.2% | |
| 5045422 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.82 | 77.0 | 7.00e-01 | 100.0% | 78.5% |
| 3972657 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.82 | 76.0 | 7.25e-01 | 100.0% | 88.3% |
| 4949077 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.82 | 73.0 | 7.50e-01 | 96.2% | 100.0% |
| 4951491 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.80 | 74.0 | 7.05e-01 | 100.0% | 88.3% |
| 3967615 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.79 | 74.0 | 6.89e-01 | 100.0% | 84.8% |
| 4958152 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.78 | 70.0 | 7.03e-01 | 99.0% | 96.2% |
| 5049838 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.78 | 71.0 | 6.91e-01 | 100.0% | 89.6% |
| 5019276 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.78 | 71.0 | 5.23e-01 | 98.1% | 40.0% |
| 4950839 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.78 | 71.0 | 5.13e-01 | 100.0% | 36.8% |
| 4931935 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.78 | 70.0 | 6.29e-01 | 97.1% | 72.1% |