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LacPavin_0818_WC40_scaffold_15340_prodigal-single.1__X__X__00310
Bact-VirLacPavin_0818_WC40_scaffold_15340_prodigal-single.1__X__X__00310
Identity
- Kingdom:
- phage
Quality
83.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-73
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3eeeA00 | 3.90.1520.10 | Alpha Beta › Alpha-Beta Complex › H-NOX domain › H-NOX domain | 0.58 | 45.0 | 3.36e-01 | 90.4% | 32.4% |
| 3bzvB00 | 3.40.1690.10 | Alpha Beta › 3-Layer(aba) Sandwich › name from scop › secretion proteins EscU | 0.55 | 38.0 | 3.75e-01 | 74.0% | 96.2% |
| 1f0iA01 | 3.30.870.10 | Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › Endonuclease Chain A | 0.53 | 44.0 | 3.25e-01 | 95.9% | 82.2% |
| 2qtsA04 | 1.10.287.820 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Acid-sensing ion channel domain | 0.52 | 39.0 | 3.79e-01 | 100.0% | 71.4% |
| 3rklA00 | 6.10.140.1640 | Special › Helix non-globular › Helix Hairpins › | 0.51 | 30.0 | 2.96e-01 | 100.0% | 53.8% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7178 | 873.1.1.5 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › HNOB | 0.58 | 45.0 | 3.34e-01 | 90.4% | 32.4% |
| 3593414 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.58 | 42.0 | 3.03e-01 | 79.5% | 48.1% |
| 3412786 | 3223.1.1.1 ↗ | beta sandwiches › Amiloride-sensitive cation channel 2 › Amiloride-sensitive cation channel 2 › Amiloride-sensitive cation channel 2 › ASC | 0.53 | 42.0 | 2.73e-01 | 89.0% | 61.6% |
| 3484882 | 3223.1.1.0 ↗ | beta sandwiches › Amiloride-sensitive cation channel 2 › Amiloride-sensitive cation channel 2 › Amiloride-sensitive cation channel 2 | 0.51 | 44.0 | 2.90e-01 | 98.6% | 80.0% |
| 3414096 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.51 | 42.0 | 3.67e-01 | 100.0% | 84.6% |