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LacPavin_0818_WC40_scaffold_15340_prodigal-single.1__X__X__00227
Bact-VirLacPavin_0818_WC40_scaffold_15340_prodigal-single.1__X__X__00227
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 84-207
Domain cluster:
rep: MZ326863.1__QYW02339.1__CPT_Paku_045__00045__D5-122
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01464.26 best | SLT | 39.8 | 4.40e-10 | 77.4% | 66.7% |
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4hjzA00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.84 | 80.0 | 6.89e-01 | 100.0% | 83.1% |
| 4c5fA02 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.84 | 80.0 | 7.09e-01 | 100.0% | 90.5% |
| 6cfcA01 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.82 | 78.0 | 7.02e-01 | 100.0% | 82.6% |
| 1qsaA03 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.82 | 78.0 | 6.83e-01 | 100.0% | 75.1% |
| 4yibA01 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.80 | 76.0 | 6.93e-01 | 100.0% | 79.7% |
| 3bkhA02 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.76 | 70.0 | 6.14e-01 | 100.0% | 89.6% |
| 4dq5B00 | 1.10.530.50 | Mainly Alpha › Orthogonal Bundle › Lysozyme › Peptidase U40 | 0.74 | 69.0 | 6.33e-01 | 100.0% | 82.5% |
| 1am7A00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.56 | 51.0 | 4.75e-01 | 100.0% | 90.9% |
| 1tafB00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.56 | 28.0 | 3.59e-01 | 83.9% | 84.3% |
| 3jsbA01 | 1.20.1440.300 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › RNA-directed RNA polymerase L, helical domain | 0.53 | 31.0 | 3.73e-01 | 86.3% | 87.7% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4995668 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.89 | 83.0 | 8.40e-01 | 100.0% | 98.4% |
| 4530587 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.85 | 81.0 | 6.94e-01 | 100.0% | 82.2% |
| 4515466 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.85 | 81.0 | 6.98e-01 | 100.0% | 84.4% |
| 3166094 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.85 | 81.0 | 7.04e-01 | 100.0% | 86.9% |
| 3839661 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.83 | 79.0 | 6.95e-01 | 100.0% | 78.2% |
| 3941811 | 235.1.1.32 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT, PF27553 | 0.82 | 78.0 | 6.89e-01 | 100.0% | 76.5% |
| 3979308 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.82 | 77.0 | 6.77e-01 | 100.0% | 81.1% |
| 4258903 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.81 | 75.0 | 6.69e-01 | 96.8% | 87.3% |
| 3965879 | 235.1.1.32 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT, PF27553 | 0.80 | 76.0 | 6.82e-01 | 100.0% | 76.4% |
| 3971115 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.79 | 74.0 | 6.59e-01 | 100.0% | 81.8% |
| 3385979 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.78 | 73.0 | 6.23e-01 | 100.0% | 92.6% |
| 3978377 | 235.1.1.0 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like | 0.78 | 73.0 | 6.15e-01 | 100.0% | 75.4% |
| 4164050 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.77 | 73.0 | 6.03e-01 | 100.0% | 71.7% |
| 4321901 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.77 | 73.0 | 6.25e-01 | 100.0% | 78.9% |
| 1175858 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.76 | 70.0 | 6.05e-01 | 100.0% | 86.2% |
| 3317412 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.76 | 69.0 | 5.78e-01 | 100.0% | 60.0% |
| 3944103 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.73 | 68.0 | 5.94e-01 | 100.0% | 77.2% |
| 3582448 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.70 | 59.0 | 5.88e-01 | 95.2% | 84.6% |
| 4331897 | 235.1.1.41 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › TraH_2 | 0.69 | 54.0 | 5.01e-01 | 81.5% | 86.0% |
| 4934384 | 101.1.2.947 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF27234 | 0.54 | 26.0 | 3.10e-01 | 90.3% | 63.5% |
| 3811911 | 148.1.1.4 ↗ | alpha arrays › Histone-like › Histone-related › Histone › CBFD_NFYB_HMF | 0.51 | 29.0 | 3.55e-01 | 91.1% | 88.7% |