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LacPavin_0818_WC40_scaffold_120392_prodigal-single.1__X__X__00139
Bact-VirLacPavin_0818_WC40_scaffold_120392_prodigal-single.1__X__X__00139
Identity
- Kingdom:
- phage
Quality
95.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-56
Domain cluster:
representative
CATH (45)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5hy7B02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.77 | 58.0 | 3.54e-01 | 80.4% | 28.3% |
| 6n8pA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.75 | 58.0 | 3.52e-01 | 85.7% | 25.0% |
| 2v4jB01 | 3.30.70.3340 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.73 | 58.0 | 4.46e-01 | 89.3% | 59.1% |
| 3dueA00 | 3.40.1420.30 | Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › | 0.71 | 55.0 | 4.14e-01 | 85.7% | 36.2% |
| 4iglB00 | 2.180.10.10 | Mainly Beta › Shell › RHS repeat-associated core › RHS repeat-associated core | 0.70 | 46.0 | 2.60e-01 | 71.4% | 5.7% |
| 2ovrB02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.68 | 53.0 | 3.27e-01 | 85.7% | 22.1% |
| 4nsxA02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.68 | 53.0 | 3.32e-01 | 85.7% | 28.4% |
| 4hs5A00 | 3.30.920.10 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY | 0.67 | 47.0 | 3.82e-01 | 75.0% | 38.1% |
| 3lxqA01 | 3.30.1120.80 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.67 | 44.0 | 3.63e-01 | 73.2% | 38.4% |
| 4zn4A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.67 | 51.0 | 3.10e-01 | 87.5% | 22.0% |
| 1t6aA02 | 3.30.310.120 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Rbstp2229 like protein | 0.66 | 45.0 | 4.12e-01 | 73.2% | 53.8% |
| 2vouB01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.65 | 45.0 | 3.00e-01 | 73.2% | 80.0% |
| 1wv4B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.65 | 51.0 | 3.69e-01 | 85.7% | 96.8% |
| 4c5wA01 | 3.30.2020.30 | Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › | 0.65 | 47.0 | 3.90e-01 | 76.8% | 63.9% |
| 2m3xC02 | 2.40.10.360 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.64 | 50.0 | 4.66e-01 | 83.9% | 92.8% |
| 3rp7A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.64 | 46.0 | 3.27e-01 | 76.8% | 80.4% |
| 6qp7A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.64 | 49.0 | 2.90e-01 | 85.7% | 26.9% |
| 4pdyA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.63 | 49.0 | 4.10e-01 | 85.7% | 84.8% |
| 4l1mB00 | 2.130.10.30 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II | 0.63 | 50.0 | 3.04e-01 | 85.7% | 28.6% |
| 4a9wA00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.62 | 46.0 | 2.87e-01 | 80.4% | 100.0% |
| 2ogqA01 | 3.30.1120.30 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain | 0.62 | 56.0 | 4.27e-01 | 100.0% | 84.9% |
| 4bjzA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.62 | 43.0 | 3.16e-01 | 75.0% | 82.7% |
| 3n6rA03 | 3.30.700.30 | Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › | 0.61 | 47.0 | 3.62e-01 | 85.7% | 66.2% |
| 2q0lA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.60 | 43.0 | 3.01e-01 | 76.8% | 98.4% |
| 4g7nA01 | 3.30.1120.120 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.60 | 52.0 | 4.10e-01 | 100.0% | 81.8% |
| 2jmbA00 | 2.40.128.290 | Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein family Atu4866 | 0.60 | 44.0 | 3.97e-01 | 80.4% | 70.9% |
| 2m7oA00 | 3.10.450.400 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Uncharacterised protein PF15513, DUF4651 | 0.59 | 46.0 | 4.31e-01 | 85.7% | 72.9% |
| 5j3tA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.59 | 46.0 | 3.56e-01 | 85.7% | 70.6% |
| 5iqaA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.59 | 45.0 | 3.91e-01 | 85.7% | 92.2% |
| 2cduA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.59 | 42.0 | 3.08e-01 | 76.8% | 43.0% |
| 4q5eA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.56 | 43.0 | 3.94e-01 | 83.9% | 98.7% |
| 2ofqA01 | 2.60.40.2500 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 42.0 | 3.68e-01 | 80.4% | 92.1% |
