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LacPavin_0818_WC40_scaffold_15340_prodigal-single.1__X__X__00321
Bact-VirLacPavin_0818_WC40_scaffold_15340_prodigal-single.1__X__X__00321
Identity
- Kingdom:
- phage
Quality
72.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 25-78
Domain cluster:
representative
CATH (65)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3p04A00 | 3.30.110.150 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › SepF-like protein | 0.70 | 61.0 | 5.47e-01 | 100.0% | 72.7% |
| 3zieD00 | 3.30.110.150 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › SepF-like protein | 0.70 | 61.0 | 5.37e-01 | 100.0% | 70.7% |
| 3zihA00 | 3.30.110.150 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › SepF-like protein | 0.69 | 59.0 | 5.29e-01 | 100.0% | 70.9% |
| 5i2cB01 | 3.30.2130.10 | Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like | 0.65 | 49.0 | 3.64e-01 | 83.3% | 32.2% |
| 3lcvB02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.63 | 54.0 | 3.72e-01 | 100.0% | 30.2% |
| 4qmfB01 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.63 | 46.0 | 4.06e-01 | 81.5% | 52.4% |
| 2pt7G02 | 3.30.1370.180 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.63 | 53.0 | 5.00e-01 | 100.0% | 82.1% |
| 5iceA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.63 | 51.0 | 3.44e-01 | 100.0% | 35.9% |
| 3aqoA01 | 3.30.70.3400 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 47.0 | 4.15e-01 | 81.5% | 65.0% |
| 1yj7B01 | 3.30.70.1530 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hypothetical protein rpa1041 | 0.62 | 43.0 | 4.02e-01 | 81.5% | 56.3% |
| 8k5lA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.62 | 51.0 | 3.61e-01 | 100.0% | 45.5% |
| 6i6lA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.61 | 49.0 | 3.31e-01 | 98.1% | 43.6% |
| 2gjhA00 | 3.30.1070.20 | Alpha Beta › 2-Layer Sandwich › Cell Cycle; Chain A › | 0.61 | 46.0 | 4.55e-01 | 83.3% | 82.5% |
| 2gqcA01 | 3.30.70.2080 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 40.0 | 4.05e-01 | 77.8% | 66.1% |
| 2y8yA01 | 3.30.70.1200 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Crispr-associated protein; domain 1 | 0.61 | 46.0 | 4.03e-01 | 83.3% | 68.6% |
| 3onqA02 | 3.30.70.2730 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 44.0 | 3.98e-01 | 81.5% | 54.3% |
| 2cxiA03 | 3.30.56.10 | Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › | 0.61 | 44.0 | 4.10e-01 | 83.3% | 61.4% |
| 3ocjA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.60 | 50.0 | 3.20e-01 | 100.0% | 33.0% |
| 1dq3A04 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.59 | 51.0 | 4.07e-01 | 100.0% | 64.9% |
| 2yweA03 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.59 | 43.0 | 3.93e-01 | 83.3% | 59.8% |
| 5xamA02 | 3.30.70.3220 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 43.0 | 3.13e-01 | 79.6% | 31.1% |
| 1x19A02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.59 | 50.0 | 3.65e-01 | 100.0% | 36.3% |
| 2mzwA01 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.59 | 43.0 | 3.94e-01 | 81.5% | 60.5% |
| 5mmjh01 | 3.30.1370.30 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.59 | 49.0 | 4.51e-01 | 100.0% | 76.0% |
| 4kyzA00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.59 | 48.0 | 3.57e-01 | 100.0% | 79.0% |
| 2p5vA02 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.59 | 44.0 | 3.87e-01 | 83.3% | 53.6% |
| 1qysA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.58 | 48.0 | 4.19e-01 | 100.0% | 67.4% |
| 2ebbA00 | 3.30.1360.20 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase | 0.58 | 45.0 | 3.84e-01 | 88.9% | 54.2% |
| 7m0oA02 | 3.65.10.10 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain | 0.58 | 47.0 | 3.41e-01 | 100.0% | 29.9% |
| 4q5eA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.57 | 47.0 | 4.31e-01 | 96.3% | 84.0% |
| 8k1fC01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.57 | 47.0 | 3.33e-01 | 100.0% | 35.2% |
| 1whvA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.57 | 39.0 | 3.30e-01 | 79.6% | 40.0% |
| 8owfA01 | 2.60.40.290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 49.0 | 3.90e-01 | 100.0% | 54.1% |
| 7dvrA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 47.0 | 3.59e-01 | 100.0% | 44.7% |
| 1usmA00 | 3.30.1360.20 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase | 0.56 | 44.0 | 3.96e-01 | 88.9% | 64.9% |
| 3ezjA02 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.56 | 43.0 | 4.07e-01 | 90.7% | 70.6% |
| 3c0wA02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.56 | 45.0 | 3.83e-01 | 100.0% | 70.9% |
| 4ritA01 | 3.90.1150.170 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.55 | 47.0 | 3.14e-01 | 98.1% | 26.7% |
| 5mmiU01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.54 | 45.0 | 4.08e-01 | 100.0% | 76.8% |
| 2dpmA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.54 | 45.0 | 3.39e-01 | 100.0% | 34.8% |
| 3pm9A04 | 3.30.70.2740 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 38.0 | 3.46e-01 | 81.5% | 54.0% |
| 2amyA02 | 3.30.1240.20 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › Eukaryotic phosphomannomutase, cap domain | 0.54 | 45.0 | 3.76e-01 | 100.0% | 83.3% |
| 4v1al00 | 3.30.780.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain | 0.53 | 44.0 | 3.37e-01 | 94.4% | 42.1% |
| 1wzaA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.53 | 43.0 | 3.97e-01 | 100.0% | 81.0% |
| 2hf2B02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.53 | 45.0 | 3.67e-01 | 100.0% | 83.2% |
| 1lxjA00 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 39.0 | 3.26e-01 | 83.3% | 44.7% |
| 2ab5A02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.53 | 43.0 | 3.38e-01 | 100.0% | 46.3% |
| 2cveA02 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 36.0 | 3.47e-01 | 81.5% | 60.6% |
| 3jcmH04 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.52 | 39.0 | 3.58e-01 | 85.2% | 74.0% |
| 5hs7B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 42.0 | 3.65e-01 | 100.0% | 61.2% |
| 7xhzA01 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.52 | 43.0 | 3.43e-01 | 100.0% | 91.9% |
| 6liuC02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.52 | 42.0 | 3.45e-01 | 98.1% | 50.9% |
| 1aoeA00 | 3.40.430.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A | 0.52 | 42.0 | 2.95e-01 | 94.4% | 93.8% |
| 1vbkA01 | 3.30.70.1510 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › THUMP domain-like | 0.52 | 37.0 | 3.36e-01 | 81.5% | 65.1% |
| 2p5kA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 39.0 | 3.81e-01 | 87.0% | 93.7% |
| 2rbkA02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.51 | 43.0 | 3.60e-01 | 100.0% | 86.1% |
| 5o5cB02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.51 | 41.0 | 3.26e-01 | 96.3% | 43.0% |
| 4hw0C00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 42.0 | 3.65e-01 | 100.0% | 62.4% |
| 7xinA03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.51 | 42.0 | 3.46e-01 | 98.1% | 55.0% |
| 4obuA01 | 3.90.1150.170 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.51 | 42.0 | 2.84e-01 | 98.1% | 25.6% |
| 2xubA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 42.0 | 3.84e-01 | 100.0% | 74.4% |
| 2wnyA00 | 3.30.1440.10 | Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 | 0.51 | 37.0 | 2.95e-01 | 83.3% | 35.0% |
| 1js3A03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.50 | 41.0 | 3.49e-01 | 96.3% | 53.6% |
| 4c9yA00 | 1.10.10.1890 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ska1 microtubule binding domain-like | 0.50 | 40.0 | 3.20e-01 | 92.6% | 74.0% |