| 4o2wD00 | 2.130.10.30 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II | 0.56 | 50.0 | 3.01e-01 | 98.2% | 93.4% |
| 3jtzA00 | 3.30.160.390 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Integrase, DNA-binding domain | 0.56 | 39.0 | 3.62e-01 | 75.0% | 59.7% |
| 4gp0B02 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.56 | 38.0 | 3.00e-01 | 87.5% | 32.5% |
| 2z9iC01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.56 | 33.0 | 2.83e-01 | 76.8% | 33.7% |
| 2lioA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.54 | 45.0 | 3.55e-01 | 100.0% | 75.7% |
| 4lgvD02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.54 | 43.0 | 2.87e-01 | 96.4% | 75.1% |
| 6mzoA01 | 3.40.50.11970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 38.0 | 2.96e-01 | 73.2% | 62.7% |
| 3cnwA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.53 | 40.0 | 3.23e-01 | 94.6% | 75.2% |
| 3licA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.52 | 39.0 | 3.56e-01 | 91.1% | 93.1% |
| 5fl3A01 | 3.30.450.90 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.51 | 40.0 | 3.33e-01 | 83.9% | 94.0% |
| 2ewvA01 | 3.30.450.90 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.51 | 39.0 | 3.28e-01 | 83.9% | 93.1% |
| 3rioA01 | 2.30.24.10 | Mainly Beta › Roll › Transcription Regulation, Sacy; Chain A › CAT RNA-binding domain | 0.50 | 39.0 | 3.66e-01 | 83.9% | 88.2% |
| 3h6qA00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.50 | 38.0 | 2.79e-01 | 83.9% | 58.9% |
ECOD (78)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3740661 | 5.1.4.119 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Rav1p_C | 0.80 | 63.0 | 3.71e-01 | 85.7% | 21.9% |
| 3411255 | 5.1.4.169 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd | 0.79 | 62.0 | 3.69e-01 | 85.7% | 23.7% |
| 3273263 | 5.1.4.169 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd | 0.79 | 63.0 | 3.66e-01 | 85.7% | 14.0% |
| 4030680 | 5.1.4.258 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 | 0.78 | 62.0 | 3.66e-01 | 85.7% | 26.7% |
| 3705445 | 5.1.11.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed | 0.77 | 56.0 | 3.22e-01 | 76.8% | 16.8% |
| 3994169 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.77 | 60.0 | 3.95e-01 | 83.9% | 22.7% |
| 3508282 | 5.1.4.169 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd | 0.76 | 60.0 | 3.59e-01 | 85.7% | 27.9% |
| 3784858 | 5.1.4.362 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_VPS8 | 0.76 | 61.0 | 3.55e-01 | 89.3% | 23.9% |
| 4014300 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.74 | 58.0 | 3.38e-01 | 85.7% | 40.2% |
| 4229593 | 5.1.4.30 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › LLGL | 0.74 | 58.0 | 3.48e-01 | 87.5% | 24.0% |
| 3498580 | 5.1.4.6 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,ANAPC4_WD40 | 0.74 | 57.0 | 3.41e-01 | 85.7% | 28.0% |
| 3257659 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.73 | 57.0 | 3.48e-01 | 87.5% | 37.1% |
| 3740970 | 5.1.4.249 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_pof12 | 0.72 | 57.0 | 3.48e-01 | 87.5% | 27.1% |
| 3717628 | 5.1.3.242 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF7914 | 0.72 | 57.0 | 3.52e-01 | 87.5% | 31.8% |
| 4567929 | 5.1.4.169 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd | 0.72 | 55.0 | 3.37e-01 | 85.7% | 13.0% |
| 3532938 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.72 | 56.0 | 3.39e-01 | 85.7% | 31.4% |
| 3546354 | 5.1.4.164 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_VPS8 | 0.72 | 56.0 | 3.37e-01 | 85.7% | 23.3% |
| 3744900 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.72 | 57.0 | 3.52e-01 | 85.7% | 29.0% |
| 3270014 | 5.1.4.223 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RIC1_2nd | 0.72 | 56.0 | 3.34e-01 | 85.7% | 21.8% |
| 3386276 | 809.2.1.1 ↗ | a+b two layers › BLIP-like › BT0923-like › BT0923-like › PepSY_like | 0.72 | 52.0 | 5.25e-01 | 87.5% | 78.2% |
| 68497 | 809.2.1.1 ↗ | a+b two layers › BLIP-like › BT0923-like › BT0923-like › PepSY_like | 0.71 | 55.0 | 5.54e-01 | 85.7% | 82.1% |