| 3l7wA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 40.0 | 3.45e-01 | 98.1% | 62.9% |
ECOD (87)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5027998 | 328.9.1.1 ↗ | a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain › SepF | 0.71 | 61.0 | 5.23e-01 | 100.0% | 66.7% |
| 3898070 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.71 | 61.0 | 5.65e-01 | 100.0% | 91.4% |
| 4292464 | 327.19.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › DNA mismatch repair protein MutL regulatory subdomain › DNA mismatch repair protein MutL regulatory subdomain › MutL_C | 0.70 | 50.0 | 4.41e-01 | 81.5% | 51.2% |
| 5060056 | 328.6.1.2 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › RTC | 0.70 | 57.0 | 3.74e-01 | 100.0% | 20.4% |
| 4070528 | 328.9.1.1 ↗ | a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain › SepF | 0.70 | 60.0 | 5.25e-01 | 100.0% | 65.9% |
| 5068786 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.68 | 51.0 | 4.23e-01 | 81.5% | 52.6% |
| 1883358 | 320.1.1.7 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › PUS7L_N | 0.68 | 57.0 | 5.55e-01 | 100.0% | 96.8% |
| 4099043 | 304.28.1.4 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › SecD_1st | 0.68 | 50.0 | 4.49e-01 | 79.6% | 66.7% |
| 4242475 | 304.28.1.4 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › SecD_1st | 0.67 | 51.0 | 4.47e-01 | 81.5% | 67.5% |
| 4027999 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.67 | 55.0 | 4.94e-01 | 100.0% | 64.7% |
| 4209732 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.67 | 50.0 | 4.18e-01 | 81.5% | 52.6% |
| 3182652 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.67 | 56.0 | 5.03e-01 | 100.0% | 85.0% |
| 3374543 | 2003.1.5.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_2 | 0.66 | 55.0 | 3.62e-01 | 100.0% | 36.5% |
| 4967025 | 328.1.1.0 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like | 0.66 | 54.0 | 4.00e-01 | 100.0% | 37.0% |
| 4025594 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.65 | 48.0 | 4.48e-01 | 81.5% | 62.9% |
| 3578641 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.64 | 47.0 | 4.38e-01 | 81.5% | 61.4% |
| 4997088 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.64 | 54.0 | 3.67e-01 | 100.0% | 40.2% |
| 4085907 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.64 | 53.0 | 3.33e-01 | 100.0% | 26.7% |
| 3737998 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.64 | 52.0 | 4.68e-01 | 100.0% | 71.8% |
| 3683636 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.63 | 52.0 | 4.78e-01 | 100.0% | 83.1% |
| 5023065 | 304.28.1.4 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › SecD_1st | 0.63 | 48.0 | 4.15e-01 | 83.3% | 60.0% |
| 1165035 | 320.1.1.2 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › HP1451_C | 0.63 | 53.0 | 4.98e-01 | 100.0% | 80.9% |
| 4180000 | 304.9.1.38 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › SET_assoc | 0.63 | 45.0 | 3.86e-01 | 81.5% | 46.7% |
| 5000126 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.63 | 52.0 | 3.81e-01 | 96.3% | 34.8% |
| 3676365 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.62 | 45.0 | 3.97e-01 | 79.6% | 54.1% |
| 5053948 | 328.9.1.0 ↗ | a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain | 0.62 | 50.0 | 4.74e-01 | 100.0% | 78.6% |
| 3877589 | 327.16.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system | 0.62 | 47.0 | 4.55e-01 | 83.3% | 73.3% |
| 3424438 | 304.9.1.47 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › DUF4283 | 0.61 | 46.0 | 3.80e-01 | 81.5% | 47.0% |
| 4156329 | 304.11.1.4 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase › FAS_AT_central | 0.60 | 44.0 | 3.99e-01 | 81.5% | 58.7% |