| 3792735 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.71 | 55.0 | 3.33e-01 | 85.7% | 20.6% |
| 3614108 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.71 | 53.0 | 3.15e-01 | 80.4% | 22.9% |
| 3224940 | 5.1.5.105 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_IFT140_1st | 0.71 | 55.0 | 3.33e-01 | 85.7% | 32.5% |
| 3703422 | 5.1.4.598 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DUF7914 | 0.71 | 56.0 | 3.32e-01 | 87.5% | 25.3% |
| 3742644 | 5.1.4.342 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_EDC4L | 0.71 | 55.0 | 3.30e-01 | 85.7% | 25.5% |
| 3718321 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.70 | 55.0 | 3.19e-01 | 85.7% | 22.6% |
| 3672647 | 5.1.4.297 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, NBCH_WD40 | 0.70 | 54.0 | 3.23e-01 | 85.7% | 25.3% |
| 3993048 | 292.2.1.1 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box | 0.70 | 50.0 | 3.99e-01 | 76.8% | 66.4% |
| 4948872 | 2003.1.1.50 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DUF364 | 0.69 | 53.0 | 3.42e-01 | 83.9% | 95.9% |
| 3410497 | 5.1.4.164 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_VPS8 | 0.69 | 53.0 | 3.22e-01 | 87.5% | 22.9% |
| 3407654 | 63.1.1.3 ↗ | beta barrels › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › PRKCSH | 0.69 | 49.0 | 3.57e-01 | 75.0% | 79.4% |
| 3608681 | 5.1.4.164 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_VPS8 | 0.69 | 53.0 | 3.17e-01 | 85.7% | 22.4% |
| 3959634 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.69 | 52.0 | 4.14e-01 | 82.1% | 56.5% |
| 3497858 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.69 | 53.0 | 3.14e-01 | 85.7% | 30.7% |
| 3435779 | 809.2.1.0 ↗ | a+b two layers › BLIP-like › BT0923-like › BT0923-like | 0.69 | 50.0 | 5.10e-01 | 85.7% | 80.0% |
| 4427813 | 241.2.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay | 0.68 | 44.0 | 3.63e-01 | 71.4% | 35.2% |
| 3714545 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.68 | 52.0 | 3.20e-01 | 85.7% | 13.2% |
| 3546306 | 292.2.1.1 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box | 0.68 | 52.0 | 4.33e-01 | 82.1% | 88.4% |
| 3738172 | 5.1.4.172 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_CAF1B_HIR1 | 0.68 | 52.0 | 3.11e-01 | 85.7% | 39.3% |
| 3809547 | 5.1.4.297 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, NBCH_WD40 | 0.68 | 53.0 | 3.25e-01 | 85.7% | 31.0% |
| 3057024 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.67 | 51.0 | 3.11e-01 | 85.7% | 23.2% |
| 3827259 | 5.1.4.550 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Kelch_FKB95 | 0.67 | 48.0 | 3.04e-01 | 85.7% | 14.7% |
| 3312418 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.67 | 54.0 | 3.33e-01 | 85.7% | 28.3% |
| 4021151 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.67 | 46.0 | 3.06e-01 | 73.2% | 46.0% |
| 3248456 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.66 | 46.0 | 3.69e-01 | 73.2% | 38.3% |
| 3233394 | 5.1.4.255 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD | 0.66 | 53.0 | 3.21e-01 | 85.7% | 27.8% |
| 136649 | 252.2.1.5 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › Arm-DNA-bind_3 | 0.66 | 45.0 | 3.85e-01 | 73.2% | 83.2% |
| 3842596 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.65 | 58.0 | 3.47e-01 | 100.0% | 96.4% |
| 3601303 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.65 | 56.0 | 3.40e-01 | 98.2% | 86.6% |
| 3940712 | 5.1.4.223 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RIC1_2nd | 0.65 | 51.0 | 2.81e-01 | 85.7% | 11.1% |
| None | — | 0.65 | 51.0 | 2.86e-01 | 85.7% | 11.0% | |
| 3869953 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.65 | 56.0 | 3.42e-01 | 100.0% | 98.2% |
| 3699699 | 5.1.4.179 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_Vps41 | 0.64 | 50.0 | 3.34e-01 | 85.7% | 34.2% |
| 4987228 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.64 | 49.0 | 3.57e-01 | 83.9% | 47.9% |
| 144366 | 241.2.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay | 0.64 | 44.0 | 3.44e-01 | 71.4% | 33.1% |
| 3891698 | 5.1.4.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH | 0.64 | 48.0 | 3.13e-01 | 85.7% | 31.0% |
| 1289445 | 206.1.1.11 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH | 0.63 | 49.0 | 3.04e-01 | 85.7% | 25.3% |
| 3584702 | 5.1.4.258 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 | 0.63 | 50.0 | 3.24e-01 | 85.7% | 42.0% |
| 5070364 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.63 | 48.0 | 3.20e-01 | 83.9% | 94.0% |
| 3195138 | 5.1.4.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH | 0.63 | 49.0 | 2.99e-01 | 85.7% | 24.9% |
| 4012027 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.63 | 50.0 | 3.66e-01 | 89.3% | 72.7% |
| 3384946 | 5.1.10.7 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed › RCC1, RCC1_2 | 0.63 | 50.0 | 3.76e-01 | 85.7% | 40.0% |
| 3942150 | 252.2.1.5 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › Arm-DNA-bind_3 | 0.63 | 44.0 | 3.79e-01 | 73.2% | 56.7% |
| 3176295 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.63 | 55.0 | 3.39e-01 | 100.0% | 76.5% |
| 5024450 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.62 | 50.0 | 3.88e-01 | 92.9% | 72.6% |
| 3728206 | 5.1.4.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH | 0.62 | 47.0 | 2.95e-01 | 85.7% | 29.6% |
| 1124180 | 3794.1.1.1 ↗ | a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit › PCC_BT | 0.61 | 47.0 | 3.60e-01 | 85.7% | 65.2% |
| 3967996 | 223.1.1.76 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_7 | 0.61 | 47.0 | 3.88e-01 | 89.3% | 79.1% |
| 3984933 | 252.2.1.5 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › Arm-DNA-bind_3 | 0.61 | 43.0 | 3.75e-01 | 75.0% | 52.2% |
| 3891357 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.60 | 44.0 | 2.59e-01 | 80.4% | 11.8% |
| 3743579 | 5.1.4.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH | 0.60 | 47.0 | 2.98e-01 | 85.7% | 16.7% |
| 5009324 | 218.4.1.1 ↗ | a+b two layers › Enolase-N/ribosomal protein › Dhaf4260 N-terminal domain › Dhaf4260 N-terminal domain › DUF4213 | 0.60 | 45.0 | 3.99e-01 | 80.4% | 96.2% |
| 3434864 | 77.2.1.1 ↗ | beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN | 0.59 | 40.0 | 3.41e-01 | 71.4% | 47.4% |
| 3889733 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.57 | 39.0 | 2.70e-01 | 71.4% | 23.2% |
| 4030336 | 2004.1.1.88 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › cobW | 0.57 | 50.0 | 3.26e-01 | 100.0% | 55.1% |
| 4954529 | 3335.1.1.0 ↗ | beta barrels › Handle domain in transferrin-binding protein B › Handle domain in transferrin-binding protein B › Handle domain in transferrin-binding protein B | 0.56 | 39.0 | 3.87e-01 | 75.0% | 98.3% |
| 3604446 | 2004.1.1.480 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_21, AAA_29 | 0.55 | 49.0 | 2.77e-01 | 98.2% | 12.4% |
D2
medium
residues 57-124
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3gpvA00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.61 | 49.0 | 4.14e-01 | 88.2% | 53.1% |
| 3ktdD02 | 1.10.3660.10 | Mainly Alpha › Orthogonal Bundle › 6-phosphogluconate dehydrogenase C-terminal fold › 6-phosphogluconate dehydrogenase C-terminal like domain | 0.60 | 49.0 | 4.26e-01 | 91.2% | 78.0% |
| 3vfzB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 38.0 | 3.92e-01 | 83.8% | 77.8% |
| 4uw9A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.53 | 42.0 | 3.96e-01 | 85.3% | 79.5% |
| 2zyhA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.52 | 43.0 | 3.01e-01 | 89.7% | 29.8% |
| 1bgwA03 | 1.10.268.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase; domain 3 › Topoisomerase, domain 3 | 0.51 | 40.0 | 3.42e-01 | 85.3% | 84.5% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4977912 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.67 | 52.0 | 3.87e-01 | 91.2% | 32.2% |
| 4022656 | 177.1.1.0 ↗ | alpha bundles › Phospholipase C/P1 nuclease › Phospholipase C/P1 nuclease › Phospholipase C/P1 nuclease | 0.66 | 53.0 | 3.47e-01 | 85.3% | 41.6% |