| 3290652 | 306.2.1.0 ↗ | a+b two layers › Glucose permease domain IIB-like › arginine repressor C terminal domain-related › C-terminal domain of arginine repressor | 0.60 | 52.0 | 4.46e-01 | 100.0% | 70.0% |
| 3741625 | 304.9.1.38 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › SET_assoc | 0.60 | 43.0 | 3.44e-01 | 81.5% | 36.5% |
| 3175020 | 304.9.1.38 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › SET_assoc | 0.60 | 44.0 | 3.80e-01 | 81.5% | 48.9% |
| 3721862 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 50.0 | 4.20e-01 | 98.1% | 95.0% |
| 3304324 | 101.1.2.106 ↗ | alpha arrays › HTH › HTH › winged helix domain › Tam41_Mmp37 | 0.59 | 50.0 | 3.83e-01 | 98.1% | 62.2% |
| 4029970 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.59 | 43.0 | 3.88e-01 | 81.5% | 58.7% |
| 4602324 | 2003.1.5.82 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 | 0.59 | 48.0 | 3.30e-01 | 100.0% | 43.0% |
| 3972123 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.59 | 43.0 | 3.62e-01 | 83.3% | 47.6% |
| 4098328 | 304.24.1.3 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_III | 0.59 | 43.0 | 3.56e-01 | 83.3% | 45.5% |
| 3164241 | 304.28.1.4 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › SecD_1st | 0.59 | 45.0 | 3.82e-01 | 83.3% | 68.9% |
| 4948575 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.59 | 51.0 | 3.84e-01 | 100.0% | 39.9% |
| 5027648 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.59 | 49.0 | 4.35e-01 | 100.0% | 72.9% |
| 4953143 | 328.4.1.1 ↗ | a+b two layers › IF3-like › YhbY-like › YhbY-like › CRS1_YhbY | 0.58 | 48.0 | 4.38e-01 | 100.0% | 72.5% |
| 3381288 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.58 | 42.0 | 3.75e-01 | 81.5% | 55.3% |
| 4523274 | 304.24.1.1 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_C | 0.58 | 42.0 | 2.98e-01 | 81.5% | 24.6% |
| 3280392 | 387.1.5.0 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like | 0.58 | 43.0 | 4.53e-01 | 81.5% | 97.8% |
| 3232266 | 304.9.1.84 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › PF28975 | 0.58 | 42.0 | 3.48e-01 | 79.6% | 41.0% |
| 4933496 | 304.120.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI | 0.58 | 41.0 | 3.88e-01 | 77.8% | 72.9% |
| 3056435 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.58 | 42.0 | 3.43e-01 | 79.6% | 58.2% |
| 5041064 | 305.2.1.1 ↗ | a+b two layers › DCoH-like › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin_4a | 0.58 | 46.0 | 3.90e-01 | 90.7% | 60.0% |
| 4575751 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.58 | 47.0 | 4.16e-01 | 100.0% | 70.0% |
| 3953208 | 305.2.1.1 ↗ | a+b two layers › DCoH-like › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin_4a | 0.57 | 45.0 | 3.82e-01 | 88.9% | 57.4% |
| 4976536 | 328.4.1.1 ↗ | a+b two layers › IF3-like › YhbY-like › YhbY-like › CRS1_YhbY | 0.57 | 46.0 | 4.02e-01 | 100.0% | 63.2% |
| 5041224 | 306.2.1.0 ↗ | a+b two layers › Glucose permease domain IIB-like › arginine repressor C terminal domain-related › C-terminal domain of arginine repressor | 0.57 | 48.0 | 4.23e-01 | 100.0% | 75.3% |
| 4263829 | 304.9.1.38 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › SET_assoc | 0.57 | 43.0 | 3.54e-01 | 81.5% | 44.0% |
| 4943581 | 328.4.1.0 ↗ | a+b two layers › IF3-like › YhbY-like › YhbY-like | 0.57 | 48.0 | 4.31e-01 | 100.0% | 68.8% |
| 5013983 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.57 | 47.0 | 3.80e-01 | 100.0% | 52.5% |
| 5036602 | 4955.1.1.0 ↗ | a+b two layers › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit | 0.57 | 48.0 | 4.25e-01 | 100.0% | 68.2% |
| 3594603 | 3012.1.1.0 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain | 0.57 | 48.0 | 4.02e-01 | 100.0% | 85.0% |
| 4238042 | 4354.1.1.1 ↗ | a+b two layers › TRCF domain › TRCF domain › TRCF domain › TRCF | 0.57 | 48.0 | 3.51e-01 | 98.1% | 38.1% |
| None | — | 0.57 | 44.0 | 2.74e-01 | 90.7% | 33.9% | |
| 3381636 | 304.120.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI | 0.57 | 41.0 | 3.55e-01 | 79.6% | 48.9% |
| 3262891 | 101.1.2.79 ↗ | alpha arrays › HTH › HTH › winged helix domain › RNA_pol_I_A49 | 0.56 | 47.0 | 4.48e-01 | 100.0% | 86.2% |
| 5043879 | 304.19.1.1 ↗ | a+b two layers › Alpha-beta plaits › eIF-2-alpha, C-terminal domain › eIF-2-alpha, C-terminal domain › EIF_2_alpha | 0.56 | 40.0 | 3.53e-01 | 81.5% | 56.7% |
| 4420323 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.55 | 47.0 | 4.04e-01 | 98.1% | 65.6% |
| 3344177 | 387.1.5.0 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like | 0.55 | 41.0 | 4.37e-01 | 81.5% | 95.6% |
| 3713330 | 305.2.1.1 ↗ | a+b two layers › DCoH-like › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin_4a | 0.55 | 44.0 | 3.48e-01 | 90.7% | 45.8% |
| 5048315 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.55 | 44.0 | 3.48e-01 | 100.0% | 40.0% |
| 3683127 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.55 | 46.0 | 4.63e-01 | 96.3% | 100.0% |
| 4091138 | 304.24.1.3 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_III | 0.55 | 39.0 | 3.47e-01 | 81.5% | 52.2% |
| 3548774 | 4012.4.1.1 ↗ | a+b two layers › SSHS domain › DPAGT1 insertion domain › DPAGT1 insertion domain › DPAGT1_ins | 0.55 | 41.0 | 4.33e-01 | 81.5% | 100.0% |
| 3927851 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 43.0 | 3.67e-01 | 94.4% | 69.0% |
| 1841042 | 3853.1.1.1 ↗ | a+b two layers › Oxalate Biosynthetic Component A (ObcA) insertion domains › Oxalate Biosynthetic Component A (ObcA) insertion domains › Oxalate Biosynthetic Component A (ObcA) insertion domains › ObcA_N | 0.54 | 37.0 | 3.96e-01 | 81.5% | 90.9% |
| 4968723 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 45.0 | 3.62e-01 | 100.0% | 45.0% |
| 4025551 | 304.24.1.3 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_III | 0.54 | 39.0 | 3.39e-01 | 81.5% | 47.4% |
| 3585079 | 304.24.1.1 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_C | 0.54 | 43.0 | 2.92e-01 | 88.9% | 29.8% |
| 3216083 | 4012.4.1.1 ↗ | a+b two layers › SSHS domain › DPAGT1 insertion domain › DPAGT1 insertion domain › DPAGT1_ins | 0.54 | 39.0 | 4.11e-01 | 79.6% | 97.8% |
| 3799483 | 101.1.2.122 ↗ | alpha arrays › HTH › HTH › winged helix domain › CSN8_PSD8_EIF3K | 0.53 | 40.0 | 4.13e-01 | 85.2% | 92.0% |
| 3784937 | 304.8.1.10 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_7 | 0.53 | 38.0 | 2.95e-01 | 83.3% | 56.0% |
| 4971049 | 101.1.2.55 ↗ | alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB | 0.53 | 43.0 | 3.92e-01 | 100.0% | 67.5% |
| 4995074 | 2006.1.1.11 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase_3 | 0.52 | 42.0 | 2.90e-01 | 96.3% | 27.6% |
| 4089543 | 304.24.1.21 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_C+EFG_III | 0.51 | 39.0 | 2.79e-01 | 88.9% | 32.0% |
| 4297519 | 304.14.1.1 ↗ | a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) › SPOR | 0.51 | 36.0 | 3.38e-01 | 79.6% | 78.4% |
| 5041631 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 42.0 | 4.25e-01 | 100.0% | 98.2% |
| 3516321 | 4012.4.1.1 ↗ | a+b two layers › SSHS domain › DPAGT1 insertion domain › DPAGT1 insertion domain › DPAGT1_ins | 0.51 | 36.0 | 3.72e-01 | 79.6% | 95.6% |
| 5050934 | 304.8.1.21 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_9 | 0.51 | 36.0 | 3.50e-01 | 81.5% | 69.2% |
| 4004621 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.50 | 38.0 | 3.86e-01 | 100.0% | 92.7% |
| 3988398 | 304.26.1.1 ↗ | a+b two layers › Alpha-beta plaits › MTH1187/YkoF-like › MTH1187/YkoF-like › Thiamine_BP | 0.50 | 38.0 | 3.28e-01 | 87.0% | 65.3% |